BDGP Sequence Production Resources |
Search the DGRC for LD30683
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 306 |
Well: | 83 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4968-RA |
Protein status: | LD30683.pep: gold |
Preliminary Size: | 1185 |
Sequenced Size: | 1032 |
Gene | Date | Evidence |
---|---|---|
CG4968 | 2001-01-01 | Release 2 assignment |
CG4968 | 2001-10-10 | Blastp of sequenced clone |
CG4968 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4968 | 2008-04-29 | Release 5.5 accounting |
CG4968 | 2008-08-15 | Release 5.9 accounting |
CG4968 | 2008-12-18 | 5.12 accounting |
1032 bp (1032 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061382
> LD30683.complete TCTAGACCTGTGTGTGTGACATTTGATGCGCCTACACATACATATGATGA ACAGGAATTCTTTTTAGTTCATCAAATGAATACAAAGTAAAGTAAATTGA AAGGAAGCGCCGATCGCAGTTGTTCAGTATTCAGAGAAACATGGAGCCGT TTACCCATAATGATGGCAATCGCGACGAACTAATAATTCAGCAGAAACGG GATATTGAAAAAGAGATCAGCGACACAACTCCCTTGGTCAGCGAGCAGTT GCCACTCACCTGCTTGTATGCGGAATACAGTGGCGACGAGATCTTCACCG CCAAGATCCAGGATCTGTCCAAAAAGTACAAGTTCATTCGCCGCACCCGC CCCGATGGCAATTGTTTCTTCCGAGCCTTCGCCTACTCCTACTTGGAGTA CTTGATCTCAAACACCAGTGCCTACCAGGAGTTCAAAAAACTGGCCGAGG AGTCCAAGGAGAAGCTCGTTCAGCTGGGATTTCCTAGTTTTACATTGGAG GACTTTCACGAAACGTTCATGGAAGTCATCCAGCGCGTTAGCCCCGACAA TGCAGGAGGACACAGCACGGTCCAAGATGAGTTGCACAAGATCTTCAATG AGCAGGGTTACTCAGACTACGTGGTGGTTTACCTACGTTTGATCACCTCG GGAAAACTGCAGGAGGAGGCCGATTTTTACCAAAATTTCATCGAAGGCGA CCTCACCATTGAGGCGTTCCGCCATCTGGAAGTGGAGCCGATGTACAAGG AATCGGATCACATCCACATAATCGCTCTATGCACCGCCCTCGGCGCTGGA GTTCGTGTCGAGTACTTGGACCGTGGCGAAGGTGGGACTGTGAAGGCCCA CGATTTCCCCGAGGGAAGCGAGCCCCGAATTTACCTGATATATCGACCAG GCCACTACGATATACTGTATCCAAATTGAATTGCTCTCAGTAGTTTCTAG ATTACGAAACGATTTATGTATATAAGATGTATAATAAACTACCATTTATT TGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 10306412..10306900 | 515..1003 | 2445 | 100 | Plus |
chr2L | 23010047 | chr2L | 10306047..10306348 | 214..515 | 1510 | 100 | Plus |
chr2L | 23010047 | chr2L | 10305760..10305974 | 1..215 | 1075 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10307557..10308046 | 515..1004 | 2450 | 100 | Plus |
2L | 23513712 | 2L | 10307192..10307493 | 214..515 | 1510 | 100 | Plus |
2L | 23513712 | 2L | 10306905..10307119 | 1..215 | 1075 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10307557..10308046 | 515..1004 | 2450 | 100 | Plus |
2L | 23513712 | 2L | 10307192..10307493 | 214..515 | 1510 | 100 | Plus |
2L | 23513712 | 2L | 10306905..10307119 | 1..215 | 1075 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 10305760..10305974 | 1..215 | 100 | -> | Plus |
chr2L | 10306049..10306348 | 216..515 | 100 | -> | Plus |
chr2L | 10306413..10306900 | 516..1003 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4968-RA | 1..789 | 141..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4968-RA | 1..789 | 141..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4968-RA | 1..789 | 141..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4968-RA | 1..789 | 141..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4968-RA | 1..789 | 141..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4968-RA | 3..1005 | 1..1003 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4968-RA | 3..1005 | 1..1003 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4968-RA | 1..986 | 18..1003 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4968-RA | 3..1005 | 1..1003 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4968-RA | 1..986 | 18..1003 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10306905..10307119 | 1..215 | 100 | -> | Plus |
