Clone LD30319 Report

Search the DGRC for LD30319

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:303
Well:19
Vector:pOT2
Associated Gene/TranscriptGit-RA
Protein status:LD30319.pep: gold
Preliminary Size:2423
Sequenced Size:2530

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG16728 2001-01-01 Release 2 assignment
CG16728 2001-10-10 Blastp of sequenced clone
CG16728 2003-01-01 Sim4 clustering to Release 3
CG16728 2008-04-29 Release 5.5 accounting
CG16728 2008-08-15 Release 5.9 accounting
CG16728 2008-12-18 5.12 accounting

Clone Sequence Records

LD30319.complete Sequence

2530 bp (2530 high quality bases) assembled on 2001-10-10

GenBank Submission: AY061380

> LD30319.complete
GTGCGCAAAATAACTAAAACAAACTCGGAAAAGGCGTCCGCAAATGTTTT
CTTCTGCTGCTCCCCGCGTTTAATTAAAACTTGTGAGCGTCTTGGAATGC
TGAATGTGTTTCGCCAGCAGTATAATCGAAGCGCACAGGAAGTTATTTAT
AGCGCCGCCGGATTTGGATCATTCCGATCCAGCCACACCCACGATTTCGA
CCAGATCCAAAATGCCGAGGGGGAAATCCCGCCTGCAAACCGAAGTTTGT
GGCGATTGCGGAGCTGGTGATCCATCCTGGGCGAGCATCAACCGGGGCAT
CCTTCTCTGCGCCGACTGCTGTTCGGTGCACCGCAGTCTGGGCAGGCACA
TCTCCATTGTGAAGTCTCTACGCCAGGGTAACTGGGAGCCCTCGGTTCTG
AACTTTGTGAACTCTCTAAACGCCCATGGAGCCAATAGTGTTTGGGAGCA
TCATCTGCTGGATGGCAGCACCAACTCCACCGGCGGAAAGCACGTGCCAC
GCTGGCGGAAACCCACGCCCAAGGATGCACTCCATCCCACCAAATCCGAT
TTTATTAAGGCCAAGCATGTGAATCTAACGTTCGTGCTAAAACCCAGTCT
CCAGGATGACGATGATGGCAATGGCTCAGCGGGCTGTCTGGAACAGGAGC
TGAGTAGACAGCTCCATGCCAGCGTGCGGACCAGCAATCTAGAGACTTCA
CTGCGCTTCTTGGTCCAGGGTGCAGACCCAAATTACTACCACGAGGACAA
GCTATCAACGCCACTTCACATGGCCGCCAAGTTTGGCCAGGCATCACAAA
TCGAGATGCTGCTCATCTATGGAGCCGATGTGAATGCCTTGGATGGCAAT
GGGATGACTCCTCTGGAACTGGCCAGGGCCAACAATCATAACACCATCGC
CGAAAGACTGCTTGATGCCATGTACGATGTCACCGACAGGATCATTACCT
TCCTAGGTGGCAAGAAGCCAGATCATGCGAGTGGCCGCCACATGATTATT
CCGGATGCCAATGGCGCGGACATAAGCGAGCAACTGAAGATTGCACGTGG
AAAGTTGCAACTCGTGCCAAATAAGATGTTTGAGGAGCTGGTCATGGACC
TATACGATGAGGTGGACAGACGCGAGTGCGAAGCCATCTGGTCGACAAGC
ACCCTGAATGCTGATCATGCAACTGTGCCATTTTTGCCGGCTAATCCATT
TTTGAGCGCCACGCGCAATCAGGGTCGTCAGAAATTGGCACGCTTCAATC
GCGCCGAGTTCACTGGTCTCTTGACCGACGTGCTCGTCGATGCTATGCGA
CGCCAGAATATGGCCAACCTGCGTCCAATGGATGCCCCAGTGGCCGGGCA
CCAGTCGCTGCAATCGCTGCCGTATGCCAACAACTCAATGCTGCTCGGCT
CGTTCGAGCAGGGCGGTCATGATCCGAATCTGTCGGACGACGAGCCCATT
TATGATCCGGTGGCCAGCGATGACGACTATGCCCCAGTGCCACCAATGGC
CCAGCAGGCCATTGTGCATACGCCACCGCGCAGCGCGAATTCGCACAACG
AAATGGAAACGCTGCGCAAACAGCTGAACGATTACAAATCGGAGATCAAT
CAGCTAAAGAACGTGGTGCAGATGCTGTCCAGCGAGAACACGCAGCTCAA
GTCCAAGTTCTCGAGCGCATCGAACAACAGCGTGTACGATGAGCCACTTC
GCATTGATCTGAGCTTGAGCAGTCCGGATACAGAGCACGAGCCTCTGTCG
CTACCCGAAGGTGGGACTGCCAATGGGGAAAGCGGCTCCTCCAATGATTC
GTCAAATCAATCGACCATCAAGCGTCCAGCCAGCATGTACGAGCGTCGTT
TGGTACCCAATGTGGCCAAGGGCAATACGGACATACGAAATACGACCAGC
ATGTACCAAATGGCTGGGGATGGCAAACCTTTTGGTGAGGAGGTCAAAGT
GCGCTCTGACTTGGTCACACGCCGTCTTAAGGAGCTCATAAGAGCTATGC
AGCCAGTGCCAGAGGATCAAAAGCAGTCGATTGCTCCACATGGAGAGCTT
ATACGAAGTGCCGTGACTGATTTAATTGCCCTTTATGCCAATTTGCCACC
GAATGCCAGTGACCCGTCTCGCGAAACCCTTAAACTGCTAACCCGCCAGA
ACATTCTCATCCAGCACGAGTGCGAGAATCTGCAGAAAGCCATCGAGGCG
GATGACAAGCAGGCCATACAGAAGAACACCTTGGAGGTGCGCGACTGCGC
CTTCCACATTGCCAGTGCCATAAAGACTTTGGTGTTGCAGTTCTATTGAG
ACGCCCAAAACACAATCATCGACATAGAAGTTTAAACTCACTCACTCTTT
TTTGAAGTATTAACCGACCACTTTAGTGCCCTGCTGACTAACAAAAGTGC
TTCCGCCAAATAATTTAAAGAATCCCCTTTACATATAGTTTATGTATTTA
ATAAATGTTTACATAAATCAATGTACTTCGTTCAATATCCCCAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

