BDGP Sequence Production Resources |
Search the DGRC for LD30634
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 306 |
Well: | 34 |
Vector: | pOT2 |
Associated Gene/Transcript | VhaM8.9-RA |
Protein status: | LD30634.pep: gold |
Preliminary Size: | 1705 |
Sequenced Size: | 1461 |
Gene | Date | Evidence |
---|---|---|
CG8444 | 2001-01-01 | Release 2 assignment |
CG8444 | 2001-07-04 | Blastp of sequenced clone |
CG8444 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8444 | 2008-04-29 | Release 5.5 accounting |
CG8444 | 2008-08-15 | Release 5.9 accounting |
CG8444 | 2008-12-18 | 5.12 accounting |
1461 bp (1461 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051790
> LD30634.complete TTTTCTTTGCAGTCGTTCGTCATATGATTAAAAGTCCAGCGGAAAACTGA AAATGTTGAGAGTTTTCGTGATTTTCTCGCTGTTTATAGCGGCCATCAAT GCCTCTGGCGAATTCACCGTGCTGAACCGTCCCAAGGCAATCAGTTTCAA GGGCAACGATGCACTGGAAAGCCACTACGTGGGTGATGTACTCTACGCTT CCATGGGCAACGCCGTCAGCGGCGATACCAACTGGAACGGACTGACCATC AACGATCCCTTCAACCTGGCCAAGGGCGTCATTCTGGTGCATGTCCAGGG CATTGGTCACGTGACCACCGCCGGCAACGTCAAGACCTACGAGCTGACAG GCTCCGGAACGGACGCCTCTCTGAACGCCCTGGCCGCCGAACTGGAGGCA GCCAACGAGCCCGTCTGCGATATTAACTTTGAGCAGTTCGACGATGGCGT TCAAGCCTGGAAGTCCTGCTTTGGTGATTTCGAGGCCCCAGCCGCCAAGC CCACCAAGCACCTGAACCCCTCTCTGCACACCGCTGACAAGCAGTTCCTC CAGGAGGTTGGATTCATCAACAGTGCCGCCGATCATCTGGCTGAGATGGC CAAGCCCTCGAATGTCCTGATGCTGCGCGTTTCCGTCGATGGAGTGGCCA AGGCTCATGGCGAGAAGTCCGTGGCCGTGGAGGAGGCCAACAAATTGCTG TCGGCCGCTATCAGCCGCCTGCTTGCTGCCTCCCAGAAGTCCAGCGACTC GGTTCTGTTTGTCCAGACCACGGAGAAGGACGTGGCAGCATCGCGTGCCA AGCGTGATACCATTGCCGCTTCCACCACCAATCCCTACAACCTGGCCGTC TACTACGGCAGCGACTACCCGGTGATCTTCAACATCATCCTGTGGTTCAT GGTCGTCTTCGGACTGTCTCTGCTGGCTATCTGCTACGCCATCGCTGCCA TGGATCCCGGCAGGGACTCCATCATTTACCGCATGACCTCTACCCGCATC AAGAAGGACAACTAAGGAGGAGCAGGAGGAGTTGAGAAGCGAGAGGAGCA GGAGGAGCGAGAGGAGCTTGCGTTACGCTTTGTTATTTCGTCCCCCTTTT AAGTTGAAATTTGCCAACTTCTACTTCAATCCAACAGCGGATAAATTGTG TGTTTGTGTGTGTGCGGACAGCTGTCGCAGTAGTTGGTTTTATTATCTAT AAATAAGTATTAAAAAACTTTTCAGTTTTCAATGCAGTTGCGGGCGTCGC AACAATTCCATAGAAATTTGTTACATTTTCCTGTTTTGTTGTACTTTTTA GGTTTATATATATATACGAATATGCACAACATACTCGCCAAGTCAGTCAG TTCTTCAAACGATTCATCATATGTAAATTATCAAAATGTGAAGTGTTGAA AAGTAAAGTTAAATATATATAGCCTAAAAAGCCAAAAAAAAAAAAAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8444-RA | 1606 | CG8444-RA | 69..1504 | 1..1436 | 7165 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 5087383..5088365 | 449..1431 | 4885 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 5086768..5087122 | 96..450 | 1775 | 100 | Plus |
chr3R | 27901430 | chr3R | 5086450..5086544 | 1..95 | 475 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
accord | 7404 | accord ACCORD 7404bp | 6091..6130 | 1305..1266 | 119 | 77.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 5086450..5086544 | 1..95 | 100 | -> | Plus |
chr3R | 5086768..5087120 | 96..448 | 100 | -> | Plus |
chr3R | 5087383..5087948 | 449..1014 | 99 | == | Plus |
chr3R | 5088001..5088367 | 1067..1433 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8444-RA | 1..963 | 53..1015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaM8.9-RA | 1..963 | 53..1015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaM8.9-RA | 1..963 | 53..1015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8444-RA | 1..963 | 53..1015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaM8.9-RA | 1..963 | 53..1015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8444-RA | 33..1465 | 1..1433 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaM8.9-RA | 33..1465 | 1..1433 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaM8.9-RA | 36..1468 | 1..1433 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8444-RA | 33..1465 | 1..1433 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaM8.9-RA | 36..1468 | 1..1433 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9260673..9260767 | 1..95 | 100 | -> | Plus |
