BDGP Sequence Production Resources |
Search the DGRC for LD30472
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 304 |
Well: | 72 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5276-RA |
Protein status: | LD30472.pep: gold |
Preliminary Size: | 1755 |
Sequenced Size: | 1623 |
Gene | Date | Evidence |
---|---|---|
CG5276 | 2001-01-01 | Release 2 assignment |
CG5276 | 2001-09-19 | Blastp of sequenced clone |
CG5276 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5276 | 2008-04-29 | Release 5.5 accounting |
CG5276 | 2008-08-15 | Release 5.9 accounting |
CG5276 | 2008-12-18 | 5.12 accounting |
1623 bp (1623 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058610
> LD30472.complete AAACAGAGCAGCAGACCAAGAAAATCGGACACATCACCGCGAACGAGATC TTGCTGACGTGCGACCAGATGCAGAGCCCTGCCTTCGCGTACCGGGAACA CGCAGAACACTCGCCGCGCGCCATGTACATGCGCGACTGGCGATCGGCCC TGCGGACGCCCACGTACCGGATTGGGAATCGGACGGTGCGCTTTAACTAT CACTTCGCCCTTCTGATTGTTTGCGCCTTCGTACTCGTCCTACTCTTCTA CTTTGCGCGCCAGGGATCGCACTCCTCCTCCGACGGCTACTGGCTGCGCC GCAGTTACACGGATGCCCGGAGTCTGGACAATGGTGGTCCAGTGGTCCAG GCCTACAATGCCACATATCCGCTCACGTCACCCATGGTGCTGCGTGGCGG TGTGATAAACTACCGGATAGCCATGATTGCCGATCTGGACACCAGTTCCA AGGTGAGCAAGGGCGATGGGAGCAGCACGTGGCGTAGCTACCTGAAGAAG GGCTACCTTACCTACACGGTGGCCAGGTCAGAGATCCAGATTAGCTGGGA TGACGGGGCGCCGATAGTCCTGGAATCAGCATTTGCCCTTAAGGGCCGCG GAATGGAGCTATCTGAGCTAGTCACCTTCAACGGGCGCCTGCTCACCTTC GACGACCGAACGGGTTTGATATACGAGATTGTGAATGACAAGCCCATTCC CTGGGTGATCCTGCTCGATGGAGACGGACACAGTGCCAAGGGCTTCAAGG CCGAATGGGCCACAGTGAAAGAGCAAACGCTGTATGTGGGCTCCATGGGC AAGGAGTGGACGACAAGTGCGGGTGATTTCGAGAACAATAACCCCATGTA CGTAAAGGCCATCACTCCGTCCGGCGAGGTGAGGTCGCTCAACTGGGTGG ACAATTTCAAGCAGTTGCGCCTGCAGTCGATGCAAATAACCTGGCCGGGC TACATGATCCACGAGAGTGGAACCTGGTCAGAGGAAAGGAATCGCTGGTT TTTCCTGCCTAGGCGGTGTTCGAAAGAGAAATACAACGAAACCAAGGACG AGCACATGGGCTGCAATGTCCTGGTCTCCGCCGACGAAAGCTTCACCAAC GTTGAGACTGTACGGCTCGATCCTGAAAATACAACGCCCACGCATGGTTT CTCTAGCTTTAAGTTCTTGCCCGGCACCGATGACTCAATAATCGTGGCTC TTAAGTCGGAGGAGTTGAATGGCAAGACGGCCACCTTCATCACAGCCTTC GATATTGCGGGCAAGACACTGCTGCCCGAAACGAGGATCGAGACGGACTA CAAGTATGAGGGATTCGAGTTCATTTAGCTCGCCATTCCAAGCTACCGCA CTCCACTCTACTTCGATCCAGGTGCTTCAGTTTTAAACGTGTACATATTG TATTATTGTCCCATACGGTAAGCTTTATATTTATAGTCACCTAGATTAGT CCAGAGATGCTCATCTGCCTCATGAACCGTGACTCCTTGTCCCGTCTTGT ACCATAGCACAAAAAAAAATTTTAGTTTATTTTTATTAAAATTGAAATAT AAAACGTACAAAGCCGGTGGCAAACTCAGAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 7257381..7258410 | 1..1030 | 100 | -> | Plus |
chr3R | 7258465..7259013 | 1031..1579 | 91 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5276-RA | 1..1260 | 69..1328 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5276-RA | 1..1260 | 69..1328 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5276-RA | 1..1260 | 69..1328 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5276-RA | 1..1260 | 69..1328 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5276-RA | 1..1260 | 69..1328 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5276-RA | 174..1752 | 1..1579 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5276-RA | 174..1752 | 1..1579 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5276-RA | 174..1752 | 1..1579 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5276-RA | 174..1752 | 1..1579 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5276-RA | 174..1752 | 1..1579 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11431911..11432940 | 1..1030 | 100 | -> | Plus |