LD30319.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:13:07
Subject Length Description Subject Range Query Range Score Percent Strand
Git-RA 2722 Git-RA 196..2691 1..2496 12450 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 01:06:43
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 6531842..6532741 979..80 4500 100 Minus
chrX 22417052 chrX 17684352..17684863 1507..2018 2485 99 Plus
chr2R 21145070 chr2R 6529864..6530260 2095..1699 1985 100 Minus
chr2R 21145070 chr2R 6529409..6529802 2488..2095 1970 100 Minus
chr2R 21145070 chr2R 6530896..6531184 1508..1220 1445 100 Minus
chr2R 21145070 chr2R 6530333..6530525 1698..1506 965 100 Minus
chr2R 21145070 chr2R 6531393..6531550 1136..979 790 100 Minus
chr2R 21145070 chr2R 6531243..6531329 1223..1137 435 100 Minus
chr2R 21145070 chr2R 6532925..6533003 79..1 395 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:23:49 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 01:06:41
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10644255..10645154 979..80 4500 100 Minus
X 23542271 X 17795057..17795568 1507..2018 2485 99 Plus
2R 25286936 2R 10642277..10642673 2095..1699 1985 100 Minus
2R 25286936 2R 10641814..10642215 2496..2095 1980 99.5 Minus
2R 25286936 2R 10643309..10643597 1508..1220 1445 100 Minus
2R 25286936 2R 10642746..10642938 1698..1506 965 100 Minus
2R 25286936 2R 10643806..10643963 1136..979 790 100 Minus
2R 25286936 2R 10643656..10643742 1223..1137 435 100 Minus
2R 25286936 2R 10645338..10645416 79..1 395 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:36:59
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 10645454..10646353 979..80 4500 100 Minus
X 23527363 X 17803155..17803666 1507..2018 2485 99 Plus
2R 25260384 2R 10643476..10643872 2095..1699 1985 100 Minus
2R 25260384 2R 10643013..10643414 2496..2095 1980 99.5 Minus
2R 25260384 2R 10644508..10644796 1508..1220 1445 100 Minus
2R 25260384 2R 10643945..10644137 1698..1506 965 100 Minus
2R 25260384 2R 10645005..10645162 1136..979 790 100 Minus
2R 25260384 2R 10644855..10644941 1223..1137 435 100 Minus
2R 25260384 2R 10646537..10646615 79..1 395 100 Minus
Blast to na_te.dros performed 2019-03-16 01:06:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dmir\worf 4174 Dmir\worf WORF 4174bp Derived from AY144572. 4127..4171 2428..2472 126 75.6 Plus
GATE 8507 GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). 1182..1239 2487..2428 124 70 Minus
Max-element 8556 Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). 1040..1105 2408..2473 123 65.2 Plus

