BDGP Sequence Production Resources |
Search the DGRC for LD30622
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 306 |
Well: | 22 |
Vector: | pOT2 |
Associated Gene/Transcript | Tfb2-RA |
Protein status: | LD30622.pep: validated not full length |
Preliminary Size: | 1675 |
Sequenced Size: | 1699 |
Gene | Date | Evidence |
---|---|---|
CG7764 | 2001-09-19 | Blastp of sequenced clone |
Tfb2 | 2008-04-29 | Release 5.5 accounting |
Tfb2 | 2008-08-15 | Release 5.9 accounting |
Tfb2 | 2008-12-18 | 5.12 accounting |
1699 bp (1699 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058612
> LD30622.complete CCGACACGAAATCCGGTAGTGGTCGGCATTCGGCTGCCGGGGGAAGTGGA AACGCCGTCCTGTCGCCCTTGGGGCAGGGTCCTGCGAACTTGGAGTGTAA GGACTTTCAGGAGTATCTGCGCACCCGCCAAACGCCAGAGTCGCTGGAGA AGCTGTACAACTATCCGCCCATTTGTTTGGCCGTTTTTCGGGAGCTTCCA GAGATAGCCCGGCAGTTTATCATAAGGATACTGTTCGTGGATCAGCCTGT GCCACAAGCGGTGGTCACATCATGGGGTGCCCAACGTTGTGCCAAGGAGC AAGCCGAGGCAACCAGCTGCCTGACGGCTTTGAACGTCTGGCGGGTCACA GCCATTCCGGGTGGCCTTTCTGCGTGGGAGCTCTCGCCCACCTTCAAGAA AAGCGTACGCCAGGTGCTGCTGGGCGGCGGAAAACCTTGGCCTATGACCA ACACGCTGGATAAGGACTCGAAGCCCAGGGACATTGCTTTTCTGGATACA TACGCCATGTCCCGCTGGCGTTGCGTGTTGCACTACATGGTCGGCACCGG AAATCGCAATGGCACCGATGCGGAGGCCATTAGTCCGGACGCCGTTCGGA TTCTGCTGCACGCCAATCTCATGAAACGTGATGAACGAGACGGTATCACA ATAACCCGGCAGGGCTTTCAGTTCCTGCTGCTGGACACGCGAGCTCAGGT GTGGCATTTTATGCTACAGTACCTGGACACGTGCGAAGAAAGAGGAATCA GCCTGCCGGAATGCTTGTCCATGTTGTTCCAGCTCAGTTTTTCAACGCTG GGCAGGGATTACAGTTCCGAGGGCATGAACAGTCAGATGCTGACATTCCT GCAGCATCTACGGGAGTTTGGACTGGTCTTCCAACGTAAGCGTAAGGAGG GACGCTTCTATCCCACACGTTTGGCTCTGAATGTGACAAGCAAGGAGGCG GCTGCGACTGCATCTGTGGCCATGGATGAGGAGGCCACTCAGGACTGTGG CTACATTGTGGTGGAGACGAACTACCGAGTGTATGCCTACACTGATTCTC CGCTCCAGGTAGCCGTGTTAGGTCTGTTCACGGAGCTTCTCTACCGCTTT CCCAATCTCGTCGTGGGCGTGCTAACCCGCGATTCAGTGCGCCAGGCGTT GCGTGGCGGTATCACGGCAGAGCAGATTGTCTCGTATCTGGAGCAGTATG CGCATCCCAATATGCGCATGGTCGAGTCAGCCATTCACTCTAAATCCTGC CTGCCACCCACAGTCGTTGATCAAATTAAGCTGTGGGAATTAGAGCGAAA TCGCTTCACCTACACCGAAGGCGTGCTGTACAATCAGTTCCTCTCGCATA CAGATTTCGTAACGCTACGAGACTACGCCCAGTCGATCCACATGCTGGTG TGGCAAAATGAGCGAACTCGCACAATGGTGGTGCAAAAGAATGGCCACGA CGATGTCAAGCGTTACTGGAAGAAGTACTCTAAGAGTGGTGTTTAGCCCG GTATTACGACCAATTATTGGGAAGTTATTTTAGAAGTAACATCTGTGCCC ATTTTGTTACAAGCTAAAATTTTAAAATATGGTTTAATAAGGGAGTGTGG GATTACACATTTATCATCGACATTCAACATACAAGTGGAATAAAATTAAA ATACACAAGTATCATACACATAAAAACAGAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mrn-RA | 1918 | mrn-RA | 174..1856 | 1..1683 | 8415 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 15568698..15570079 | 296..1679 | 99 | <- | Minus |
chr3L | 15570135..15570429 | 1..295 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tfb2-RA | 5..1500 | 1..1496 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mrn-RA | 5..1500 | 1..1496 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mrn-RA | 5..1500 | 1..1496 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tfb2-RA | 5..1500 | 1..1496 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mrn-RA | 5..1500 | 1..1496 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tfb2-RA | 174..1852 | 1..1679 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mrn-RA | 174..1852 | 1..1679 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mrn-RA | 36..1714 | 1..1679 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tfb2-RA | 174..1852 | 1..1679 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mrn-RA | 36..1714 | 1..1679 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15578769..15580152 | 296..1679 | 100 | <- | Minus |
