BDGP Sequence Production Resources |
Search the DGRC for LD30509
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 305 |
Well: | 9 |
Vector: | pOT2 |
Associated Gene/Transcript | CG11802-RA |
Protein status: | LD30509.pep: gold |
Preliminary Size: | 1541 |
Sequenced Size: | 1475 |
Gene | Date | Evidence |
---|---|---|
CG11802 | 2001-01-01 | Release 2 assignment |
CG11802 | 2002-04-04 | Blastp of sequenced clone |
CG11802 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11802 | 2008-04-29 | Release 5.5 accounting |
CG11802 | 2008-08-15 | Release 5.9 accounting |
CG11802 | 2008-12-18 | 5.12 accounting |
1475 bp (1475 high quality bases) assembled on 2002-04-04
GenBank Submission: AY095044
> LD30509.complete TGCGATTCGATTTGAGGCTTTGGCATCGATTTGTTTTGAGGTGTAAATCG ACTGGCTTGGGCCACTGGAAATGAAGCAGCAGGTGGGCCCAGGACAGCAA CAGTGACAGCGCCAGCTAACCACAAAATTCGGGCCAGGAGTACGCGGAAC TTGGAGTCGGAATCGACAGGAATCGGATCGATAAATGGGCGCCGAGCATT CGCAGCAGCGGGCTGAGGCCGATGGCCACGAGATCTTCGACGGACGCCAG CCACCAGGAGCGGGCACTGGATCCCTCGGCGATGGCAGCTCCATGATGCT GGCGGCCACGGCGGCGGCCAACAAACGACGCGGAGTTGGTCATCGCCAGC AGACGACAGGAGGAGCAGGCGGAACAGTGGTGGGCCCGGGAGCTGGAGTG GGCCCAGCTAGCATTGTGATAGCTAGCAAGCAGATCATCGCCGAGGCCGC TTCGCCCGGCGGCTCCGAACTGAGCAGACCGCCTTCGCCGCCGCTTAGCG TCTGCTCCGACCTGCCATATGTGTCCTATACAGATCGGCCAATCGGTGAT TCGCCCAAGATACGCAGCAAGCCGGCGCATATGCTCCAGCAGAGCAGCGC CAGCCGTGCGGCGGCCAGGAAGTCACATCCGAGTGGACTCACCAGCGCCG TGAAACCGAAGCGACCACAGTCCACGGCCTCTAGTCATAATATAGTGATT GTGCGTCCCGGTGCCATCGATGCTGGCGAGGATGTGGACATGGACTTGGC ACGATTGCGCAATATACCGCAGTTTCTGCCCGTGCTCCGTGAATCCATCA CGTCGGCGACCAATACACGAGATGCAGAGATTCTGGAGCGACTAAACTCG CAGCATTTGATCAACATATGTACCCGCATGCAAACACATCTTAATCTGTG CGCCAGCTATGTGGCCAGCGAACAGAATCACCTCGTGGAACGTACCAAGG TGGTGAGCAACTCGATCACCACCCTCTTTGCCGGATTCGTGGACATGCAG AAGACGTACGCCTCGTACGCCGAGCAATTCGCCAAGATTCGGAGCATATC GCATCAGCTGAGCAGATGCAACTCGCTGCTGCACGAGAACATAGCCAGTC TGGAGGCGATCAATAACTTCCTGGACGACGAGGACCGCCTGGAGCCCTTC GTCTGGCGCACCGACGACAACAAGCTGCGCGGCGAGGCTGAGGGCGCCAT CGGAGGCAACAGCAGTCGCCTGTGGCGGCTGTAGGATCCCCACACACTTA TTGGTCTCCAAAGATTTTCCTAGCTCATAATAATCGTGTATTTATTGTGT ATATTACTCGTTAACGATGCCGCTTAATCGTGATTTTTAATTAGTAAATC AAACCTAATATTAAACTCAATTTGATATTTTATTTCTCGAAATGCAAATA GTATTTTTCTATATTATCACGAAAAAAAAAAAAAAAATTAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11802-RA | 1480 | CG11802-RA | 49..1475 | 1..1427 | 7135 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 11762433..11763859 | 1427..1 | 7090 | 99.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 11871304..11872730 | 1427..1 | 7135 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 11879402..11880828 | 1427..1 | 7135 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 11762439..11763859 | 1..1421 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11802-RA | 1..1050 | 185..1234 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11802-RA | 1..1050 | 185..1234 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11802-RA | 1..1050 | 185..1234 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11802-RA | 1..1050 | 185..1234 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11802-RA | 1..1050 | 185..1234 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11802-RA | 49..1469 | 1..1421 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11802-RA | 49..1469 | 1..1421 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11802-RA | 50..1470 | 1..1421 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11802-RA | 49..1469 | 1..1421 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11802-RA | 50..1470 | 1..1421 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11871310..11872730 | 1..1421 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11871310..11872730 | 1..1421 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11871310..11872730 | 1..1421 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 11765343..11766763 | 1..1421 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11879408..11880828 | 1..1421 | 100 | Minus |
Translation from 184 to 1233
> LD30509.pep MGAEHSQQRAEADGHEIFDGRQPPGAGTGSLGDGSSMMLAATAAANKRRG VGHRQQTTGGAGGTVVGPGAGVGPASIVIASKQIIAEAASPGGSELSRPP SPPLSVCSDLPYVSYTDRPIGDSPKIRSKPAHMLQQSSASRAAARKSHPS GLTSAVKPKRPQSTASSHNIVIVRPGAIDAGEDVDMDLARLRNIPQFLPV LRESITSATNTRDAEILERLNSQHLINICTRMQTHLNLCASYVASEQNHL VERTKVVSNSITTLFAGFVDMQKTYASYAEQFAKIRSISHQLSRCNSLLH ENIASLEAINNFLDDEDRLEPFVWRTDDNKLRGEAEGAIGGNSSRLWRL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21592-PA | 352 | GF21592-PA | 1..352 | 1..349 | 1530 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18825-PA | 349 | GG18825-PA | 1..349 | 1..349 | 1808 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12800-PA | 352 | GH12800-PA | 1..352 | 1..349 | 1404 | 79 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11802-PA | 349 | CG11802-PA | 1..349 | 1..349 | 1781 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15955-PA | 366 | GI15955-PA | 1..366 | 1..349 | 1408 | 76.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20405-PA | 340 | GL20405-PA | 1..340 | 1..349 | 1478 | 82.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11209-PA | 340 | GA11209-PA | 1..340 | 1..349 | 1475 | 82.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13037-PA | 349 | GM13037-PA | 1..349 | 1..349 | 1814 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15961-PA | 154 | GD15961-PA | 1..137 | 1..137 | 563 | 94.2 | Plus |
Dsim\GD15962-PA | 96 | GD15962-PA | 3..96 | 256..349 | 495 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18847-PA | 357 | GJ18847-PA | 1..357 | 1..349 | 1404 | 78.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25492-PA | 376 | GK25492-PA | 1..376 | 1..349 | 1220 | 68.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17589-PA | 349 | GE17589-PA | 1..349 | 1..349 | 1809 | 97.4 | Plus |
Translation from 184 to 1233
> LD30509.hyp MGAEHSQQRAEADGHEIFDGRQPPGAGTGSLGDGSSMMLAATAAANKRRG VGHRQQTTGGAGGTVVGPGAGVGPASIVIASKQIIAEAASPGGSELSRPP SPPLSVCSDLPYVSYTDRPIGDSPKIRSKPAHMLQQSSASRAAARKSHPS GLTSAVKPKRPQSTASSHNIVIVRPGAIDAGEDVDMDLARLRNIPQFLPV LRESITSATNTRDAEILERLNSQHLINICTRMQTHLNLCASYVASEQNHL VERTKVVSNSITTLFAGFVDMQKTYASYAEQFAKIRSISHQLSRCNSLLH ENIASLEAINNFLDDEDRLEPFVWRTDDNKLRGEAEGAIGGNSSRLWRL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11802-PA | 349 | CG11802-PA | 1..349 | 1..349 | 1781 | 100 | Plus |