Clone LD30575 Report

Search the DGRC for LD30575

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:305
Well:75
Vector:pOT2
Associated Gene/TranscriptHrs-RB
Protein status:LD30575.pep: gold
Preliminary Size:2914
Sequenced Size:2742

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG2903 2001-01-01 Release 2 assignment
CG2903 2001-07-04 Blastp of sequenced clone
CG2903 2003-01-01 Sim4 clustering to Release 3
Hrs 2008-04-29 Release 5.5 accounting
Hrs 2008-08-15 Release 5.9 accounting
Hrs 2008-12-18 5.12 accounting

Clone Sequence Records

LD30575.complete Sequence

2742 bp (2742 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051789

> LD30575.complete
CAGCACTAGCGCATTGCAGAAAATTTCTTTGCTTGCAAAACAATAATAAT
AAGCTTTCCTTATTTTAAACGAATAACAATAGAAAACCAACGACGAGAAG
CAGCATAAAAGAAAACAGAAAACATGTTTCGATCAAGTTTCGACAAAAAC
TTAGAAAATGCCACCAGTCACTTGCGTCTGGAGCCCGACTGGCCATCAAT
TCTTCTGATTTGCGATGAAATCAACCAGAAAGATGTCACTCCCAAGAATG
CCTTTGCCGCCATCAAGAAGAAGATGAACTCGCCCAACCCGCACTCCTCC
TGCTATTCCCTCCTGGTCCTCGAGAGCATCGTCAAGAACTGCGGCGCACC
CGTTCACGAGGAGGTGTTCACCAAGGAGAACTGCGAGATGTTCAGCAGTT
TCCTCGAGTCGACGCCCCACGAGAACGTGCGCCAGAAGATGCTGGAGCTG
GTGCAGACCTGGGCGTACGCCTTCCGCTCCTCGGACAAGTACCAGGCCAT
CAAGGACACCATGACCATCCTGAAGGCGAAGGGGCACACTTTCCCCGAAC
TTCGGGAGGCAGATGCCATGTTCACGGCGGACACGGCGCCCAACTGGGCA
GATGGCAGGGTATGCCATCGCTGTCGCGTGGAGTTCACCTTCACCAACCG
GAAGCACCACTGCCGGAACTGCGGCCAGGTCTTCTGTGGCCAATGCACGG
CCAAGCAGTGTCCGCTGCCCAAGTACGGCATCGAAAAGGAGGTGCGTGTG
TGCGACGGCTGCTTCGCTGCCCTCCAGCGTCCGACGAGCGGCAGTGGAGG
CGCTAAGTCCGGACCACGTCCGGCGGACAGCGAGCTACCGGCGGAGTATC
TGAACAGCACTTTGGCGCAGCAGGTGCAGACACCAGCTCGCAAGACCGAG
CAGGAACTCAAGGAGGAGGAGGAACTGCAGCTGGCGCTGGCCCTCAGTCA
ATCGGAAGCGGAGCAGCAGAAGCCCAAGCTGCAATCCCTGCCACCCGCTG
CCTATCGCATGCAGCAAAGGTCTCCCAGTCCGGAGGCACCGCCAGAACCC
AAGGAGTATCACCAGCAGCCGGAGGAGGCTACCAATCCGGAGCTGGCCAA
GTACTTGAACCGCAGCTACTGGGAGCAGCGCAAGATCAGCGAATCGTCAT
CCATGGCAAGTCCCTCGGCACCGAGCCCCATGCCACCAACGCCGCAGCCC
CAGCAGATCATGCCCCTGCAGGTCAAGAGTGCGGATGAAGTGCAGATCGA
TGAGTTTGCCGCCAATATGCGCACGCAGGTGGAGATCTTTGTTAACCGCA
TGAAGTCGAACTCGAGCCGCGGTCGCAGCATCTCCAACGACTCCTCTGTG
CAGACCCTCTTCATGACCCTGACCTCGTTGCACTCGCAGCAGTTGTCGTA
CATCAAGGAGATGGACGACAAGCGCATGTGGTACGAGCAGCTGCAGGACA
AGCTAACCCAGATCAAGGACTCGCGTGCTGCGCTGGATCAGCTGCGTCAG
GAGCATGTGGAGAAGCTGCGCAGGATCGCCGAGGAGCAGGAACGTCAGCG
ACAGATGCAGATGGCCCAGAAACTGGACATAATGCGCAAGAAGAAGCAGG
AGTATCTGCAGTATCAACGACAGCTAGCATTGCAGCGCATCCAGGAGCAG
GAGCGCGAGATGCAGCTGCGCCAGGAGCAGCAGAAGGCGCAGTATTTGAT
GGGCCAGTCGGCTCCACCTTTCCCCTACATGCCACCATCGGCGGTGCCAC
AACATGGTTCGCCCTCGCATCAGCTCAACAACGTTTATAATCCCTATGCT
GCCGGTGTGCCCGGCTATTTGCCTCAGGGTCCTGCACCGGCTCCCAACGG
ACATGGCCAGTTTCAGGCCATTCCGCCGGGCATGTACAATCCGGCAATAC
AGCAGCCGATGCCGCCGAATCTCCAGCCCGGCGGATTAATGCAACAGCCC
GCGCCACCTGGAAATCCCCAGATGATGCCGCCCATGCCCGAAAATCAGTT
TGCCAACAATCCTGCTGCTATCCTCCAGCTGCCGCAGCAGCATTCGATCG
CCCAGCCTCCTCAAATACCATTCCAACCGCAGCCTCAACAGATTCCTGGT
CAGCAGCCTCAACAGATTCCTGGTCAGCAGCCTCAACAGATTCCTGGTCA
GCAGCCTCAACAGATTCCTGGTCAGCAGCCACAGCAGATTCCTGTCCAGC
AACCTCAGCCACAACCCCAAATGGGTCACGTAATGCTGCAGCAGCACCAG
GCTCCTCCAGCAGCACAGGCACCTCCAGTTACCGAAATCGCCAACAATCA
AGTCCAAGCGGTGGCTGCTGCACCTGCTCCGCCGCAAAACGAACCGGGAC
CCGCGCCCGTTAAAGCTGAGGAGCCGGCTACGGCGGAACTGATTAGCTTT
GATTAATCCAAGAGATGTTATTCCATTTGTATTACCCTTCAGGGCTGGGT
CAGAAAGTTCTCGTGCGGCTGTTAAGCGAAAAAATGTATGTTTTGTTTAG
TTGAACGCGGTTATTAGTTACTATTTCAAAAGTTTTTGTTGCGAGAAAGA
GGAACATGATAAATTTTAAGTTTAGACCAAATCTATGGAGGTAAAAAGAT
AGTTGGAAAGTAGTGCTGCACGAGATCGAGGCCCGCCCTTTTATCACGTT
TTAACCGACTAATGTTATTCCACAATAAAAATAACTTTGTATTTTGAGAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

