BDGP Sequence Production Resources |
Search the DGRC for LD30408
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 304 |
Well: | 8 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8617-RA |
Protein status: | LD30408.pep: gold |
Preliminary Size: | 1623 |
Sequenced Size: | 1334 |
Gene | Date | Evidence |
---|---|---|
CG8617 | 2001-01-01 | Release 2 assignment |
CG8617 | 2001-07-04 | Blastp of sequenced clone |
CG8617 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8617 | 2008-04-29 | Release 5.5 accounting |
CG8617 | 2008-08-15 | Release 5.9 accounting |
CG8617 | 2008-12-18 | 5.12 accounting |
1334 bp (1334 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051779
> LD30408.complete TGGAAGCAAATATCGATGACAGTCTTTATTTATATATTTCCTAATCAATA TACCTGATATCAACAACTGATGCACAAAACACACCGTCTCACCACCGACA GCCAGTACATGGAGGTCGAAGGCTTGCTGCAGGCCATGGACATGCCCACC AGCCACGACCCGGAGGCGGAACTGGAACCGGAGTCCACGTCGCTGTGCCG CCTGAGCCGCTACAACGTGACCAACCTGTACGACGGGCCGGCGGGCGGGG GTTCCTCATTGAGCTCGGGCCGCCAGCGTTGCTACACAATGCCGCATGTG CCACCGCCAGCGCCGCCCTCCACGCCCACTCTGCTGACCAGCGGGTGCGG CGGCAGCAGCAACTCCGTATCCGTCTCCATCTCGCCCACCTGCTCCGCTG GAAGCCATCCCTTGGATAGCCAAAGTTTGAGCCAGAGCCCCTTGAACCAC TTCATCTACGTAAAGAATGGCAAGAACCTGCGTCGCGAATCGCGCTGCGT CGACTCGGAGCTGTCAAAGTTATTCAACGTGGTGTCCATCACAAACCGGC TGACGGCTATTAAGAACCGCAGCAATTCCATTTCGAATTCCAGTGGAATA CTCAATGCCTCGCGCACCATATCGAAGTTAAACGGGGCGACGGCCACCAA GATCTTTAAGATTCATCGGGATCCGAAGGAATTTCTGCGCGAAACGGACG AGGATTCCGTGTCTGCGCCGGAGTACGACGAGGAGGAGGAGGACACGCGC TTCCGTTTCTTTCGGCGTGCGCGCTTCTCGAGGAGGTACAGTACCGCACG ATCCGGCCGGAAATTTGCGCGAAAGTTCGCCCGATTTGAGCATCATGAGC GCATGGAAACCATCGTGGATAGTTTCGATGCAGCAATGAGCTTCAATGAT GCAGACACCTGAGAGGCGGAGGCCACGACGAGGACGACGACGACAGCAAC AGTTGAGAATGAGGCATGGCAGATGGTCGGCCAACCAATGTGATGAATGT GAATTTCAACTAAATTATTTTAATTACTACAAACTACTATTATTACGATT ATTATTACCGATTACCGAACTGTTCTCTCCATACGTTTAGTTTCCTTCTA CGCCGATTGCCGTGGCCTTCGAGATCCCAGCACCACTCCTGCATTTGATC GGGTTTGGTGGCGGATCGCGGACGCAGCGCATGGCACGCATTTAGTTTAA AGCCTAGTTTTACGCCTACGCCTCTGGGGCGGAGCAGGTTCAGCCGACCA CCGAATGGTTGATAGCTCCACGAACAGAACGATTCCAATAAATGCACAAA ACGTGTTGTATTCGAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8617-RA | 1483 | CG8617-RA | 111..1425 | 1..1315 | 6560 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmir\TRIM | 3111 | Dmir\TRIM DMTRIM 3126bp Derived from X59239 (Rel. 35, Last updated, Version 3). | 2781..2816 | 726..761 | 117 | 80.6 | Plus |
transib1 | 2167 | transib1 TRANSIB1 2167bp | 1725..1843 | 980..1093 | 114 | 60 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 10243093..10244274 | 133..1314 | 99 | <- | Minus |
chr2R | 10244460..10244591 | 1..132 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8617-RA | 1..843 | 70..912 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8617-RA | 1..843 | 70..912 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8617-RA | 1..843 | 70..912 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8617-RA | 1..843 | 70..912 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8617-RA | 1..843 | 70..912 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8617-RA | 18..1331 | 1..1314 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8617-RA | 18..1331 | 1..1314 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8617-RA | 15..1328 | 1..1314 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8617-RA | 18..1331 | 1..1314 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8617-RA | 15..1328 | 1..1314 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14355769..14356950 | 133..1314 | 99 | <- | Minus |
