BDGP Sequence Production Resources |
Search the DGRC for LD30288
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 302 |
Well: | 88 |
Vector: | pOT2 |
Associated Gene/Transcript | CG11658-RA |
Protein status: | LD30288.pep: gold |
Preliminary Size: | 2102 |
Sequenced Size: | 2015 |
Gene | Date | Evidence |
---|---|---|
CG11658 | 2002-01-01 | Sim4 clustering to Release 2 |
CG11658 | 2002-05-02 | Blastp of sequenced clone |
CG11658 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11658 | 2008-04-29 | Release 5.5 accounting |
CG11658 | 2008-08-15 | Release 5.9 accounting |
CG11658 | 2008-12-18 | 5.12 accounting |
2015 bp (2015 high quality bases) assembled on 2002-05-02
GenBank Submission: AY102690
> LD30288.complete AACGAGTGCTTAGTTTTCCTCGATTTGGGGCCCTGCGGAATTGGCAGTTC ACTTTCGTTGGTGGCTCGAGTGCGACGTGAAGTGCGGCAGCGAAGAGCGC TTTTCCAGGCACAGTGCGCCACTACTTGCCTGCAAGTCAGCCACAGCAAT TTCTCGGTAATTGCGTTGCAAATTAAATCAAACGCGTTTCGTCAACCGCC GTCCGCTTAGGCAAAAAAAAGTAAACAAACAATACAAATCTACACTCTCA CGCGAAAAACAATAAAGCGATCGTTCGGAAATTAGTGCAACGTAGACAAA GGCAACTCAATCCGCATCCAGATCCACAAAAGATGGCGTTCATTTCGAAA GACTTTCGGTCGCCGGGGGAAACTTGGATCAAAACCGATGGCGGCTGGGA GCGTTCCAAGGTGCTCGAGTGCGGCGGAAAGCGGAAGCGGCACCATTCAG AGGGCAGCAGCAGCTACCAGGACAGCGACAGTTCGGAGGAGGAGGCGGTG ATGCCGCCGCATTATCACATCACCATCCGGTGTACCAGAGAGATAGCCGG GTTTAATGGTCTCAGTGAGGCTGTGAAGCGTCTGGATTTCAGGCGATCTG TGCGGGATCGCAAGCGGTTCCACTACATATGCGCCTTCCTGCTGCTCGTG TCCAACAAGGGTATTGCCAGTCTGCCAGGCAGTGCTCAGCGCCAGCTACT CCAAATGGTCGAGGAGGTGGCCTCGCATGTAAATGACAGCCAGCAGCATC CGAATGTGCTGCGCGGCCTGGCCCTGAAGCTGGAGCACATTGTCAGCCAA GAGAACCAGAAGTGCTGGGGCAAGCCGCTGGGCAGCACGTACCTGTGGAA GGAGCACATGGCCACCATCAAGCGCATCCAGCGCGTGGCCAGCCAGATCG AAATCCGCGAGCCCGATCCGGAGGCCAAGCCAAAGCTGCACGAACTGCCG GAGGAGTGTGTGCGGGAGATCATCCTGTGCATAGCCGACCATCGGGACCT GGAGTCGGCCGCCGAGGCCTGGGAGACCATGGCCAAGCTGGTATCCGAGC AGCGCATCTGGCGCGAACTGACACGCTTTCACTTCAACCAGCGCCAGATC CACACCATTCTGGACCTGGACAAGTTTAAGCAGATGGGCGAGATCAAGGA CTGGAAGCAGATCTATCATCAACTACGACGCACCTATGGCGTCAACGATG ATTACCAGTTCGCCGAGGTGCTGGCCCTGTGCCGCTCCTGCTGCTGCCTG TTCTGGCCGTCGGATGGACACCCGTGCATCGTCGATCAGAGTCCGGACTA CAAGCAGCGGCTTGAGGAGGCCGGTGGTCAGTTGGCTCTGGCCCAACCAG TTCCGCCCGCCCAGTTTCTTAAGTACTTCTCGTTGTAAGCCGGATGTTCG GACCAAGGGAGAGAGATAGAGATAGATCGAAAGTATTTTTACGGCCCAGT GGATAGGTTGTTTATGCGTGTGTTAAAGTTTTACCCTTGGAGAGAAGAAA AGGAGCAGGGGAGGAGAGGAGTTGATAGTCGAGGAGCGGATCAGAAAAAG CAAAGTGATAACGAAATCCCTAATCTATACCTACATACGTTTAAACGTAA ATCGCCAGACTCGTTTCGATTGGTTTGCAGTTTGTCCACGGTTAAGGACG TGGTTTCAGTTCAGTTGTTTGCCAACCAGTTGTATTACCACATCAGCAAT CTGTGCAGGACCGAAGATTACTATTAGTTGTGTAGACATACATACATATT TATCTATCGACTCGCGCGTGTCAGTTGCCAGGGTCCAATTCTGGGTCGCT AATCTTTGGGGTCGGATTTAGGTATTTAGGACACGCAAAACGAACTGCCA CAAAACGAGAATAAGCGAATATTTTTTGTCAAACTGATTATTGCAAAACG TGTATCGAGAAACTATTTTTAATGTACACCAGTATGTATAATTACCGATT TGTTCATTTTTTGAGACAAAACGAGAAATACACTTTTATGAATGAAAAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11658-RA | 2050 | CG11658-RA | 54..2048 | 1..1995 | 9975 | 100 | Plus |
CG11658.b | 2694 | CG11658.b | 54..2048 | 1..1995 | 9975 | 100 | Plus |
CG11658-RD | 2130 | CG11658-RD | 306..2128 | 173..1995 | 9115 | 100 | Plus |
CG11658-RD | 2130 | CG11658-RD | 50..221 | 1..172 | 860 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 11690989..11692071 | 1994..910 | 5270 | 99.3 | Minus |
chr3L | 24539361 | chr3L | 11692380..11692670 | 729..439 | 1455 | 100 | Minus |