LD30575.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:31:12
Subject Length Description Subject Range Query Range Score Percent Strand
Hrs-RB 2761 Hrs-RB 37..2735 1..2699 13495 100 Plus
Hrs-RC 2665 Hrs-RC 49..2665 82..2698 13085 100 Plus
Hrs-RA 2251 Hrs-RA 58..2251 505..2698 10970 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:12:45
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 2741286..2743106 878..2698 8955 99.5 Plus
chr2L 23010047 chr2L 2740835..2741211 503..879 1870 99.7 Plus
chr2L 23010047 chr2L 2740251..2740516 240..505 1315 99.6 Plus
chr2L 23010047 chr2L 2739789..2739942 1..154 770 100 Plus
chr2L 23010047 chr2L 2742487..2742593 2103..2209 445 94.4 Plus
chr2L 23010047 chr2L 2742511..2742617 2079..2185 445 94.4 Plus
chr2L 23010047 chr2L 2740118..2740204 153..239 435 100 Plus
chr2L 23010047 chr2L 2742487..2742567 2127..2207 330 93.8 Plus
chr2L 23010047 chr2L 2742535..2742615 2079..2159 330 93.8 Plus
chr2L 23010047 chr2L 2742487..2742543 2151..2207 210 91.2 Plus
chr2L 23010047 chr2L 2742559..2742615 2079..2135 210 91.2 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:24:09 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:12:43
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2741557..2743378 878..2699 9110 100 Plus
2L 23513712 2L 2741106..2741482 503..879 1885 100 Plus
2L 23513712 2L 2740520..2740785 240..505 1330 100 Plus
2L 23513712 2L 2740058..2740211 1..154 770 100 Plus
2L 23513712 2L 2742758..2742864 2103..2209 445 94.4 Plus
2L 23513712 2L 2742782..2742888 2079..2185 445 94.4 Plus
2L 23513712 2L 2740387..2740473 153..239 435 100 Plus
2L 23513712 2L 2742758..2742838 2127..2207 330 93.8 Plus
2L 23513712 2L 2742806..2742886 2079..2159 330 93.8 Plus
2L 23513712 2L 2742758..2742814 2151..2207 210 91.2 Plus
2L 23513712 2L 2742830..2742886 2079..2135 210 91.2 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:53:24
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2741557..2743378 878..2699 9110 100 Plus
2L 23513712 2L 2741106..2741482 503..879 1885 100 Plus
2L 23513712 2L 2740520..2740785 240..505 1330 100 Plus
2L 23513712 2L 2740058..2740211 1..154 770 100 Plus
2L 23513712 2L 2740387..2740473 153..239 435 100 Plus
Blast to na_te.dros performed 2019-03-16 04:12:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2382..2629 2026..2271 156 54 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2680..2983 1388..1682 119 54 Plus

