BDGP Sequence Production Resources |
Search the DGRC for LD30439
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 304 |
Well: | 39 |
Vector: | pOT2 |
Associated Gene/Transcript | CG12608-RA |
Protein status: | LD30439.pep: gold |
Preliminary Size: | 1738 |
Sequenced Size: | 1623 |
Gene | Date | Evidence |
---|---|---|
CG12608 | 2001-01-01 | Release 2 assignment |
CG12608 | 2001-07-04 | Blastp of sequenced clone |
CG12608 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12608 | 2008-04-29 | Release 5.5 accounting |
CG12608 | 2008-08-15 | Release 5.9 accounting |
CG12608 | 2008-12-18 | 5.12 accounting |
1623 bp (1623 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051782
> LD30439.complete TTGAATAGTCGTTGTCGTTGGAACACGTTTTGCCAGCAGAAACAAATTCT TGAATAGAATTTAGTGACTTATTCGACAAATCCATTTAATTTTCCATTTC CATTTTCATTTCAAACCGCTGCCATGCCGCCGGAAATGGAGATCATAGTG GGCACCTACGAGGAGGTCCTGCTGGGCTTCAAGCTCATCAAATCGCCGAC TGACGGCTTGACCGATTCCGTCAAATTTGAGCTGAAACAGACTTTTGCAG ACAGCTCCCATGCAGGATCCATTACATCGGTGGCCGTGCAGTGGCCTTGG GTGGCCAGTGGCGGTACCGACGACAGGATCTTCGTCTACGACATGCGCAC GCGGAAACAGTCGCAGATCATACTCTCGCACGCCGGAAGAGTGAACACAC TGAAATTCACACCTGACCTGTCGCACTTGCTCTCCGGGAGCGACGATGGC CATATGATCGCCACACGCGTGGGCAGCTGGACCAAAGAGGGTGATTGGCA GAAGGCCCATGCCGGACAGGCCGTCACCCACATCAGTTGCCATCCCAGCA GCAAGTTGGCCTTATCTTTGGGCGGCGACCAGGTGCTGAACACCTGGAAT CTGGTCAATGGCCGCGTCGCCTACAAGACCAATTTAAAGAACAAGGCTAC GCTGGGTCTCCAACCGGGCTGCTTGTCGTGGTCCAAGCAGGGCGATCACT TCACACTTAGCGGTCCATTGGTTCTGGAGATCTGGGGCATCGAGAACGCT CATGTTATGCGTCGCATTGAGATGCCGGCGAAACCCATTTGCATCACCTG GCTGGATGGGAACGAGTGTTTAACTGGCCTGGACAACGGCAACATTGCCT GGATTTCCCTCAAGGACGAGGATGATACACCACCCACCTTCATTCTTGCA CACGAGGCAAGGGTCAAGGCCATCGCCTATCTGAACGAATTACTGGCCAC CGTCTCCAGCGCTGGTGAAATCAAAGTCTGGAAGATCGACATGGAAACGC GCAAGCTGGAGGAGATTGCCAGCAGCTTCATGGACTGCCGACCCACCGAC TTGGGCCTGCTGGATCTCCGCCAGTTCGGCAATGTCCAACCGGTGGAACA ACGCATTAAAGTGGAGGAGAAACCAAAGGCGAAAGTGGAGTCTGACCAAA GTGCCAAGCCTGCAGCACCTCGGGGATTCGTGACCATCGAGTACGAGCAG GATAAGAATCTGGATGCCGAGAAGAAGAAGGGAAAGGGGAAGAAGAACAA GATACAGGCAAAGAAGGCGCAACAGAAAGCCGAGGAATCCTCAGAAGAAA GCAACTCATCGGAAGAAAAGGAGAGCGACGACTTCTCCGACAGCGACAGC GATGTCTCCAGTGATCACGGCCACCGGAAGAGGAAGCCAATGAAGCGCAA GCAGCAACCCACTCCAGCCTCCAAGGGGAAGGCAAAGCAGCAGAAAAAGA AGTAGTTTTTAGTAGCTAACGTTATGACTATCAATAAATATTGAGTTAAT CTAGAGATATAGATAAAAAAACCATAGATGAACTGTCGATTTGGCTGGGA TGAACAGAATTATGAATAAATACCTCTGAACTTAAGAAGTTCGATCTCAT TAACGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12608.a | 1949 | CG12608.a | 345..1949 | 1..1605 | 8025 | 100 | Plus |
CG12608-RA | 1724 | CG12608-RA | 120..1724 | 1..1605 | 8025 | 100 | Plus |
CG9123-RA | 1628 | CG9123-RA | 11..1252 | 3..1244 | 5520 | 96.2 | Plus |
CG9123-RA | 1628 | CG9123-RA | 1255..1589 | 1274..1608 | 1380 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 15233670..15234551 | 882..1 | 4395 | 99.9 | Minus |
chrX | 22417052 | chrX | 15231159..15232038 | 882..3 | 3935 | 96.5 | Minus |
chrX | 22417052 | chrX | 15232794..15233444 | 1605..955 | 3255 | 100 | Minus |