3R | 11432995..11433543 | 1031..1579 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11431911..11432940 | 1..1030 | 100 | -> | Plus |
3R | 11432995..11433543 | 1031..1579 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11431911..11432940 | 1..1030 | 100 | -> | Plus |
3R | 11432995..11433543 | 1031..1579 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 7257633..7258662 | 1..1030 | 100 | -> | Plus |
arm_3R | 7258717..7259265 | 1031..1579 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11172742..11173771 | 1..1030 | 100 | -> | Plus |
3R | 11173826..11174374 | 1031..1579 | 100 | Plus |
Translation from 2 to 1327
> LD30472.hyp TEQQTKKIGHITANEILLTCDQMQSPAFAYREHAEHSPRAMYMRDWRSAL RTPTYRIGNRTVRFNYHFALLIVCAFVLVLLFYFARQGSHSSSDGYWLRR SYTDARSLDNGGPVVQAYNATYPLTSPMVLRGGVINYRIAMIADLDTSSK VSKGDGSSTWRSYLKKGYLTYTVARSEIQISWDDGAPIVLESAFALKGRG MELSELVTFNGRLLTFDDRTGLIYEIVNDKPIPWVILLDGDGHSAKGFKA EWATVKEQTLYVGSMGKEWTTSAGDFENNNPMYVKAITPSGEVRSLNWVD NFKQLRLQSMQITWPGYMIHESGTWSEERNRWFFLPRRCSKEKYNETKDE HMGCNVLVSADESFTNVETVRLDPENTTPTHGFSSFKFLPGTDDSIIVAL KSEELNGKTATFITAFDIAGKTLLPETRIETDYKYEGFEFI*
Translation from 68 to 1327
> LD30472.pep MQSPAFAYREHAEHSPRAMYMRDWRSALRTPTYRIGNRTVRFNYHFALLI VCAFVLVLLFYFARQGSHSSSDGYWLRRSYTDARSLDNGGPVVQAYNATY PLTSPMVLRGGVINYRIAMIADLDTSSKVSKGDGSSTWRSYLKKGYLTYT VARSEIQISWDDGAPIVLESAFALKGRGMELSELVTFNGRLLTFDDRTGL IYEIVNDKPIPWVILLDGDGHSAKGFKAEWATVKEQTLYVGSMGKEWTTS AGDFENNNPMYVKAITPSGEVRSLNWVDNFKQLRLQSMQITWPGYMIHES GTWSEERNRWFFLPRRCSKEKYNETKDEHMGCNVLVSADESFTNVETVRL DPENTTPTHGFSSFKFLPGTDDSIIVALKSEELNGKTATFITAFDIAGKT LLPETRIETDYKYEGFEFI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16866-PA | 422 | GF16866-PA | 1..422 | 1..419 | 1958 | 85.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18156-PA | 418 | GG18156-PA | 1..418 | 1..419 | 2124 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17322-PA | 417 | GH17322-PA | 1..417 | 1..419 | 1708 | 75.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5276-PB | 419 | CG5276-PB | 1..419 | 1..419 | 2223 | 100 | Plus |
CG5276-PA | 419 | CG5276-PA | 1..419 | 1..419 | 2223 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10286-PA | 414 | GI10286-PA | 1..414 | 1..419 | 1748 | 75.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12374-PA | 419 | GL12374-PA | 3..419 | 2..419 | 1893 | 85.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18779-PA | 419 | GA18779-PA | 3..419 | 2..419 | 1902 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23945-PA | 419 | GM23945-PA | 1..419 | 1..419 | 2198 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18755-PA | 420 | GD18755-PA | 1..420 | 1..419 | 2175 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11094-PA | 415 | GJ11094-PA | 1..415 | 1..419 | 1769 | 75.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11295-PA | 417 | GK11295-PA | 1..417 | 1..419 | 1828 | 81.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26097-PA | 418 | GE26097-PA | 1..418 | 1..419 | 2122 | 94 | Plus |