LD30575.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:13:52 Download gff for LD30575.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 2739789..2739942 1..154 100 -> Plus
chr2L 2740120..2740204 155..239 100 -> Plus
chr2L 2740251..2740515 240..504 99 -> Plus
chr2L 2740837..2741211 505..879 99 -> Plus
chr2L 2741288..2743106 880..2698 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:11:29 Download gff for LD30575.complete
Subject Subject Range Query Range Percent Splice Strand
Hrs-RC 1..2283 124..2406 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:19:46 Download gff for LD30575.complete
Subject Subject Range Query Range Percent Splice Strand
Hrs-RC 1..2283 124..2406 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:21:06 Download gff for LD30575.complete
Subject Subject Range Query Range Percent Splice Strand
Hrs-RB 1..2283 124..2406 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:51:22 Download gff for LD30575.complete
Subject Subject Range Query Range Percent Splice Strand
Hrs-RC 1..2283 124..2406 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:31:03 Download gff for LD30575.complete
Subject Subject Range Query Range Percent Splice Strand
Hrs-RB 1..2283 124..2406 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:15:52 Download gff for LD30575.complete
Subject Subject Range Query Range Percent Splice Strand
Hrs-RB 17..2713 1..2697 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:19:46 Download gff for LD30575.complete
Subject Subject Range Query Range Percent Splice Strand
Hrs-RB 17..2713 1..2697 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:21:06 Download gff for LD30575.complete
Subject Subject Range Query Range Percent Splice Strand
Hrs-RB 17..2714 1..2698 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:51:23 Download gff for LD30575.complete
Subject Subject Range Query Range Percent Splice Strand
Hrs-RB 17..2713 1..2697 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:31:03 Download gff for LD30575.complete
Subject Subject Range Query Range Percent Splice Strand
Hrs-RB 17..2714 1..2698 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:13:52 Download gff for LD30575.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2740058..2740211 1..154 100 -> Plus
2L 2740389..2740473 155..239 100 -> Plus
2L 2740520..2740784 240..504 100 -> Plus
2L 2741108..2741482 505..879 100 -> Plus
2L 2741559..2743377 880..2698 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:13:52 Download gff for LD30575.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2740058..2740211 1..154 100 -> Plus
2L 2740389..2740473 155..239 100 -> Plus
2L 2740520..2740784 240..504 100 -> Plus
2L 2741108..2741482 505..879 100 -> Plus
2L 2741559..2743377 880..2698 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:13:52 Download gff for LD30575.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2740058..2740211 1..154 100 -> Plus
2L 2740389..2740473 155..239 100 -> Plus
2L 2740520..2740784 240..504 100 -> Plus
2L 2741108..2741482 505..879 100 -> Plus
2L 2741559..2743377 880..2698 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:21:06 Download gff for LD30575.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2740058..2740211 1..154 100 -> Plus
arm_2L 2740389..2740473 155..239 100 -> Plus
arm_2L 2740520..2740784 240..504 100 -> Plus
arm_2L 2741108..2741482 505..879 100 -> Plus
arm_2L 2741559..2743377 880..2698 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:29:49 Download gff for LD30575.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2740058..2740211 1..154 100 -> Plus
2L 2740389..2740473 155..239 100 -> Plus
2L 2740520..2740784 240..504 100 -> Plus
2L 2741108..2741482 505..879 100 -> Plus
2L 2741559..2743377 880..2698 100   Plus