chrX | 22417052 | chrX | 15230310..15230641 | 1605..1274 | 1345 | 94.9 | Minus |
chrX | 22417052 | chrX | 15230644..15230933 | 1244..955 | 1270 | 95.9 | Minus |
chrX | 22417052 | chrX | 15233534..15233610 | 959..883 | 370 | 98.7 | Minus |
chrX | 22417052 | chrX | 15231024..15231099 | 958..883 | 350 | 97.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 15343733..15344614 | 882..1 | 4410 | 100 | Minus |
X | 23542271 | X | 15341222..15342101 | 882..3 | 3920 | 96.4 | Minus |
X | 23542271 | X | 15342854..15343507 | 1608..955 | 3270 | 100 | Minus |
X | 23542271 | X | 15340370..15340704 | 1608..1274 | 1360 | 95 | Minus |
X | 23542271 | X | 15340707..15340996 | 1244..955 | 1285 | 96.2 | Minus |
X | 23542271 | X | 15343597..15343673 | 959..883 | 385 | 100 | Minus |
X | 23542271 | X | 15341087..15341162 | 958..883 | 350 | 97.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 15351831..15352712 | 882..1 | 4410 | 100 | Minus |
X | 23527363 | X | 15349320..15350199 | 882..3 | 3920 | 96.3 | Minus |
X | 23527363 | X | 15350952..15351605 | 1608..955 | 3270 | 100 | Minus |
X | 23527363 | X | 15348468..15348802 | 1608..1274 | 1380 | 94.9 | Minus |
X | 23527363 | X | 15348805..15349094 | 1244..955 | 1285 | 96.2 | Minus |
X | 23527363 | X | 15351695..15351771 | 959..883 | 385 | 100 | Minus |
X | 23527363 | X | 15349185..15349260 | 958..883 | 350 | 97.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fw2 | 3961 | Fw2 FW2 3961bp | 3656..3701 | 1596..1551 | 113 | 71.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 15232794..15233439 | 960..1605 | 100 | <- | Minus |
chrX | 15233534..15233610 | 883..959 | 98 | <- | Minus |
chrX | 15233670..15234551 | 1..882 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12608-RA | 1..1332 | 124..1455 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12608-RA | 1..1332 | 124..1455 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12608-RA | 1..1332 | 124..1455 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12608-RA | 1..1332 | 124..1455 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12608-RA | 1..1332 | 124..1455 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12608-RA | 1..1605 | 1..1605 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12608-RA | 8..1612 | 1..1605 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12608-RA | 12..1616 | 1..1605 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12608-RA | 1..1605 | 1..1605 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12608-RA | 12..1616 | 1..1605 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15343733..15344614 | 1..882 | 100 | Minus | |
X | 15342857..15343502 | 960..1605 | 100 | <- | Minus |
X | 15343597..15343673 | 883..959 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15343733..15344614 | 1..882 | 100 | Minus | |
X | 15342857..15343502 | 960..1605 | 100 | <- | Minus |
X | 15343597..15343673 | 883..959 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15343733..15344614 | 1..882 | 100 | Minus | |