LD30319.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 01:07:33 Download gff for LD30319.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 6529405..6529801 2096..2492 99 <- Minus
chr2R 6529864..6530260 1699..2095 100 <- Minus
chr2R 6530333..6530523 1508..1698 100 <- Minus
chr2R 6530897..6531181 1223..1507 100 <- Minus
chr2R 6531244..6531329 1137..1222 100 <- Minus
chr2R 6531393..6531549 980..1136 100 <- Minus
chr2R 6531842..6532741 80..979 100 <- Minus
chr2R 6532925..6533003 1..79 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:11:07 Download gff for LD30319.complete
Subject Subject Range Query Range Percent Splice Strand
CG16728-RA 1..2196 104..2299 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:53:16 Download gff for LD30319.complete
Subject Subject Range Query Range Percent Splice Strand
Git-RA 1..2196 104..2299 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:02:15 Download gff for LD30319.complete
Subject Subject Range Query Range Percent Splice Strand
Git-RA 1..2196 104..2299 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:22:13 Download gff for LD30319.complete
Subject Subject Range Query Range Percent Splice Strand
CG16728-RA 1..2196 104..2299 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:23:26 Download gff for LD30319.complete
Subject Subject Range Query Range Percent Splice Strand
Git-RA 1..2196 104..2299 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:38:17 Download gff for LD30319.complete
Subject Subject Range Query Range Percent Splice Strand
CG16728-RA 1..2492 1..2492 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:53:15 Download gff for LD30319.complete
Subject Subject Range Query Range Percent Splice Strand
Git-RA 5..2496 1..2492 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:02:15 Download gff for LD30319.complete
Subject Subject Range Query Range Percent Splice Strand
Git-RA 12..2503 1..2492 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:22:13 Download gff for LD30319.complete
Subject Subject Range Query Range Percent Splice Strand
CG16728-RA 1..2492 1..2492 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:23:26 Download gff for LD30319.complete
Subject Subject Range Query Range Percent Splice Strand
Git-RA 12..2503 1..2492 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:07:33 Download gff for LD30319.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10645338..10645416 1..79 100   Minus
2R 10643310..10643594 1223..1507 100 <- Minus
2R 10643657..10643742 1137..1222 100 <- Minus
2R 10643806..10643962 980..1136 100 <- Minus
2R 10644255..10645154 80..979 100 <- Minus
2R 10641818..10642214 2096..2492 99 <- Minus
2R 10642277..10642673 1699..2095 100 <- Minus
2R 10642746..10642936 1508..1698 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:07:33 Download gff for LD30319.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10645338..10645416 1..79 100   Minus
2R 10643310..10643594 1223..1507 100 <- Minus
2R 10643657..10643742 1137..1222 100 <- Minus
2R 10643806..10643962 980..1136 100 <- Minus
2R 10644255..10645154 80..979 100 <- Minus
2R 10641818..10642214 2096..2492 99 <- Minus
2R 10642277..10642673 1699..2095 100 <- Minus
2R 10642746..10642936 1508..1698 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:07:33 Download gff for LD30319.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10645338..10645416 1..79 100   Minus
2R 10643310..10643594 1223..1507 100 <- Minus
2R 10643657..10643742 1137..1222 100 <- Minus
2R 10643806..10643962 980..1136 100 <- Minus
2R 10644255..10645154 80..979 100 <- Minus
2R 10641818..10642214 2096..2492 99 <- Minus
2R 10642277..10642673 1699..2095 100 <- Minus
2R 10642746..10642936 1508..1698 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:02:15 Download gff for LD30319.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6529323..6529719 2096..2492 99 <- Minus
arm_2R 6529782..6530178 1699..2095 100 <- Minus
arm_2R 6530251..6530441 1508..1698 100 <- Minus
arm_2R 6530815..6531099 1223..1507 100 <- Minus
arm_2R 6531162..6531247 1137..1222 100 <- Minus
arm_2R 6531311..6531467 980..1136 100 <- Minus
arm_2R 6531760..6532659 80..979 100 <- Minus
arm_2R 6532843..6532921 1..79 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:59:20 Download gff for LD30319.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10643017..10643413 2096..2492 99 <- Minus
2R 10643476..10643872 1699..2095 100 <- Minus
2R 10643945..10644135 1508..1698 100 <- Minus
2R 10644509..10644793 1223..1507 100 <- Minus
2R 10644856..10644941 1137..1222 100 <- Minus
2R 10645005..10645161 980..1136 100 <- Minus
2R 10645454..10646353 80..979 100 <- Minus
2R 10646537..10646615 1..79 100   Minus