LD30575.pep Sequence

Translation from 123 to 2405

> LD30575.pep
MFRSSFDKNLENATSHLRLEPDWPSILLICDEINQKDVTPKNAFAAIKKK
MNSPNPHSSCYSLLVLESIVKNCGAPVHEEVFTKENCEMFSSFLESTPHE
NVRQKMLELVQTWAYAFRSSDKYQAIKDTMTILKAKGHTFPELREADAMF
TADTAPNWADGRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAKQCPLPK
YGIEKEVRVCDGCFAALQRPTSGSGGAKSGPRPADSELPAEYLNSTLAQQ
VQTPARKTEQELKEEEELQLALALSQSEAEQQKPKLQSLPPAAYRMQQRS
PSPEAPPEPKEYHQQPEEATNPELAKYLNRSYWEQRKISESSSMASPSAP
SPMPPTPQPQQIMPLQVKSADEVQIDEFAANMRTQVEIFVNRMKSNSSRG
RSISNDSSVQTLFMTLTSLHSQQLSYIKEMDDKRMWYEQLQDKLTQIKDS
RAALDQLRQEHVEKLRRIAEEQERQRQMQMAQKLDIMRKKKQEYLQYQRQ
LALQRIQEQEREMQLRQEQQKAQYLMGQSAPPFPYMPPSAVPQHGSPSHQ
LNNVYNPYAAGVPGYLPQGPAPAPNGHGQFQAIPPGMYNPAIQQPMPPNL
QPGGLMQQPAPPGNPQMMPPMPENQFANNPAAILQLPQQHSIAQPPQIPF
QPQPQQIPGQQPQQIPGQQPQQIPGQQPQQIPGQQPQQIPVQQPQPQPQM
GHVMLQQHQAPPAAQAPPVTEIANNQVQAVAAAPAPPQNEPGPAPVKAEE
PATAELISFD*

