BDGP Sequence Production Resources |
Search the DGRC for LD30822
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 308 |
Well: | 22 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6293-RA |
Protein status: | LD30822.pep: gold |
Preliminary Size: | 2393 |
Sequenced Size: | 2196 |
Gene | Date | Evidence |
---|---|---|
CG6293 | 2001-01-01 | Release 2 assignment |
CG6293 | 2001-11-09 | Blastp of sequenced clone |
CG6293 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6293 | 2008-04-29 | Release 5.5 accounting |
CG6293 | 2008-08-15 | Release 5.9 accounting |
CG6293 | 2008-12-18 | 5.12 accounting |
2196 bp (2196 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069570
> LD30822.complete CTTTGTCGCGCTCGGACGTACAGCGGAATTCTTCGGGAGTCTTTTCCCGT GCGTTAGCCCAATTAGTTTATGGCGGATATAAAGTGTGAGCTCGCCTGAT CATGGAGCTGAACAATGTTACCATCGAGGACGCCACAGATGCTTCCAAGT CCTACTCTCAAGCAGCTAACACGCCTCCAAGTAATGAGAAACCCAAGCCG CAACTGCTCTACGCCATCAACGATAATCCCCCATGGTACTTGAGCATCTT CCTCGCATTCCAGCACTACCTGACCATGATTGGAGCCATTGTTTCCATAC CTTTCATCCTGACGCCGGCGTTGTGCATGTCCGATGAGGACGCCAACCGG GGCATCATCATCTCTACGATGATCTTCGTCACGGGCATCGTTACCTACTT CCAGGCCACGTGGGGCGTCCGTTTGCCCATTGTTCAGGGCGGAACTATAT CGTTCTTGGTGCCCACCCTTGCCATCTTGGCCCTGCCGCAGTGGAAGTGC CCGGAGCAAGCCGTAATGGATGCCATGGACGAGGCTGAGCGGGAGGAACT ATGGCAAGTGCGTATGCGGGAGCTATCCGGCGCTATTGCCGTGTCCGCCA TGGTGCAAGTTATCCTGGGCTACACTGGTCTGGTGGGAAAAATCCTTAAG TACGTAACTCCATTGACCATTGTACCCACTGTGTCCCTGGTGGGTCTTAC CCTATTCGAGCACGCAGCTGAAACCGCATCCAAGCATTGGGGCATTGCTG TGGGAACCACTGGAATGCTGACACTCTTTTCGCAAATAATGTCGAATGTT CCCGTGCCTATCTTGGCCTACCGCAAGGGTCACGGCTTGGAAATTCGCCA GTTCCAGTTGTTCCGCCTCTTTCCCGTCCTGCTGACCATCATGATAATGT GGGGTCTGTGCGGAATTCTGACTGCTACGGATGTCTTTCCTCCGTCACAT CCTTCTCGCACCGATGTTCGCCTGAATGTGCTGACCAGTGCAAAGTGGTT CTATGTCCCGTATCCGGGACAGTTTGGCTGGCCATCGGTGACGCTGTCCG GCGTGCTTGGCATGTTGGCCGGAGTACTTGCCTGTACGGTGGAGTCACTT AGTTACTATCCAACGGTGTCACAGATGTCCGGCGCCCACTCGCCTCCGCT CCATGCGATCAATCGCGGGATCGGTACCGAGGGCTTTGGCACTGTCCTCG CCGGTCTGTGGGGAGCTGGAAATGGAACCAATACCTTTGGAGAGAATGTT GGCGCCATCGGGGTCACCAAGATTGGATCCCGACGTGTAATACAGTGGGC TGCCTTGATAATGGTCCTCCAGGGGGTAATTGGAAAGTTTGGAGCCATTT TCATTCTCATTCCCGACTCGGTGGTGGGCGGAATCTTTTGTGTGATGTTT GGCATGATTATAGCTTTTGGGCTATCCACCTTGCAGTATGTGGATCTGCG ATCCGCAAGGAATCTTTACATATTGGGGCTCTCAATATTTTTCCCGATGG TATTGTGCCGCTGGATGCAGAAGAACCCTGGAGCTATTGACACCGGAAAC AAGACCGTGGACTCAACGTTATCGGTGCTACTGGGCACTACAATTCTCGT GGGTGGAGTTTTGGGATGCTTGCTGGACAATATAATCCCAGGGACGCCGG AGGAGAGGGGCCTAATCGACTGGGCAAACGAGATGCCCCTGGGCGATGAT AATGTTAATGATGGCACAGCCACCGACTACGATTTTCCACTTGGCATGGA TGCCATTCGTCGTTGGAAGTGGACCTACTATATTCCGTTCATGCCGACTT ACAAGCTCCAGAAGCAAAGCTGATCGTGGGAAAAAATGCAAATAAGAGCC ATTCAATTGGTGACTTGGTTTTTATTTATTTTTAGAAAACACTTTTCGTG CTCACGCTCTAATTACAATTTGAACTTCGAATTCGAATGCTACCCAAAAC TCTAGATCTATTATTTTTTGTTCCGTGTTTCTGTTAATTTGCTTTTTAAA TTCGCTTATTGTTTGTTGCTACGATTACCTAACACTCTTCCGTTTCGCTA CCAACTCGCATATTTTCTATTATTTTGCAATAACATCAATAGACCTAGCA AACGAAAGTTGTCGTTATTAAACTCTAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 6134010..6134866 | 2126..1270 | 4270 | 99.9 | Minus |
