BDGP Sequence Production Resources |
Search the DGRC for LD30246
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 302 |
Well: | 46 |
Vector: | pOT2 |
Associated Gene/Transcript | CG12200-RA |
Protein status: | LD30246.pep: gold |
Preliminary Size: | 1103 |
Sequenced Size: | 947 |
Gene | Date | Evidence |
---|---|---|
CG12200 | 2001-01-01 | Release 2 assignment |
CG12200 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12200 | 2003-01-14 | Blastp of sequenced clone |
CG12200 | 2008-04-29 | Release 5.5 accounting |
CG12200 | 2008-08-15 | Release 5.9 accounting |
CG12200 | 2008-12-18 | 5.12 accounting |
947 bp (947 high quality bases) assembled on 2003-01-14
GenBank Submission: AY051777
> LD30246.complete AAAACTTGCAAGGCGAGGAAAAAAACATATATTGGTCACTATGTTTCGAG TGCATTGCAACAAGTGTTTCCGTCATCGCAAAACTGATCCAGCCGTGCCC TTCCACTTGACCCAGTGCCGGCACGTGATCTGCGGCCCCTGTTTGGGCCA ATCCTCGCTAGAAAAGAACTGCCCGCTATGCGGCCAGGTGCTCAAAGCGA TCCAGATCAACCGGGATATGCCAACTAGCGTGGCCAACTACTTCGCGGAT CCCCTGCGATTCCAGCAGATCTACCGCAAGATCTCCAAGTTCCAAGCGGA CCAGCGAGCATCGGACAACCTGGGTTTCTACCGTCAGTTGCAGCAGCTGG AGCAAAACAAGCGCCAGCTGGAGGGCTTTTGCAAGATGGAGGCGCAGCTG AACCAGAAGGTCGTGGAGGAAAAGAAGCGAATCGCTGAATTGCGCACCTA CATCGCTTACCACGAGAATGCGCAGAGGATGACGAGGCGCCGGCACAGTG CAGGTGAGAGATTCCATACGCCGGAGTTCAAGGAGGCCTGGAACACCTCT ATCAGCACTTCGGACAAATCGCCGTCGGATATGCCTTCTGATAGCTCCCG CCGGTCCGCGGACTTGGATACCCAGTCAACGCGGAGAAGATCTTTTGGCA GCGACACTAAAGGCTTTCGTCTTTAGTCACTCCAATTACTTGTATAATTT TTTATAGGAATTCTAAGACTATAACCACTTCTAACGATTCAATTAGGTTT TGACCTTCCAGAAGATTCCCAATATAAAGAACCAGATAGATTATTAAGTT GCGCTTAAGGTACTAATTATCATCCGTATTCTATTACTATTACTATTCAA ATCGAGACGTTCCACTACTCATGTGCGGGATATGATAACCATAAACGGAA ATATAACAATCTACTTTAGCTTACAAAACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12200-RA | 928 | CG12200-RA | 1..928 | 1..928 | 4640 | 100 | Plus |
CG31053-RA | 820 | CG31053-RA | 207..431 | 229..453 | 450 | 80 | Plus |
nc_19648.a | 879 | nc_19648.a | 518..742 | 453..229 | 450 | 80 | Minus |
CG31053-RA | 820 | CG31053-RA | 78..159 | 100..181 | 170 | 80.4 | Plus |
nc_19648.a | 879 | nc_19648.a | 790..871 | 181..100 | 170 | 80.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 19483225..19484160 | 1..936 | 4650 | 99.7 | Plus |
3R | 31820162 | 3R | 27668575..27668799 | 453..229 | 450 | 80 | Minus |
3R | 31820162 | 3R | 27668847..27668928 | 181..100 | 170 | 80.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 19363905..19364833 | 1..929 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12200-RA | 1..636 | 41..676 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12200-RA | 1..636 | 41..676 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12200-RA | 1..636 | 41..676 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12200-RA | 1..636 | 41..676 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12200-RA | 1..636 | 41..676 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12200-RA | 1..928 | 1..928 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12200-RA | 1..929 | 1..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12200-RA | 65..993 | 1..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12200-RA | 1..928 | 1..928 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12200-RA | 65..993 | 1..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19475127..19476055 | 1..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19475127..19476055 | 1..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19475127..19476055 | 1..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 19369160..19370088 | 1..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19483225..19484153 | 1..929 | 100 | Plus |
Translation from 0 to 675
> LD30246.hyp KLARRGKKHILVTMFRVHCNKCFRHRKTDPAVPFHLTQCRHVICGPCLGQ SSLEKNCPLCGQVLKAIQINRDMPTSVANYFADPLRFQQIYRKISKFQAD QRASDNLGFYRQLQQLEQNKRQLEGFCKMEAQLNQKVVEEKKRIAELRTY IAYHENAQRMTRRRHSAGERFHTPEFKEAWNTSISTSDKSPSDMPSDSSR RSADLDTQSTRRRSFGSDTKGFRL*
Translation from 40 to 675
> LD30246.pep MFRVHCNKCFRHRKTDPAVPFHLTQCRHVICGPCLGQSSLEKNCPLCGQV LKAIQINRDMPTSVANYFADPLRFQQIYRKISKFQADQRASDNLGFYRQL QQLEQNKRQLEGFCKMEAQLNQKVVEEKKRIAELRTYIAYHENAQRMTRR RHSAGERFHTPEFKEAWNTSISTSDKSPSDMPSDSSRRSADLDTQSTRRR SFGSDTKGFRL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23233-PA | 228 | GF23233-PA | 5..146 | 1..142 | 385 | 46.5 | Plus |
Dana\GF22805-PA | 207 | GF22805-PA | 1..207 | 1..194 | 355 | 39.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19224-PA | 209 | GG19224-PA | 1..209 | 1..211 | 885 | 78.7 | Plus |
Dere\GG12083-PA | 219 | GG12083-PA | 1..219 | 1..211 | 565 | 51.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19167-PA | 207 | GH19167-PA | 1..141 | 1..142 | 341 | 45.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12200-PA | 211 | CG12200-PA | 1..211 | 1..211 | 1122 | 100 | Plus |
CG31053-PA | 219 | CG31053-PA | 1..219 | 1..211 | 555 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23272-PA | 230 | GI23272-PA | 1..143 | 1..142 | 329 | 44.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23882-PA | 232 | GL23882-PA | 1..142 | 1..142 | 493 | 62 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15968-PA | 232 | GA15968-PA | 1..142 | 1..142 | 491 | 61.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16310-PA | 218 | GM16310-PA | 1..218 | 1..211 | 568 | 49.3 | Plus |
Dsec\GM24394-PA | 218 | GM24394-PA | 1..218 | 1..211 | 568 | 49.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24872-PA | 211 | GD24872-PA | 1..211 | 1..211 | 1060 | 92.9 | Plus |
Dsim\GD18048-PA | 219 | GD18048-PA | 1..219 | 1..211 | 575 | 48.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10772-PA | 172 | GJ10772-PA | 1..83 | 60..142 | 202 | 50.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19085-PA | 217 | GK19085-PA | 1..142 | 1..144 | 336 | 42.8 | Plus |