LD30575.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 15:15:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13888-PA 763 GF13888-PA 1..763 1..760 2859 81.2 Plus
Dana\GF22946-PA 985 GF22946-PA 901..961 158..215 197 52.5 Plus
Dana\GF15830-PA 700 GF15830-PA 8..159 4..155 188 26.8 Plus
Dana\GF25134-PA 529 GF25134-PA 13..165 1..149 184 30.5 Plus
Dana\GF15587-PA 3491 GF15587-PA 3431..3485 164..218 177 49.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 15:15:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24878-PA 762 GG24878-PA 1..648 1..643 3057 96.8 Plus
Dere\GG12136-PA 981 GG12136-PA 896..971 156..228 206 47.4 Plus
Dere\GG12059-PA 859 GG12059-PA 792..856 158..225 198 47.1 Plus
Dere\GG15377-PA 541 GG15377-PA 13..165 1..149 186 30.5 Plus
Dere\GG23682-PA 687 GG23682-PA 8..159 4..155 177 25.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 15:15:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11165-PA 738 GH11165-PA 1..595 1..595 2457 84 Plus
Dgri\GH18624-PA 1115 GH18624-PA 1020..1096 156..229 208 48.1 Plus
Dgri\GH22346-PA 1122 GH22346-PA 1059..1119 158..218 202 45.9 Plus
Dgri\GH13592-PA 742 GH13592-PA 8..149 4..145 185 27.3 Plus
Dgri\GH17951-PA 321 GH17951-PA 153..233 159..238 183 42.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:07:28
Subject Length Description Subject Range Query Range Score Percent Strand
Hrs-PC 760 CG2903-PC 1..760 1..760 4029 100 Plus
Hrs-PB 760 CG2903-PB 1..760 1..760 4029 100 Plus
Hrs-PA 647 CG2903-PA 15..647 128..760 3358 100 Plus
Wnk-PO 2243 CG7177-PO 723..1184 231..723 244 25 Plus
Wnk-PN 2441 CG7177-PN 921..1382 231..723 244 25 Plus
Wnk-PL 2441 CG7177-PL 921..1382 231..723 244 25 Plus
Wnk-PM 2462 CG7177-PM 921..1382 231..723 244 25 Plus
Ptip-PA 2294 CG32133-PA 328..790 216..758 236 23.2 Plus
Ptip-PA 2294 CG32133-PA 465..910 245..740 236 25 Plus
Ptip-PA 2294 CG32133-PA 847..1424 231..752 230 23.4 Plus
Ptip-PA 2294 CG32133-PA 560..1061 247..709 216 24.5 Plus
Ptip-PA 2294 CG32133-PA 689..1123 239..715 213 23.7 Plus
Ptip-PA 2294 CG32133-PA 779..1301 233..741 209 22.3 Plus
dikar-PG 3080 CG42799-PG 2271..2863 236..733 207 23.8 Plus
dikar-PC 3080 CG42799-PC 2271..2863 236..733 207 23.8 Plus
dikar-PD 3222 CG42799-PD 2413..3005 236..733 207 23.8 Plus
dikar-PF 3261 CG42799-PF 2413..3005 236..733 207 23.8 Plus
Sec24CD-PA 1193 CG10882-PA 32..296 499..755 203 30.1 Plus
Sec24CD-PB 1193 CG10882-PB 32..296 499..755 203 30.1 Plus
Sec24CD-PC 1231 CG10882-PC 32..296 499..755 203 30.1 Plus
CG44085-PM 864 CG44085-PM 86..592 223..717 199 23 Plus
CG44085-PO 2381 CG44085-PO 86..592 223..717 199 23 Plus
CG44085-PH 756 CG44085-PH 165..630 290..717 198 23.5 Plus
CG44085-PL 833 CG44085-PL 242..707 290..717 198 23.5 Plus
CG44085-PI 833 CG44085-PI 242..707 290..717 198 23.5 Plus
CG44085-PC 836 CG44085-PC 242..707 290..717 198 23.5 Plus
CG44085-PF 902 CG44085-PF 165..630 290..717 198 23.5 Plus
CG44085-PD 918 CG44085-PD 165..630 290..717 198 23.5 Plus
CG44085-PG 942 CG44085-PG 165..630 290..717 198 23.5 Plus
CG44085-PK 979 CG44085-PK 242..707 290..717 198 23.5 Plus
CG44085-PJ 979 CG44085-PJ 242..707 290..717 198 23.5 Plus
CG44085-PN 1007 CG44085-PN 242..707 290..717 198 23.5 Plus
CG44085-PP 2246 CG44085-PP 138..603 290..717 198 23.5 Plus
Wnk-PO 2243 CG7177-PO 717..1178 244..741 196 23.7 Plus
Wnk-PN 2441 CG7177-PN 915..1376 244..741 196 23.7 Plus
Wnk-PL 2441 CG7177-PL 915..1376 244..741 196 23.7 Plus
