BDGP Sequence Production Resources |
Search the DGRC for LD30516
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 305 |
Well: | 16 |
Vector: | pOT2 |
Associated Gene/Transcript | CG18616-RA |
Protein status: | LD30516.pep: gold |
Sequenced Size: | 2182 |
Gene | Date | Evidence |
---|---|---|
CG18616 | 2013-01-04 | Manual selection by Ken Wan |
2182 bp assembled on 2013-08-21
GenBank Submission: BT150205.1
> LD30516.complete TGGATTGGTTCGGTTTTTTTGTTTTTATTTATTTTTGGCATGGACTCGGC GGAATCCCCCACCAAAACGCAGGCCGGCGAGGACGAGAACTACAGTCTGC TGTGCCAGGCGCACGAGCAGTTCAACAACTCGGAGTTTGATCGCTGCTTG GAACTGCTCCAGGAGTTGGAGACGCGCGGCGAGAGCAGTGGTCCTGTCCT GCGGCACAACCGGGCGGTGGTCAGCTACTACAAAACCGGGTGCACCCAAC ACTCCGTCCTGCTGAAAGAACTGGAGGCTCTAACCGCCGATGCAGATGCG CCCGGAGACGTGTCCAGCGGGCTGAGCCTTAAGCAGGGAGCTGCCGCCGC CACTGTTGCTCGTTACAACCGGGCGGTCATCTATTATCACCGCCATATGT TCGGCACGGCACTGGAGAAACTAGCACCACTAGTGGCTCGTCTGGAAGCC CTGGAGAAGGCAATGGCAGCGCTGGTGGCCACACTACAGCTACAGCTGCT GCTGGCCACCAATCAACTAAACCGAGCCGAGGCCTTTCTGGATTACTTGC AGTACAAGCTTAACCTGGTGGCCACAGCGCCTAGCAGCAATGCGGCCGAA GAGGCAGCTGTTGTCGGCACAGCACCTCCGTCAGCAGCGACGAACAGTTC AGTGGTGGCCTCACCAGGAGGAGCAGCTGTGGAGGGAGCTGTGCCCGGTC TGGGCGGTAGTCTGCAGCTCTTGCAGCTAATAACGCTCGTGCTTAACCGA AAACCGGTGGTTATTCAGGAAGACGGCACGCCGGAGTACGCTGCTCTGAA GGCTCAGCAGTACTACATCATGAAGGATTTTCAGATGGCCGCCAAGCAGC TTATGCGAATCAATAACGAGTGTACACAAGCGGGCACTATAACCCCCCAG CTGAGCACGTGCATTGCCAACAATATGGGAGTGATACACTTAAGAGTGCG TCACTATGCCATCGCCGCCAAGTTCTTCCAAAATGCGCTCAACTTTGACC AGCAGCTGGCGCGAAATTTGCGCCAGAGTACGCTGCAAACCATGAGTTCG GCACGGTCCTGCGAGATCCTTTACAACCTCGGTGTGGCCATGTTGCACCT ACGACGCCCCAAGGAGGCGTTTCAGTGCTTTCTGGTTCCCGTTAAGCAAT TCCACAGCAATCCACGTCTTTGGCTGCGCATGGCTGAGGCCTGCATCATG GAGCATGAGGCGAAACTAGTGGAGGAGGAGCGCCAGTCGCAGTCAGAAAC GCCATCAACAAAGCCATACGCTCCTCAATCGGCGGGAGTTCCAGAGCCCA CGCTGGAATTCGCTGTCTTGTGTCTACGTAGCGCGTTAACGCTTACGCAG CACTACAAGACGAGGTTTCACATGGCGGCGGTCTCCTCGGAGGATGTGGA AGCACCCGAACCCAAGGACCCAACTCAGGAGAGTTGGCGTCATCCCCAGG ACAATAACTTCTGCAATCCCTCGAAGCCAGTCAGCCTAGAGTCTTTGGAA AACATGATGGCTGCCATATATGCTGCTCACAGCTTCGTCTCGCTGCGCCT AGGCGATCATGTGACCGCGCTCGAGATGTCGGAAAAACTGCTGGCCTGTG AACGCTTGTCCGATGCACACAAATTGCTAGGTCACATGTACGCTGGCGAG GCGTTGATGCTTATGGACAAGGCCAGCGAGGCACGCGACCATTTGGACCC TACTTTTGTGGGCACACTAAACGCCTTCGATTTTGAGACGCGTGACTGGC AACTGAAGTCGGTGGACGCCGCTCAGAACGTTGTGCGGTATAATCTGGCC GTTGCCATGGCTCTACAGAACGACCTGCCTCAAGCTAAAGCACTCCTGGC CAATTTAACTCATTCGCTGGTTGCCAACAAGGCGCTTGCTTTGCGACGCT TCATGGACCTCAAAATGGGTCCCGTTCCTGGCGGGACGCCGAGTTAGACA ACAAATTGTGTATATAACTAGACGGAATTAAAGTGCAAGAATGAAATGAC GAGGAAGCGAACTATTTGTTTGACGATCATCAGTTTTTCAGCATTTTACA GGGTGCAAACAAGGTGTATAAAACAATGTCTGTTAACTAATCCATATGTG CTTATATATTTGTACACAGAGAATTGGTGTTGGCAATAGCAAATTATCTC ACAATATTTTAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 8456139..8456894 | 129..884 | 3780 | 100 | Plus |
chr3R | 27901430 | chr3R | 8457913..8458450 | 1623..2160 | 2690 | 100 | Plus |
chr3R | 27901430 | chr3R | 8457496..8457846 | 1272..1622 | 1755 | 100 | Plus |