LD30319.pep Sequence

Translation from 103 to 2298

> LD30319.pep
MCFASSIIEAHRKLFIAPPDLDHSDPATPTISTRSKMPRGKSRLQTEVCG
DCGAGDPSWASINRGILLCADCCSVHRSLGRHISIVKSLRQGNWEPSVLN
FVNSLNAHGANSVWEHHLLDGSTNSTGGKHVPRWRKPTPKDALHPTKSDF
IKAKHVNLTFVLKPSLQDDDDGNGSAGCLEQELSRQLHASVRTSNLETSL
RFLVQGADPNYYHEDKLSTPLHMAAKFGQASQIEMLLIYGADVNALDGNG
MTPLELARANNHNTIAERLLDAMYDVTDRIITFLGGKKPDHASGRHMIIP
DANGADISEQLKIARGKLQLVPNKMFEELVMDLYDEVDRRECEAIWSTST
LNADHATVPFLPANPFLSATRNQGRQKLARFNRAEFTGLLTDVLVDAMRR
QNMANLRPMDAPVAGHQSLQSLPYANNSMLLGSFEQGGHDPNLSDDEPIY
DPVASDDDYAPVPPMAQQAIVHTPPRSANSHNEMETLRKQLNDYKSEINQ
LKNVVQMLSSENTQLKSKFSSASNNSVYDEPLRIDLSLSSPDTEHEPLSL
PEGGTANGESGSSNDSSNQSTIKRPASMYERRLVPNVAKGNTDIRNTTSM
YQMAGDGKPFGEEVKVRSDLVTRRLKELIRAMQPVPEDQKQSIAPHGELI
RSAVTDLIALYANLPPNASDPSRETLKLLTRQNILIQHECENLQKAIEAD
DKQAIQKNTLEVRDCAFHIASAIKTLVLQFY*