3L | 15580208..15580502 | 1..295 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15578769..15580152 | 296..1679 | 100 | <- | Minus |
3L | 15580208..15580502 | 1..295 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15578769..15580152 | 296..1679 | 100 | <- | Minus |
3L | 15580208..15580502 | 1..295 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 15571869..15573252 | 296..1679 | 100 | <- | Minus |
arm_3L | 15573308..15573602 | 1..295 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15571869..15573252 | 296..1679 | 100 | <- | Minus |
3L | 15573308..15573602 | 1..295 | 100 | Minus |
Translation from 2 to 1495
> LD30622.pep DTKSGSGRHSAAGGSGNAVLSPLGQGPANLECKDFQEYLRTRQTPESLEK LYNYPPICLAVFRELPEIARQFIIRILFVDQPVPQAVVTSWGAQRCAKEQ AEATSCLTALNVWRVTAIPGGLSAWELSPTFKKSVRQVLLGGGKPWPMTN TLDKDSKPRDIAFLDTYAMSRWRCVLHYMVGTGNRNGTDAEAISPDAVRI LLHANLMKRDERDGITITRQGFQFLLLDTRAQVWHFMLQYLDTCEERGIS LPECLSMLFQLSFSTLGRDYSSEGMNSQMLTFLQHLREFGLVFQRKRKEG RFYPTRLALNVTSKEAAATASVAMDEEATQDCGYIVVETNYRVYAYTDSP LQVAVLGLFTELLYRFPNLVVGVLTRDSVRQALRGGITAEQIVSYLEQYA HPNMRMVESAIHSKSCLPPTVVDQIKLWELERNRFTYTEGVLYNQFLSHT DFVTLRDYAQSIHMLVWQNERTRTMVVQKNGHDDVKRYWKKYSKSGV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10392-PA | 497 | GF10392-PA | 6..496 | 6..496 | 2412 | 91 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13537-PA | 499 | GG13537-PA | 3..499 | 1..497 | 2638 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16811-PA | 493 | GH16811-PA | 3..492 | 1..496 | 2385 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mrn-PA | 499 | CG7764-PA | 3..499 | 1..497 | 2602 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12214-PA | 492 | GI12214-PA | 3..491 | 1..496 | 2313 | 86.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25529-PA | 494 | GL25529-PA | 3..493 | 1..496 | 2453 | 91.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20571-PA | 494 | GA20571-PA | 3..493 | 1..496 | 2453 | 91.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24480-PA | 499 | GM24480-PA | 3..499 | 1..497 | 2680 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12553-PA | 500 | GD12553-PA | 3..500 | 1..497 | 2664 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11446-PA | 492 | GJ11446-PA | 3..491 | 1..496 | 2384 | 89.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20438-PA | 512 | GK20438-PA | 3..511 | 1..496 | 2404 | 87.6 | Plus |
Translation from 2 to 1495
> LD30622.hyp DTKSGSGRHSAAGGSGNAVLSPLGQGPANLECKDFQEYLRTRQTPESLEK LYNYPPICLAVFRELPEIARQFIIRILFVDQPVPQAVVTSWGAQRCAKEQ AEATSCLTALNVWRVTAIPGGLSAWELSPTFKKSVRQVLLGGGKPWPMTN TLDKDSKPRDIAFLDTYAMSRWRCVLHYMVGTGNRNGTDAEAISPDAVRI LLHANLMKRDERDGITITRQGFQFLLLDTRAQVWHFMLQYLDTCEERGIS LPECLSMLFQLSFSTLGRDYSSEGMNSQMLTFLQHLREFGLVFQRKRKEG RFYPTRLALNVTSKEAAATASVAMDEEATQDCGYIVVETNYRVYAYTDSP LQVAVLGLFTELLYRFPNLVVGVLTRDSVRQALRGGITAEQIVSYLEQYA HPNMRMVESAIHSKSCLPPTVVDQIKLWELERNRFTYTEGVLYNQFLSHT DFVTLRDYAQSIHMLVWQNERTRTMVVQKNGHDDVKRYWKKYSKSGV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mrn-PA | 499 | CG7764-PA | 3..499 | 1..497 | 2602 | 100 | Plus |