3R | 9260991..9261343 | 96..448 | 100 | -> | Plus |
3R | 9261606..9262590 | 449..1433 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9260673..9260767 | 1..95 | 100 | -> | Plus |
3R | 9260991..9261343 | 96..448 | 100 | -> | Plus |
3R | 9261606..9262590 | 449..1433 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9260673..9260767 | 1..95 | 100 | -> | Plus |
3R | 9260991..9261343 | 96..448 | 100 | -> | Plus |
3R | 9261606..9262590 | 449..1433 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 5086395..5086489 | 1..95 | 100 | -> | Plus |
arm_3R | 5086713..5087065 | 96..448 | 100 | -> | Plus |
arm_3R | 5087328..5088312 | 449..1433 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9001504..9001598 | 1..95 | 100 | -> | Plus |
3R | 9001822..9002174 | 96..448 | 100 | -> | Plus |
3R | 9002437..9003421 | 449..1433 | 99 | Plus |
Translation from 52 to 1014
> LD30634.pep MLRVFVIFSLFIAAINASGEFTVLNRPKAISFKGNDALESHYVGDVLYAS MGNAVSGDTNWNGLTINDPFNLAKGVILVHVQGIGHVTTAGNVKTYELTG SGTDASLNALAAELEAANEPVCDINFEQFDDGVQAWKSCFGDFEAPAAKP TKHLNPSLHTADKQFLQEVGFINSAADHLAEMAKPSNVLMLRVSVDGVAK AHGEKSVAVEEANKLLSAAISRLLAASQKSSDSVLFVQTTEKDVAASRAK RDTIAASTTNPYNLAVYYGSDYPVIFNIILWFMVVFGLSLLAICYAIAAM DPGRDSIIYRMTSTRIKKDN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16587-PA | 320 | GF16587-PA | 1..320 | 1..320 | 1489 | 85.6 | Plus |
Dana\GF16072-PA | 300 | GF16072-PA | 197..281 | 6..90 | 336 | 70.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15974-PA | 320 | GG15974-PA | 1..320 | 1..320 | 1563 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14333-PA | 320 | GH14333-PA | 1..320 | 1..320 | 1236 | 76.9 | Plus |
Dgri\GH20389-PA | 314 | GH20389-PA | 1..306 | 1..315 | 681 | 43.4 | Plus |
Dgri\GH17987-PA | 140 | GH17987-PA | 1..133 | 1..133 | 452 | 72.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ATP6AP2-PA | 320 | CG8444-PA | 1..320 | 1..320 | 1622 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10428-PA | 319 | GI10428-PA | 1..319 | 1..320 | 1258 | 76.6 | Plus |
Dmoj\GI20060-PA | 309 | GI20060-PA | 3..305 | 13..320 | 586 | 37.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13947-PA | 320 | GL13947-PA | 1..320 | 1..320 | 1356 | 78.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21083-PA | 320 | GA21083-PA | 1..320 | 1..320 | 1356 | 78.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23791-PA | 320 | GM23791-PA | 1..320 | 1..320 | 1694 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18602-PA | 320 | GD18602-PA | 1..320 | 1..320 | 1688 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10644-PA | 319 | GJ10644-PA | 1..319 | 1..320 | 1312 | 80 | Plus |
Dvir\GJ14951-PA | 323 | GJ14951-PA | 1..310 | 1..315 | 641 | 44.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14261-PA | 322 | GK14261-PA | 1..322 | 1..320 | 1284 | 78 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25938-PA | 320 | GE25938-PA | 1..320 | 1..320 | 1673 | 98.1 | Plus |
Translation from 52 to 1014
> LD30634.hyp MLRVFVIFSLFIAAINASGEFTVLNRPKAISFKGNDALESHYVGDVLYAS MGNAVSGDTNWNGLTINDPFNLAKGVILVHVQGIGHVTTAGNVKTYELTG SGTDASLNALAAELEAANEPVCDINFEQFDDGVQAWKSCFGDFEAPAAKP TKHLNPSLHTADKQFLQEVGFINSAADHLAEMAKPSNVLMLRVSVDGVAK AHGEKSVAVEEANKLLSAAISRLLAASQKSSDSVLFVQTTEKDVAASRAK RDTIAASTTNPYNLAVYYGSDYPVIFNIILWFMVVFGLSLLAICYAIAAM DPGRDSIIYRMTSTRIKKDN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
VhaM8.9-PA | 320 | CG8444-PA | 1..320 | 1..320 | 1622 | 100 | Plus |