2L | 10307194..10307493 | 216..515 | 100 | -> | Plus |
2L | 10307558..10308045 | 516..1003 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10306905..10307119 | 1..215 | 100 | -> | Plus |
2L | 10307194..10307493 | 216..515 | 100 | -> | Plus |
2L | 10307558..10308045 | 516..1003 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10306905..10307119 | 1..215 | 100 | -> | Plus |
2L | 10307194..10307493 | 216..515 | 100 | -> | Plus |
2L | 10307558..10308045 | 516..1003 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 10306905..10307119 | 1..215 | 100 | -> | Plus |
arm_2L | 10307194..10307493 | 216..515 | 100 | -> | Plus |
arm_2L | 10307558..10308045 | 516..1003 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10306905..10307119 | 1..215 | 100 | -> | Plus |
2L | 10307194..10307493 | 216..515 | 100 | -> | Plus |
2L | 10307558..10308045 | 516..1003 | 100 | Plus |
Translation from 140 to 928
> LD30683.pep MEPFTHNDGNRDELIIQQKRDIEKEISDTTPLVSEQLPLTCLYAEYSGDE IFTAKIQDLSKKYKFIRRTRPDGNCFFRAFAYSYLEYLISNTSAYQEFKK LAEESKEKLVQLGFPSFTLEDFHETFMEVIQRVSPDNAGGHSTVQDELHK IFNEQGYSDYVVVYLRLITSGKLQEEADFYQNFIEGDLTIEAFRHLEVEP MYKESDHIHIIALCTALGAGVRVEYLDRGEGGTVKAHDFPEGSEPRIYLI YRPGHYDILYPN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15763-PA | 262 | GF15763-PA | 1..262 | 1..262 | 1295 | 92 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10104-PA | 262 | GG10104-PA | 1..262 | 1..262 | 1362 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13358-PA | 262 | GH13358-PA | 1..262 | 1..262 | 1173 | 82.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4968-PA | 262 | CG4968-PA | 1..262 | 1..262 | 1380 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18262-PA | 262 | GI18262-PA | 1..262 | 1..262 | 1153 | 81.3 | Plus |
Dmoj\GI11692-PA | 264 | GI11692-PA | 12..264 | 10..262 | 1098 | 77.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25388-PA | 262 | GL25388-PA | 1..262 | 1..262 | 1225 | 85.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18560-PA | 262 | GA18560-PA | 1..262 | 1..262 | 1227 | 85.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18126-PA | 268 | GM18126-PA | 12..268 | 6..262 | 1360 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23674-PA | 262 | GD23674-PA | 1..262 | 1..262 | 1386 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21950-PA | 262 | GJ21950-PA | 1..262 | 1..262 | 1167 | 83.2 | Plus |
Dvir\GJ11369-PA | 262 | GJ11369-PA | 1..261 | 1..261 | 1143 | 79.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23559-PA | 263 | GK23559-PA | 1..262 | 1..261 | 1150 | 79.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18919-PA | 262 | GE18919-PA | 1..262 | 1..262 | 1364 | 98.1 | Plus |
Translation from 140 to 928
> LD30683.hyp MEPFTHNDGNRDELIIQQKRDIEKEISDTTPLVSEQLPLTCLYAEYSGDE IFTAKIQDLSKKYKFIRRTRPDGNCFFRAFAYSYLEYLISNTSAYQEFKK LAEESKEKLVQLGFPSFTLEDFHETFMEVIQRVSPDNAGGHSTVQDELHK IFNEQGYSDYVVVYLRLITSGKLQEEADFYQNFIEGDLTIEAFRHLEVEP MYKESDHIHIIALCTALGAGVRVEYLDRGEGGTVKAHDFPEGSEPRIYLI YRPGHYDILYPN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4968-PA | 262 | CG4968-PA | 1..262 | 1..262 | 1380 | 100 | Plus |