2R | 14357136..14357267 | 1..132 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14355769..14356950 | 133..1314 | 99 | <- | Minus |
2R | 14357136..14357267 | 1..132 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14355769..14356950 | 133..1314 | 99 | <- | Minus |
2R | 14357136..14357267 | 1..132 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 10243274..10244455 | 133..1314 | 99 | <- | Minus |
arm_2R | 10244641..10244772 | 1..132 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14356968..14358149 | 133..1314 | 99 | <- | Minus |
2R | 14358335..14358466 | 1..132 | 100 | Minus |
Translation from 69 to 911
> LD30408.hyp MHKTHRLTTDSQYMEVEGLLQAMDMPTSHDPEAELEPESTSLCRLSRYNV TNLYDGPAGGGSSLSSGRQRCYTMPHVPPPAPPSTPTLLTSGCGGSSNSV SVSISPTCSAGSHPLDSQSLSQSPLNHFIYVKNGKNLRRESRCVDSELSK LFNVVSITNRLTAIKNRSNSISNSSGILNASRTISKLNGATATKIFKIHR DPKEFLRETDEDSVSAPEYDEEEEDTRFRFFRRARFSRRYSTARSGRKFA RKFARFEHHERMETIVDSFDAAMSFNDADT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8617-PA | 280 | CG8617-PA | 1..280 | 1..280 | 1450 | 100 | Plus |
Translation from 69 to 911
> LD30408.pep MHKTHRLTTDSQYMEVEGLLQAMDMPTSHDPEAELEPESTSLCRLSRYNV TNLYDGPAGGGSSLSSGRQRCYTMPHVPPPAPPSTPTLLTSGCGGSSNSV SVSISPTCSAGSHPLDSQSLSQSPLNHFIYVKNGKNLRRESRCVDSELSK LFNVVSITNRLTAIKNRSNSISNSSGILNASRTISKLNGATATKIFKIHR DPKEFLRETDEDSVSAPEYDEEEEDTRFRFFRRARFSRRYSTARSGRKFA RKFARFEHHERMETIVDSFDAAMSFNDADT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11356-PA | 292 | GF11356-PA | 1..292 | 1..280 | 803 | 71.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22429-PA | 280 | GG22429-PA | 1..280 | 1..280 | 1468 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22124-PA | 268 | GH22124-PA | 3..268 | 2..280 | 799 | 67.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8617-PA | 280 | CG8617-PA | 1..280 | 1..280 | 1450 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19353-PA | 270 | GI19353-PA | 3..270 | 2..280 | 770 | 66.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11404-PA | 279 | GL11404-PA | 1..279 | 1..280 | 833 | 74.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21212-PA | 279 | GA21212-PA | 1..279 | 1..280 | 833 | 74.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20216-PA | 274 | GM20216-PA | 1..274 | 1..280 | 1413 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25687-PA | 274 | GD25687-PA | 1..274 | 1..280 | 1413 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20336-PA | 259 | GJ20336-PA | 4..259 | 3..280 | 794 | 67.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21838-PA | 269 | GK21838-PA | 12..269 | 10..280 | 644 | 53.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12318-PA | 280 | GE12318-PA | 1..280 | 1..280 | 1467 | 98.6 | Plus |