LD30319.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 09:40:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11095-PA 693 GF11095-PA 1..693 37..731 3373 92 Plus
Dana\GF14267-PA 932 GF14267-PA 654..846 49..259 229 32.4 Plus
Dana\GF12215-PA 507 GF12215-PA 28..151 47..186 172 31.4 Plus
Dana\GF16981-PA 824 GF16981-PA 396..497 49..161 169 36.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 09:40:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22727-PA 726 GG22727-PA 1..726 1..731 3792 96.9 Plus
Dere\GG23894-PA 927 GG23894-PA 649..841 49..259 223 31.9 Plus
Dere\GG11190-PA 828 GG11190-PA 396..497 49..161 175 36.3 Plus
Dere\GG23397-PA 513 GG23397-PA 31..154 47..186 172 32.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 09:40:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20619-PA 698 GH20619-PA 1..698 37..731 3172 87 Plus
Dgri\GH11734-PA 254 GH11734-PA 1..254 484..731 1029 79.5 Plus
Dgri\GH24972-PA 152 GH24972-PA 1..151 223..373 762 92.1 Plus
Dgri\GH11124-PA 948 GH11124-PA 666..857 49..259 213 30.2 Plus
Dgri\GH23954-PA 847 GH23954-PA 395..496 49..161 185 38.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:41:14
Subject Length Description Subject Range Query Range Score Percent Strand
Git-PA 731 CG16728-PA 1..731 1..731 3801 100 Plus
CenG1A-PC 763 CG31811-PC 485..677 49..259 223 30.7 Plus
CenG1A-PA 927 CG31811-PA 649..841 49..259 223 30.7 Plus
CenG1A-PB 995 CG31811-PB 717..909 49..259 223 30.7 Plus
CG8243-PA 517 CG8243-PA 33..154 49..186 170 31.9 Plus
CenB1A-PB 598 CG6742-PB 166..267 49..161 163 36.3 Plus
CenB1A-PA 828 CG6742-PA 396..497 49..161 163 36.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 09:40:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20174-PA 700 GI20174-PA 1..700 37..731 3167 86.6 Plus
Dmoj\GI12625-PA 949 GI12625-PA 670..861 49..259 219 31.5 Plus
Dmoj\GI20274-PA 1170 GI20274-PA 444..684 49..267 177 25.4 Plus
Dmoj\GI23022-PA 832 GI23022-PA 395..496 49..161 175 36.3 Plus
Dmoj\GI18933-PA 517 GI18933-PA 35..127 47..155 171 35.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 09:40:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17188-PA 697 GL17188-PA 1..697 37..731 3316 91.5 Plus
Dper\GL21243-PA 903 GL21243-PA 625..817 49..259 228 30.7 Plus
Dper\GL13665-PA 830 GL13665-PA 395..496 49..161 177 36.3 Plus
Dper\GL11678-PA 523 GL11678-PA 31..154 47..186 171 31.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 09:40:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14111-PB 732 GA14111-PB 1..732 1..731 3405 89.6 Plus
Dpse\GA16495-PA 960 GA16495-PA 682..874 49..259 229 30.7 Plus
Dpse\GA19825-PA 830 GA19825-PA 395..496 49..161 177 36.3 Plus
Dpse\GA20924-PA 523 GA20924-PA 31..154 47..186 171 31.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 09:40:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20501-PA 695 GM20501-PA 1..695 37..731 3674 98.4 Plus
Dsec\GM26489-PA 828 GM26489-PA 396..497 49..161 179 36.3 Plus
Dsec\GM21077-PA 432 GM21077-PA 31..121 47..153 163 35.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 09:40:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25964-PA 695 GD25964-PA 1..695 37..731 3690 98.8 Plus
Dsim\GD23935-PA 927 GD23935-PA 649..841 49..259 224 31.9 Plus
Dsim\GD21002-PA 828 GD21002-PA 396..497 49..161 173 36.3 Plus
Dsim\GD10613-PA 542 GD10613-PA 31..131 47..163 171 33.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 09:40:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20131-PA 695 GJ20131-PA 1..695 37..731 3267 88.6 Plus
Dvir\GJ18155-PA 948 GJ18155-PA 671..862 49..259 214 31.5 Plus
Dvir\GJ24615-PA 833 GJ24615-PA 395..496 49..161 177 36.3 Plus
Dvir\GJ21305-PA 520 GJ21305-PA 35..158 47..186 173 31.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 09:40:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10671-PA 697 GK10671-PA 5..697 39..731 3126 84.4 Plus
Dwil\GK15018-PA 959 GK15018-PA 676..865 49..259 215 30.7 Plus
Dwil\GK14415-PA 823 GK14415-PA 396..497 49..161 176 36.3 Plus
Dwil\GK22097-PA 533 GK22097-PA 33..156 47..186 170 32.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 09:40:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13085-PA 695 GE13085-PA 1..695 37..731 3666 97.8 Plus
Dyak\GE18693-PA 927 GE18693-PA 649..841 49..259 222 31.9 Plus
Dyak\GE10356-PA 828 GE10356-PA 396..497 49..161 175 36.3 Plus
Dyak\GE19238-PA 509 GE19238-PA 31..131 47..163 171 33.3 Plus