chr3R | 27901430 | chr3R | 6135646..6136265 | 754..135 | 3100 | 100 | Minus |
chr3R | 27901430 | chr3R | 6134929..6135446 | 1271..754 | 2575 | 99.8 | Minus |
chr3R | 27901430 | chr3R | 6137209..6137342 | 134..1 | 655 | 99.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 10308262..10309119 | 2127..1270 | 4290 | 100 | Minus |
3R | 32079331 | 3R | 10309899..10310518 | 754..135 | 3100 | 100 | Minus |
3R | 32079331 | 3R | 10309182..10309699 | 1271..754 | 2590 | 100 | Minus |
3R | 32079331 | 3R | 10311462..10311595 | 134..1 | 670 | 100 | Minus |
2R | 25286936 | 2R | 20600274..20600327 | 2180..2127 | 270 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 10049093..10049950 | 2127..1270 | 4290 | 100 | Minus |
3R | 31820162 | 3R | 10050730..10051349 | 754..135 | 3100 | 100 | Minus |
3R | 31820162 | 3R | 10050013..10050530 | 1271..754 | 2590 | 100 | Minus |
3R | 31820162 | 3R | 10052293..10052426 | 134..1 | 670 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 6134010..6134864 | 1272..2126 | 99 | <- | Minus |
chr3R | 6134929..6135445 | 755..1271 | 99 | <- | Minus |
chr3R | 6135646..6136265 | 135..754 | 100 | <- | Minus |
chr3R | 6137209..6137342 | 1..134 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6293-RA | 1..1722 | 102..1823 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6293-RA | 1..1722 | 102..1823 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6293-RA | 1..1722 | 102..1823 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6293-RA | 1..1722 | 102..1823 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6293-RA | 1..1722 | 102..1823 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6293-RA | 1..2126 | 1..2126 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6293-RA | 1..2126 | 1..2126 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6293-RA | 19..2144 | 1..2126 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6293-RA | 1..2126 | 1..2126 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6293-RA | 19..2144 | 1..2126 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10308263..10309117 | 1272..2126 | 100 | <- | Minus |
3R | 10309182..10309698 | 755..1271 | 100 | <- | Minus |
3R | 10309899..10310518 | 135..754 | 100 | <- | Minus |
3R | 10311462..10311595 | 1..134 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10308263..10309117 | 1272..2126 | 100 | <- | Minus |
3R | 10309182..10309698 | 755..1271 | 100 | <- | Minus |
3R | 10309899..10310518 | 135..754 | 100 | <- | Minus |
3R | 10311462..10311595 | 1..134 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10308263..10309117 | 1272..2126 | 100 | <- | Minus |
3R | 10309182..10309698 | 755..1271 | 100 | <- | Minus |
3R | 10309899..10310518 | 135..754 | 100 | <- | Minus |
3R | 10311462..10311595 | 1..134 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 6137184..6137317 | 1..134 | 100 | Minus | |
arm_3R | 6133985..6134839 | 1272..2126 | 100 | <- | Minus |