chr3L | 24539361 | chr3L | 11698197..11698464 | 440..173 | 1310 | 99.3 | Minus |
chr3L | 24539361 | chr3L | 11692136..11692318 | 911..729 | 915 | 100 | Minus |
chr3L | 24539361 | chr3L | 11699286..11699457 | 172..1 | 845 | 99.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 11700090..11701175 | 1995..910 | 5430 | 100 | Minus |
3L | 28110227 | 3L | 11701482..11701772 | 729..439 | 1455 | 100 | Minus |
3L | 28110227 | 3L | 11707304..11707571 | 440..173 | 1340 | 100 | Minus |
3L | 28110227 | 3L | 11701238..11701420 | 911..729 | 915 | 100 | Minus |
3L | 28110227 | 3L | 11708392..11708563 | 172..1 | 860 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 11693190..11694275 | 1995..910 | 5430 | 100 | Minus |
3L | 28103327 | 3L | 11694582..11694872 | 729..439 | 1455 | 100 | Minus |
3L | 28103327 | 3L | 11700404..11700671 | 440..173 | 1340 | 100 | Minus |
3L | 28103327 | 3L | 11694338..11694520 | 911..729 | 915 | 100 | Minus |
3L | 28103327 | 3L | 11701492..11701663 | 172..1 | 860 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 11699286..11699457 | 1..172 | 99 | Minus | |
chr3L | 11698198..11698464 | 173..439 | 99 | <- | Minus |
chr3L | 11690989..11692069 | 912..1994 | 99 | <- | Minus |
chr3L | 11692136..11692317 | 730..911 | 100 | <- | Minus |
chr3L | 11692380..11692669 | 440..729 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11658-RC | 1..1056 | 333..1388 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11658-RC | 1..1056 | 333..1388 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11658-RC | 1..1056 | 333..1388 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11658-RC | 1..1056 | 333..1388 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11658-RC | 1..1056 | 333..1388 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11658-RA | 1..1994 | 1..1994 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11658-RA | 1..1994 | 1..1994 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11658-RA | 1..1984 | 11..1994 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11658-RA | 1..1994 | 1..1994 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11658-RA | 1..1984 | 11..1994 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11700091..11701173 | 912..1994 | 100 | <- | Minus |
3L | 11701238..11701419 | 730..911 | 100 | <- | Minus |
3L | 11701482..11701771 | 440..729 | 100 | <- | Minus |
3L | 11707305..11707571 | 173..439 | 100 | <- | Minus |
3L | 11708392..11708563 | 1..172 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11700091..11701173 | 912..1994 | 100 | <- | Minus |
3L | 11701238..11701419 | 730..911 | 100 | <- | Minus |
3L | 11701482..11701771 | 440..729 | 100 | <- | Minus |
3L | 11707305..11707571 | 173..439 | 100 | <- | Minus |
3L | 11708392..11708563 | 1..172 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11700091..11701173 | 912..1994 | 100 | <- | Minus |
3L | 11701238..11701419 | 730..911 | 100 | <- | Minus |
3L | 11701482..11701771 | 440..729 | 100 | <- | Minus |
3L | 11707305..11707571 | 173..439 | 100 | <- | Minus |
3L | 11708392..11708563 | 1..172 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 11693191..11694273 | 912..1994 | 100 | <- | Minus |
arm_3L | 11694338..11694519 | 730..911 | 100 | <- | Minus |
arm_3L | 11694582..11694871 | 440..729 | 100 | <- | Minus |