X | 15342857..15343502 | 960..1605 | 100 | <- | Minus |
X | 15343597..15343673 | 883..959 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 15236890..15237535 | 960..1605 | 100 | <- | Minus |
arm_X | 15237630..15237706 | 883..959 | 100 | <- | Minus |
arm_X | 15237766..15238647 | 1..882 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15350955..15351600 | 960..1605 | 100 | <- | Minus |
X | 15351695..15351771 | 883..959 | 100 | <- | Minus |
X | 15351831..15352712 | 1..882 | 100 | Minus |
Translation from 123 to 1454
> LD30439.hyp MPPEMEIIVGTYEEVLLGFKLIKSPTDGLTDSVKFELKQTFADSSHAGSI TSVAVQWPWVASGGTDDRIFVYDMRTRKQSQIILSHAGRVNTLKFTPDLS HLLSGSDDGHMIATRVGSWTKEGDWQKAHAGQAVTHISCHPSSKLALSLG GDQVLNTWNLVNGRVAYKTNLKNKATLGLQPGCLSWSKQGDHFTLSGPLV LEIWGIENAHVMRRIEMPAKPICITWLDGNECLTGLDNGNIAWISLKDED DTPPTFILAHEARVKAIAYLNELLATVSSAGEIKVWKIDMETRKLEEIAS SFMDCRPTDLGLLDLRQFGNVQPVEQRIKVEEKPKAKVESDQSAKPAAPR GFVTIEYEQDKNLDAEKKKGKGKKNKIQAKKAQQKAEESSEESNSSEEKE SDDFSDSDSDVSSDHGHRKRKPMKRKQQPTPASKGKAKQQKKK*
Translation from 123 to 1454
> LD30439.pep MPPEMEIIVGTYEEVLLGFKLIKSPTDGLTDSVKFELKQTFADSSHAGSI TSVAVQWPWVASGGTDDRIFVYDMRTRKQSQIILSHAGRVNTLKFTPDLS HLLSGSDDGHMIATRVGSWTKEGDWQKAHAGQAVTHISCHPSSKLALSLG GDQVLNTWNLVNGRVAYKTNLKNKATLGLQPGCLSWSKQGDHFTLSGPLV LEIWGIENAHVMRRIEMPAKPICITWLDGNECLTGLDNGNIAWISLKDED DTPPTFILAHEARVKAIAYLNELLATVSSAGEIKVWKIDMETRKLEEIAS SFMDCRPTDLGLLDLRQFGNVQPVEQRIKVEEKPKAKVESDQSAKPAAPR GFVTIEYEQDKNLDAEKKKGKGKKNKIQAKKAQQKAEESSEESNSSEEKE SDDFSDSDSDVSSDHGHRKRKPMKRKQQPTPASKGKAKQQKKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21235-PA | 442 | GF21235-PA | 1..442 | 1..443 | 1438 | 66.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19407-PA | 449 | GG19407-PA | 1..439 | 1..433 | 1630 | 75.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17949-PA | 444 | GH17949-PA | 4..369 | 3..366 | 1027 | 53.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12608-PA | 443 | CG12608-PA | 1..443 | 1..443 | 2313 | 100 | Plus |
CG9123-PA | 434 | CG9123-PA | 1..434 | 1..443 | 2070 | 91 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15418-PA | 707 | GI15418-PA | 1..362 | 1..362 | 989 | 49.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14746-PA | 310 | GL14746-PA | 1..56 | 1..59 | 167 | 52.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11717-PA | 513 | GA11717-PA | 12..415 | 1..410 | 1149 | 54.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10041-PA | 442 | GM10041-PA | 1..432 | 1..433 | 1831 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15809-PA | 475 | GD15809-PA | 1..463 | 1..431 | 1762 | 76.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16376-PA | 482 | GJ16376-PA | 1..416 | 1..432 | 1025 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19853-PA | 438 | GK19853-PA | 1..361 | 1..360 | 1200 | 61.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16055-PA | 453 | GE16055-PA | 1..357 | 1..359 | 1584 | 81.6 | Plus |