chr3R | 27901430 | chr3R | 8456954..8457282 | 884..1212 | 1645 | 100 | Plus |
chr3R | 27901430 | chr3R | 8455937..8456064 | 1..128 | 640 | 100 | Plus |
chr3R | 27901430 | chr3R | 8457378..8457437 | 1212..1271 | 300 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 12630878..12631633 | 129..884 | 3780 | 100 | Plus |
3R | 32079331 | 3R | 12632651..12633189 | 1623..2161 | 2695 | 100 | Plus |
3R | 32079331 | 3R | 12632235..12632585 | 1272..1622 | 1755 | 100 | Plus |
3R | 32079331 | 3R | 12631693..12632021 | 884..1212 | 1645 | 100 | Plus |
3R | 32079331 | 3R | 12630676..12630803 | 1..128 | 640 | 100 | Plus |
3R | 32079331 | 3R | 12632117..12632176 | 1212..1271 | 300 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 8455937..8456064 | 1..128 | 100 | -> | Plus |
chr3R | 8456139..8456894 | 129..884 | 100 | -> | Plus |
chr3R | 8456955..8457282 | 885..1212 | 100 | -> | Plus |
chr3R | 8457379..8457437 | 1213..1271 | 100 | -> | Plus |
chr3R | 8457496..8457846 | 1272..1622 | 100 | -> | Plus |
chr3R | 8457913..8458450 | 1623..2160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18616-RA | 1..1908 | 40..1947 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Not10-RA | 1..1908 | 40..1947 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18616-RA | 30..2026 | 1..1997 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Not10-RA | 30..2026 | 1..1997 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12631694..12632021 | 885..1212 | 100 | -> | Plus |
3R | 12632118..12632176 | 1213..1271 | 100 | -> | Plus |
3R | 12630676..12630803 | 1..128 | 100 | -> | Plus |
3R | 12630878..12631633 | 129..884 | 100 | -> | Plus |
3R | 12632235..12632585 | 1272..1622 | 100 | -> | Plus |
3R | 12632651..12633188 | 1623..2160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12631694..12632021 | 885..1212 | 100 | -> | Plus |
3R | 12632118..12632176 | 1213..1271 | 100 | -> | Plus |
3R | 12630676..12630803 | 1..128 | 100 | -> | Plus |
3R | 12630878..12631633 | 129..884 | 100 | -> | Plus |
3R | 12632235..12632585 | 1272..1622 | 100 | -> | Plus |
3R | 12632651..12633188 | 1623..2160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12631694..12632021 | 885..1212 | 100 | -> | Plus |
3R | 12632118..12632176 | 1213..1271 | 100 | -> | Plus |
3R | 12630676..12630803 | 1..128 | 100 | -> | Plus |
3R | 12630878..12631633 | 129..884 | 100 | -> | Plus |
3R | 12632235..12632585 | 1272..1622 | 100 | -> | Plus |
3R | 12632651..12633188 | 1623..2160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 8456398..8456525 | 1..128 | 100 | -> | Plus |
arm_3R | 8456600..8457355 | 129..884 | 100 | -> | Plus |
arm_3R | 8457416..8457743 | 885..1212 | 100 | -> | Plus |
arm_3R | 8457840..8457898 | 1213..1271 | 100 | -> | Plus |
arm_3R | 8457957..8458307 | 1272..1622 | 100 | -> | Plus |
arm_3R | 8458373..8458910 | 1623..2160 | 100 | Plus |
Translation from 0 to 1946