Wnk-PM 2462 CG7177-PM 915..1376 244..741 196 23.7 Plus
Ptip-PA 2294 CG32133-PA 180..450 414..697 196 27 Plus
CG15021-PA 420 CG15021-PA 72..273 528..742 195 33 Plus
Sec24CD-PA 1193 CG10882-PA 205..436 529..749 193 31.6 Plus
Sec24CD-PB 1193 CG10882-PB 205..436 529..749 193 31.6 Plus
Sec24CD-PC 1231 CG10882-PC 205..436 529..749 193 31.6 Plus
CG6051-PD 988 CG6051-PD 903..979 156..229 192 48.1 Plus
CG6051-PC 989 CG6051-PC 904..980 156..229 192 48.1 Plus
CG6051-PB 989 CG6051-PB 904..980 156..229 192 48.1 Plus
CG41099-PE 1111 CG41099-PE 1044..1104 158..218 190 50.8 Plus
CG41099-PB 1111 CG41099-PB 1044..1104 158..218 190 50.8 Plus
CG41099-PD 1122 CG41099-PD 1055..1115 158..218 190 50.8 Plus
CG41099-PC 1124 CG41099-PC 1057..1117 158..218 190 50.8 Plus
CG34401-PB 2102 CG34401-PB 1584..1860 434..742 184 28.1 Plus
CG34401-PA 2103 CG34401-PA 1585..1861 434..742 184 28.1 Plus
CG15021-PA 420 CG15021-PA 123..306 528..745 182 30.8 Plus
CG34401-PB 2102 CG34401-PB 1611..1914 481..751 181 27.8 Plus
CG34401-PA 2103 CG34401-PA 1612..1915 481..751 181 27.8 Plus
NUCB1-PA 569 CG32190-PA 185..553 366..741 178 25.8 Plus
CG34417-PW 4808 CG34417-PW 4331..4414 619..708 178 48.4 Plus
CG34417-PL 4862 CG34417-PL 4385..4468 619..708 178 48.4 Plus
CG34417-PX 4925 CG34417-PX 4448..4531 619..708 178 48.4 Plus
CG34417-PU 4979 CG34417-PU 4502..4585 619..708 178 48.4 Plus
CG34417-PJ 4979 CG34417-PJ 4502..4585 619..708 178 48.4 Plus
CG34417-PH 4979 CG34417-PH 4502..4585 619..708 178 48.4 Plus
CG34417-PR 5128 CG34417-PR 4502..4585 619..708 178 48.4 Plus
CG34417-PT 5182 CG34417-PT 4502..4585 619..708 178 48.4 Plus
CG3529-PC 526 CG3529-PC 13..165 1..149 177 30.5 Plus
CG3529-PD 540 CG3529-PD 13..165 1..149 177 30.5 Plus
CG3529-PB 543 CG3529-PB 13..165 1..149 177 30.5 Plus
Rbp-PO 1473 CG43073-PO 1011..1217 517..742 177 30.8 Plus
CG34417-PW 4808 CG34417-PW 4305..4396 609..699 165 44.7 Plus
CG34417-PL 4862 CG34417-PL 4359..4450 609..699 165 44.7 Plus
CG34417-PX 4925 CG34417-PX 4422..4513 609..699 165 44.7 Plus
CG34417-PU 4979 CG34417-PU 4476..4567 609..699 165 44.7 Plus
CG34417-PJ 4979 CG34417-PJ 4476..4567 609..699 165 44.7 Plus
CG34417-PH 4979 CG34417-PH 4476..4567 609..699 165 44.7 Plus
CG34417-PR 5128 CG34417-PR 4476..4567 609..699 165 44.7 Plus
CG34417-PT 5182 CG34417-PT 4476..4567 609..699 165 44.7 Plus
CG44085-PH 756 CG44085-PH 197..455 521..751 164 29.7 Plus
CG44085-PL 833 CG44085-PL 274..532 521..751 164 29.7 Plus
CG44085-PI 833 CG44085-PI 274..532 521..751 164 29.7 Plus
CG44085-PC 836 CG44085-PC 274..532 521..751 164 29.7 Plus
CG44085-PF 902 CG44085-PF 197..455 521..751 164 29.7 Plus
CG44085-PD 918 CG44085-PD 197..455 521..751 164 29.7 Plus
CG44085-PG 942 CG44085-PG 197..455 521..751 164 29.7 Plus
CG44085-PK 979 CG44085-PK 274..532 521..751 164 29.7 Plus
CG44085-PJ 979 CG44085-PJ 274..532 521..751 164 29.7 Plus
CG44085-PN 1007 CG44085-PN 274..532 521..751 164 29.7 Plus
CG44085-PP 2246 CG44085-PP 170..428 521..751 164 29.7 Plus
dikar-PG 3080 CG42799-PG 2176..2412 518..753 163 29.7 Plus
dikar-PC 3080 CG42799-PC 2176..2412 518..753 163 29.7 Plus
dikar-PD 3222 CG42799-PD 2318..2554 518..753 163 29.7 Plus
dikar-PF 3261 CG42799-PF 2318..2554 518..753 163 29.7 Plus
CG15021-PA 420 CG15021-PA 181..393 530..745 163 30.1 Plus
Wnk-PO 2243 CG7177-PO 584..923 427..728 161 26.3 Plus
Wnk-PN 2441 CG7177-PN 782..1121 427..728 161 26.3 Plus