arm_3R | 6134904..6135420 | 755..1271 | 100 | <- | Minus |
arm_3R | 6135621..6136240 | 135..754 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10049094..10049948 | 1272..2126 | 100 | <- | Minus |
3R | 10050013..10050529 | 755..1271 | 100 | <- | Minus |
3R | 10050730..10051349 | 135..754 | 100 | <- | Minus |
3R | 10052293..10052426 | 1..134 | 100 | Minus |
Translation from 101 to 1822
> LD30822.pep MELNNVTIEDATDASKSYSQAANTPPSNEKPKPQLLYAINDNPPWYLSIF LAFQHYLTMIGAIVSIPFILTPALCMSDEDANRGIIISTMIFVTGIVTYF QATWGVRLPIVQGGTISFLVPTLAILALPQWKCPEQAVMDAMDEAEREEL WQVRMRELSGAIAVSAMVQVILGYTGLVGKILKYVTPLTIVPTVSLVGLT LFEHAAETASKHWGIAVGTTGMLTLFSQIMSNVPVPILAYRKGHGLEIRQ FQLFRLFPVLLTIMIMWGLCGILTATDVFPPSHPSRTDVRLNVLTSAKWF YVPYPGQFGWPSVTLSGVLGMLAGVLACTVESLSYYPTVSQMSGAHSPPL HAINRGIGTEGFGTVLAGLWGAGNGTNTFGENVGAIGVTKIGSRRVIQWA ALIMVLQGVIGKFGAIFILIPDSVVGGIFCVMFGMIIAFGLSTLQYVDLR SARNLYILGLSIFFPMVLCRWMQKNPGAIDTGNKTVDSTLSVLLGTTILV GGVLGCLLDNIIPGTPEERGLIDWANEMPLGDDNVNDGTATDYDFPLGMD AIRRWKWTYYIPFMPTYKLQKQS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17530-PA | 567 | GF17530-PA | 1..567 | 1..573 | 2826 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17290-PA | 573 | GG17290-PA | 1..573 | 1..573 | 2990 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18455-PA | 588 | GH18455-PA | 1..588 | 1..573 | 2689 | 87.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6293-PB | 573 | CG6293-PB | 1..573 | 1..573 | 2994 | 100 | Plus |
CG6293-PA | 573 | CG6293-PA | 1..573 | 1..573 | 2994 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24032-PA | 587 | GI24032-PA | 1..587 | 1..573 | 2709 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23836-PA | 588 | GL23836-PA | 1..588 | 1..573 | 2777 | 90 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19493-PB | 574 | GA19493-PB | 1..574 | 1..573 | 2820 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26175-PA | 573 | GM26175-PA | 1..573 | 1..573 | 2990 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20724-PA | 573 | GD20724-PA | 1..573 | 1..573 | 3001 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23662-PA | 582 | GJ23662-PA | 1..582 | 1..573 | 2649 | 88.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14417-PA | 585 | GK14417-PA | 1..585 | 1..573 | 2700 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24691-PA | 573 | GE24691-PA | 1..573 | 1..573 | 2982 | 98.3 | Plus |
Translation from 101 to 1822
> LD30822.hyp MELNNVTIEDATDASKSYSQAANTPPSNEKPKPQLLYAINDNPPWYLSIF LAFQHYLTMIGAIVSIPFILTPALCMSDEDANRGIIISTMIFVTGIVTYF QATWGVRLPIVQGGTISFLVPTLAILALPQWKCPEQAVMDAMDEAEREEL WQVRMRELSGAIAVSAMVQVILGYTGLVGKILKYVTPLTIVPTVSLVGLT LFEHAAETASKHWGIAVGTTGMLTLFSQIMSNVPVPILAYRKGHGLEIRQ FQLFRLFPVLLTIMIMWGLCGILTATDVFPPSHPSRTDVRLNVLTSAKWF YVPYPGQFGWPSVTLSGVLGMLAGVLACTVESLSYYPTVSQMSGAHSPPL HAINRGIGTEGFGTVLAGLWGAGNGTNTFGENVGAIGVTKIGSRRVIQWA ALIMVLQGVIGKFGAIFILIPDSVVGGIFCVMFGMIIAFGLSTLQYVDLR SARNLYILGLSIFFPMVLCRWMQKNPGAIDTGNKTVDSTLSVLLGTTILV GGVLGCLLDNIIPGTPEERGLIDWANEMPLGDDNVNDGTATDYDFPLGMD AIRRWKWTYYIPFMPTYKLQKQS*