> LD30516.hyp WIGSVFLFLFIFGMDSAESPTKTQAGEDENYSLLCQAHEQFNNSEFDRCL ELLQELETRGESSGPVLRHNRAVVSYYKTGCTQHSVLLKELEALTADADA PGDVSSGLSLKQGAAAATVARYNRAVIYYHRHMFGTALEKLAPLVARLEA LEKAMAALVATLQLQLLLATNQLNRAEAFLDYLQYKLNLVATAPSSNAAE EAAVVGTAPPSAATNSSVVASPGGAAVEGAVPGLGGSLQLLQLITLVLNR KPVVIQEDGTPEYAALKAQQYYIMKDFQMAAKQLMRINNECTQAGTITPQ LSTCIANNMGVIHLRVRHYAIAAKFFQNALNFDQQLARNLRQSTLQTMSS ARSCEILYNLGVAMLHLRRPKEAFQCFLVPVKQFHSNPRLWLRMAEACIM EHEAKLVEEERQSQSETPSTKPYAPQSAGVPEPTLEFAVLCLRSALTLTQ HYKTRFHMAAVSSEDVEAPEPKDPTQESWRHPQDNNFCNPSKPVSLESLE NMMAAIYAAHSFVSLRLGDHVTALEMSEKLLACERLSDAHKLLGHMYAGE ALMLMDKASEARDHLDPTFVGTLNAFDFETRDWQLKSVDAAQNVVRYNLA VAMALQNDLPQAKALLANLTHSLVANKALALRRFMDLKMGPVPGGTPS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Not10-PA | 635 | CG18616-PA | 1..635 | 14..648 | 3229 | 100 | Plus |
Translation from 0 to 1946
> LD30516.pep WIGSVFLFLFIFGMDSAESPTKTQAGEDENYSLLCQAHEQFNNSEFDRCL ELLQELETRGESSGPVLRHNRAVVSYYKTGCTQHSVLLKELEALTADADA PGDVSSGLSLKQGAAAATVARYNRAVIYYHRHMFGTALEKLAPLVARLEA LEKAMAALVATLQLQLLLATNQLNRAEAFLDYLQYKLNLVATAPSSNAAE EAAVVGTAPPSAATNSSVVASPGGAAVEGAVPGLGGSLQLLQLITLVLNR KPVVIQEDGTPEYAALKAQQYYIMKDFQMAAKQLMRINNECTQAGTITPQ LSTCIANNMGVIHLRVRHYAIAAKFFQNALNFDQQLARNLRQSTLQTMSS ARSCEILYNLGVAMLHLRRPKEAFQCFLVPVKQFHSNPRLWLRMAEACIM EHEAKLVEEERQSQSETPSTKPYAPQSAGVPEPTLEFAVLCLRSALTLTQ HYKTRFHMAAVSSEDVEAPEPKDPTQESWRHPQDNNFCNPSKPVSLESLE NMMAAIYAAHSFVSLRLGDHVTALEMSEKLLACERLSDAHKLLGHMYAGE ALMLMDKASEARDHLDPTFVGTLNAFDFETRDWQLKSVDAAQNVVRYNLA VAMALQNDLPQAKALLANLTHSLVANKALALRRFMDLKMGPVPGGTPS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17110-PA | 646 | GF17110-PA | 1..640 | 14..644 | 2696 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19082-PA | 636 | GG19082-PA | 1..636 | 14..648 | 3106 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18702-PA | 635 | GH18702-PA | 1..635 | 14..648 | 2189 | 69.9 | Plus |
Dgri\GH22207-PA | 413 | GH22207-PA | 1..397 | 14..404 | 1378 | 72.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Not10-PB | 635 | CG18616-PB | 1..635 | 14..648 | 3229 | 100 | Plus |
Not10-PA | 635 | CG18616-PA | 1..635 | 14..648 | 3229 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22849-PA | 648 | GI22849-PA | 1..643 | 14..640 | 2253 | 71.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13920-PA | 641 | GL13920-PA | 1..629 | 14..640 | 2504 | 79.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15014-PA | 641 | GA15014-PA | 1..629 | 14..640 | 2502 | 79.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24046-PA | 635 | GM24046-PA | 1..635 | 14..648 | 3346 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18846-PA | 635 | GD18846-PA | 1..635 | 14..648 | 3346 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14150-PA | 637 | GJ14150-PA | 1..632 | 14..640 | 2280 | 73 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13721-PA | 653 | GK13721-PA | 1..644 | 14..636 | 2218 | 71.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26206-PA | 636 | GE26206-PA | 1..636 | 14..648 | 3310 | 97.2 | Plus |