Wnk-PL 2441 CG7177-PL 782..1121 427..728 161 26.3 Plus
Wnk-PM 2462 CG7177-PM 782..1121 427..728 161 26.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 15:15:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17877-PA 750 GI17877-PA 1..619 1..634 2485 83.3 Plus
Dmoj\GI24295-PA 1051 GI24295-PA 960..1022 156..215 202 52.4 Plus
Dmoj\GI23983-PA 1133 GI23983-PA 1070..1130 158..218 200 45.9 Plus
Dmoj\GI23591-PA 725 GI23591-PA 8..148 4..144 186 26.8 Plus
Dmoj\GI11944-PA 546 GI11944-PA 13..165 1..149 181 30.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 15:15:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26577-PA 765 GL26577-PA 1..260 1..253 1315 88.1 Plus
Dper\GL23610-PA 1009 GL23610-PA 914..974 158..215 197 52.5 Plus
Dper\GL19123-PA 683 GL19123-PA 8..161 4..157 189 27.7 Plus
Dper\GL17879-PA 467 GL17879-PA 13..165 1..149 180 29.9 Plus
Dper\GL14261-PA 310 GL14261-PA 154..224 160..230 160 41.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 15:15:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15506-PA 748 GA15506-PA 1..748 1..760 2572 78.4 Plus
Dpse\GA27480-PA 1153 GA27480-PA 1086..1151 158..226 207 46.4 Plus
Dpse\GA19323-PB 1007 GA19323-PB 912..972 158..215 198 52.5 Plus
Dpse\GA19660-PA 683 GA19660-PA 8..161 4..157 189 27.7 Plus
Dpse\GA17503-PA 552 GA17503-PA 13..165 1..149 180 29.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 15:15:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18359-PA 747 GM18359-PA 1..747 1..760 3835 95.9 Plus
Dsec\GM10129-PA 975 GM10129-PA 890..966 156..229 210 48.1 Plus
Dsec\GM25149-PA 536 GM25149-PA 13..165 1..149 188 30.5 Plus
Dsec\GM18758-PA 692 GM18758-PA 8..159 4..155 178 25.5 Plus
Dsec\GM18578-PA 3488 GM18578-PA 3428..3482 164..218 177 49.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 15:15:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23175-PA 759 GD23175-PA 1..759 1..760 3866 96.7 Plus
Dsim\GD18091-PA 820 GD18091-PA 735..811 156..229 206 48.1 Plus
Dsim\GD14183-PA 532 GD14183-PA 11..154 10..149 182 31 Plus
Dsim\GD23740-PA 690 GD23740-PA 8..159 4..155 179 25.5 Plus
Dsim\GD23368-PA 689 GD23368-PA 629..683 164..218 174 49.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 15:15:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17377-PA 734 GJ17377-PA 1..579 1..589 2484 87.6 Plus
Dvir\GJ23073-PA 1052 GJ23073-PA 967..1029 156..215 202 52.4 Plus
Dvir\GJ11139-PA 912 GJ11139-PA 849..909 158..218 197 45.9 Plus
Dvir\GJ12170-PA 552 GJ12170-PA 13..165 1..149 181 30.5 Plus
Dvir\GJ15404-PA 3480 GJ15404-PA 3407..3474 154..218 181 44.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 15:15:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24576-PA 738 GK24576-PA 1..609 1..614 2317 80.9 Plus
Dwil\GK22512-PA 993 GK22512-PA 900..962 156..215 206 54 Plus
Dwil\GK14353-PA 1135 GK14353-PA 1068..1132 158..225 203 47.1 Plus
Dwil\GK16096-PA 330 GK16096-PA 153..257 159..267 186 35.5 Plus
Dwil\GK17578-PA 561 GK17578-PA 13..165 1..149 181 30.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 15:15:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18175-PA 765 GE18175-PA 1..765 1..760 3900 97.3 Plus
Dyak\GE10583-PA 984 GE10583-PA 899..974 156..228 206 47.4 Plus
Dyak\GE20841-PA 541 GE20841-PA 13..165 1..149 188 30.5 Plus
Dyak\GE18494-PA 689 GE18494-PA 8..159 4..155 183 26.1 Plus
Dyak\GE25712-PA 3491 GE25712-PA 3431..3485 164..218 178 49.1 Plus