LD30319.hyp Sequence

Translation from 103 to 2298

> LD30319.hyp
MCFASSIIEAHRKLFIAPPDLDHSDPATPTISTRSKMPRGKSRLQTEVCG
DCGAGDPSWASINRGILLCADCCSVHRSLGRHISIVKSLRQGNWEPSVLN
FVNSLNAHGANSVWEHHLLDGSTNSTGGKHVPRWRKPTPKDALHPTKSDF
IKAKHVNLTFVLKPSLQDDDDGNGSAGCLEQELSRQLHASVRTSNLETSL
RFLVQGADPNYYHEDKLSTPLHMAAKFGQASQIEMLLIYGADVNALDGNG
MTPLELARANNHNTIAERLLDAMYDVTDRIITFLGGKKPDHASGRHMIIP
DANGADISEQLKIARGKLQLVPNKMFEELVMDLYDEVDRRECEAIWSTST
LNADHATVPFLPANPFLSATRNQGRQKLARFNRAEFTGLLTDVLVDAMRR
QNMANLRPMDAPVAGHQSLQSLPYANNSMLLGSFEQGGHDPNLSDDEPIY
DPVASDDDYAPVPPMAQQAIVHTPPRSANSHNEMETLRKQLNDYKSEINQ
LKNVVQMLSSENTQLKSKFSSASNNSVYDEPLRIDLSLSSPDTEHEPLSL
PEGGTANGESGSSNDSSNQSTIKRPASMYERRLVPNVAKGNTDIRNTTSM
YQMAGDGKPFGEEVKVRSDLVTRRLKELIRAMQPVPEDQKQSIAPHGELI
RSAVTDLIALYANLPPNASDPSRETLKLLTRQNILIQHECENLQKAIEAD
DKQAIQKNTLEVRDCAFHIASAIKTLVLQFY*

LD30319.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:08:34
Subject Length Description Subject Range Query Range Score Percent Strand
Git-PA 731 CG16728-PA 1..731 1..731 3801 100 Plus
CenG1A-PC 763 CG31811-PC 485..677 49..259 223 30.7 Plus
CenG1A-PA 927 CG31811-PA 649..841 49..259 223 30.7 Plus
CenG1A-PB 995 CG31811-PB 717..909 49..259 223 30.7 Plus
CG8243-PA 517 CG8243-PA 33..154 49..186 170 31.9 Plus