arm_3L | 11700405..11700671 | 173..439 | 100 | <- | Minus |
arm_3L | 11701492..11701663 | 1..172 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11693191..11694273 | 912..1994 | 100 | <- | Minus |
3L | 11694338..11694519 | 730..911 | 100 | <- | Minus |
3L | 11694582..11694871 | 440..729 | 100 | <- | Minus |
3L | 11700405..11700671 | 173..439 | 100 | <- | Minus |
3L | 11701492..11701663 | 1..172 | 100 | Minus |
Translation from 332 to 1387
> LD30288.pep MAFISKDFRSPGETWIKTDGGWERSKVLECGGKRKRHHSEGSSSYQDSDS SEEEAVMPPHYHITIRCTREIAGFNGLSEAVKRLDFRRSVRDRKRFHYIC AFLLLVSNKGIASLPGSAQRQLLQMVEEVASHVNDSQQHPNVLRGLALKL EHIVSQENQKCWGKPLGSTYLWKEHMATIKRIQRVASQIEIREPDPEAKP KLHELPEECVREIILCIADHRDLESAAEAWETMAKLVSEQRIWRELTRFH FNQRQIHTILDLDKFKQMGEIKDWKQIYHQLRRTYGVNDDYQFAEVLALC RSCCCLFWPSDGHPCIVDQSPDYKQRLEEAGGQLALAQPVPPAQFLKYFS L*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24522-PA | 390 | GF24522-PA | 1..390 | 1..351 | 1727 | 84.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13895-PA | 351 | GG13895-PA | 1..351 | 1..351 | 1883 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16387-PA | 364 | GH16387-PA | 1..364 | 1..351 | 1676 | 86.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11658-PE | 351 | CG11658-PE | 1..351 | 1..351 | 1879 | 100 | Plus |
CG11658-PD | 351 | CG11658-PD | 1..351 | 1..351 | 1879 | 100 | Plus |
CG11658-PC | 351 | CG11658-PC | 1..351 | 1..351 | 1879 | 100 | Plus |
CG11658-PB | 351 | CG11658-PB | 1..351 | 1..351 | 1879 | 100 | Plus |
CG11658-PA | 351 | CG11658-PA | 1..351 | 1..351 | 1879 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11581-PA | 360 | GI11581-PA | 1..360 | 1..351 | 1716 | 89.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16340-PA | 434 | GL16340-PA | 116..434 | 37..351 | 1578 | 93.1 | Plus |
Dper\GL16340-PA | 434 | GL16340-PA | 1..52 | 1..52 | 183 | 63.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11124-PA | 355 | GA11124-PA | 1..355 | 1..351 | 1755 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24720-PA | 351 | GM24720-PA | 1..351 | 1..351 | 1886 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12782-PA | 351 | GD12782-PA | 1..351 | 1..351 | 1889 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11260-PA | 354 | GJ11260-PA | 1..354 | 1..351 | 1739 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12401-PA | 363 | GK12401-PA | 1..363 | 1..351 | 1550 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20186-PA | 351 | GE20186-PA | 1..351 | 1..351 | 1889 | 100 | Plus |
Translation from 332 to 1387
> LD30288.hyp MAFISKDFRSPGETWIKTDGGWERSKVLECGGKRKRHHSEGSSSYQDSDS SEEEAVMPPHYHITIRCTREIAGFNGLSEAVKRLDFRRSVRDRKRFHYIC AFLLLVSNKGIASLPGSAQRQLLQMVEEVASHVNDSQQHPNVLRGLALKL EHIVSQENQKCWGKPLGSTYLWKEHMATIKRIQRVASQIEIREPDPEAKP KLHELPEECVREIILCIADHRDLESAAEAWETMAKLVSEQRIWRELTRFH FNQRQIHTILDLDKFKQMGEIKDWKQIYHQLRRTYGVNDDYQFAEVLALC RSCCCLFWPSDGHPCIVDQSPDYKQRLEEAGGQLALAQPVPPAQFLKYFS L*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11658-PE | 351 | CG11658-PE | 1..351 | 1..351 | 1879 | 100 | Plus |
CG11658-PD | 351 | CG11658-PD | 1..351 | 1..351 | 1879 | 100 | Plus |
CG11658-PC | 351 | CG11658-PC | 1..351 | 1..351 | 1879 | 100 | Plus |
CG11658-PB | 351 | CG11658-PB | 1..351 | 1..351 | 1879 | 100 | Plus |
CG11658-PA | 351 | CG11658-PA | 1..351 | 1..351 | 1879 | 100 | Plus |