LD30575.hyp Sequence

Translation from 123 to 2405

> LD30575.hyp
MFRSSFDKNLENATSHLRLEPDWPSILLICDEINQKDVTPKNAFAAIKKK
MNSPNPHSSCYSLLVLESIVKNCGAPVHEEVFTKENCEMFSSFLESTPHE
NVRQKMLELVQTWAYAFRSSDKYQAIKDTMTILKAKGHTFPELREADAMF
TADTAPNWADGRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAKQCPLPK
YGIEKEVRVCDGCFAALQRPTSGSGGAKSGPRPADSELPAEYLNSTLAQQ
VQTPARKTEQELKEEEELQLALALSQSEAEQQKPKLQSLPPAAYRMQQRS
PSPEAPPEPKEYHQQPEEATNPELAKYLNRSYWEQRKISESSSMASPSAP
SPMPPTPQPQQIMPLQVKSADEVQIDEFAANMRTQVEIFVNRMKSNSSRG
RSISNDSSVQTLFMTLTSLHSQQLSYIKEMDDKRMWYEQLQDKLTQIKDS
RAALDQLRQEHVEKLRRIAEEQERQRQMQMAQKLDIMRKKKQEYLQYQRQ
LALQRIQEQEREMQLRQEQQKAQYLMGQSAPPFPYMPPSAVPQHGSPSHQ
LNNVYNPYAAGVPGYLPQGPAPAPNGHGQFQAIPPGMYNPAIQQPMPPNL
QPGGLMQQPAPPGNPQMMPPMPENQFANNPAAILQLPQQHSIAQPPQIPF
QPQPQQIPGQQPQQIPGQQPQQIPGQQPQQIPGQQPQQIPVQQPQPQPQM
GHVMLQQHQAPPAAQAPPVTEIANNQVQAVAAAPAPPQNEPGPAPVKAEE
PATAELISFD*

LD30575.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:53:08
Subject Length Description Subject Range Query Range Score Percent Strand
Hrs-PC 760 CG2903-PC 1..760 1..760 4029 100 Plus
Hrs-PB 760 CG2903-PB 1..760 1..760 4029 100 Plus
Hrs-PA 647 CG2903-PA 15..647 128..760 3358 100 Plus
Wnk-PN 2441 CG7177-PN 921..1382 231..723 244 25 Plus
Wnk-PL 2441 CG7177-PL 921..1382 231..723 244 25 Plus
Wnk-PN 2441 CG7177-PN 915..1376 244..741 196 23.7 Plus
Wnk-PN 2441 CG7177-PN 782..1121 427..728 161 26.3 Plus