Clone LD30939 Report

Search the DGRC for LD30939

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:309
Well:39
Vector:pOT2
Associated Gene/Transcriptmon2-RB
Protein status:LD30939.pep: gold
Sequenced Size:5442

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG31756 2003-01-01 Sim4 clustering to Release 3
CG8683 2008-04-29 Release 5.5 accounting
CG8683 2008-04-29 Picked prior to 5.5
CG8683 2008-08-15 Release 5.9 accounting
CG8683 2008-12-18 5.12 accounting

Clone Sequence Records

LD30939.complete Sequence

5442 bp assembled on 2007-10-17

GenBank Submission: BT031133

> LD30939.complete
CTGCATTATTATTGCATTTTCTCGAGTCCAAAGTGGTTGCGTAGCATATG
CGTGTATCGGTCGCAGTACTTAAATGTCGCACGCATCCGGTGCAGTGAGT
GTCAAGTGACCAGGAGCGAGTACAACCAGTGACCATGTCGTTTGTGGGCG
GGGGCGGGTGCGGTGGCCAGGACGTGCACAAGTTTGTGGAGGCCCTGCAG
GCGGATTTCAAGACCCTCTCGCTGGAGACCAAGAAGAAGTATCCTCAGAT
CAAGGAGGCGTGCGAGGAGGCCATTTCCAAGCTCTGCACAGCTGGCAGCA
GCCAGCAAAACTCGGTGTACTACACCGTCAACCAGATACTCTATCCGCTG
GTGCAGGGATGCGAGACCAAGGACCTCAAGATCATCAAGTTTTGCTTAGG
CATGATGCAGCGGCTCATCACCCAGCAGGTGGTGGACCAGAAGGGCGCCC
TATACATCACCAACGCACTGTGGACCCTAATGGAGAACAACATCGAGGAA
GTCAAAGTGCTGCAAACAGTAACTCTTTTGCTGACCACCAATACGGTGGT
GCACGGCGACACATTGGCCAAGGCCTTAGTTCTGTGCTTTCGCCTGCACT
ACGCCAAAAATCCCACAATTGTGAATACGGCCGGTGCCACCATCCGGCAG
CTGGTGTCCCTGGTGTTTGAGCGAGTGTACCTGGAGAAAGACTCGGTTTC
CAGCCTCCAGCAGCAACAGTCCAGTGGTTCGCCAGCTGAGGGAGAGGGCG
GAAATCAGGATGTGCAGACCTTTGCTTCGGATGCATTCCTGCTATTTCAG
GATCTTGTGCAGTTGGTAAACGCGGATCAGCCCTACTGGCTGTTGGGCAT
GACCGAAATGACGCGCACCTTTGGTCTGGAGTTACTTGAGGCCGTGCTGA
CCAACTTCAGTGCCGTGTTTCACGAGAGTAACGACTTTCGACTGCTACTT
AAGGAACGAGTCTGTGCCTTGGTCATAAAGCTCTTCTCGCCAAACGTCAA
GCATCGCCAGCTGCCTGCACCAAGCAATGGAAACGCTCCTGTGCCGGCCG
AGAAACCCTATTTCCCAATTAGCATGCGTTTGCTGCGCCTCGTGGCTATA
CTTATACAAAAATACCACACTATACTGGTAACAGAGTGTGAGATCTTTCT
GTCGCTGATTATCAAGTTCTTGGATCCGGATAAGCCAGCTTGGCAGCGAG
CCCTGGCCCTCGAGGTTATCCATAAGCTGGTGACGCGCTCTTCACTGATT
GCATTCTTCTGCAAGTCGTACGACTTAAAAAATCATGCAACCAATATTGT
GCATGACATGATTGCTGCCATGGGCAGCTACATTCGATATTCCCTGATCA
ATGCATCGGCCATGCTGAATGGCCAGCAGAATGGAGTCGCCAATTCACTG
ACAGCCATGTCGGGAAGCAATCAATGTGGCTTCATGTTTCGAGGTGCTTA
CCTTCCCTTGGTAGCCACATATGCGCCAGGCGTCTCAAAGGCCGTTTACT
TGGAAATGTTGGATAAGATAGATGCATCGAATATTCCCGACAGTTATGGC
ATCTCGGTTGGGCATGCTATTCTACTGGATATGACTCGATCGATTGGAGG
TGTCATTCAGCGAACCCCGGAGCTTCATCCCAGCCACAATACGGCAGTGA
TCACTGAGGAGGAGCACAAGCCACTGTGCCTCCAACTGGTGAATTCCAGC
TGGTCTGCCCTGCTCAGCGCTTTTATTCCGTTGGTTGAGACGTCGATTGA
CGAGGCCACCACGGAGAACATCCTCAAGGCTATGCAAAATTATGCAGCTC
TGTGCGGAATGCTGGAGCAACTGCAGCCCCGAGACGCCTTTATAATGGCC
ATGTGCCGCGCCTCCTTTCCGCCCCACTATGCCATGTCCATATTTGCCAA
TACCACACAGTCGGATGGTGACTTGAGATGTCACACGCGCAGTGGTAGTC
AAGATCTAAGCAGCCAGTTCATCAATAGCTGTAGTGGCGATGCAGGAGAC
TTCCGACCCCAGATCGTAGCGGTGGGTACACCACTGCCATCGGCATCGCT
GCCCCACAGCGTGATGCAAGCGCCCGTGATGCTGACTAACAAGAATCTAC
AGTGTATGCGAGCTATTCTTTTCCTAGCGCACAACAATGGTGGGATTTTG
GGTACCTCCTGGCATATTGTGCTGCAGACGCTGCAGCATCTAGTGTGGAT
CTTGGGGCTGAAACCTTCTACCGGAGGCAGTCTTCAGGCCATGCCAAAGC
CAGCTGTAGAGGCTAATGTGGGAATTCAAACGGCAGTGATGGCTGATCTT
CCGGTCCTGTCACAAATGCTTAGCCAGCTGTTCGAGTCCAGTCAATATCT
GGACGATGTAGCGCTGCATCATTTAATCGATGCATTGTGCAAGCTCTCCC
ACGAGGCCATGGAACTTGCTTATGCCAATCGGGAACCATCGCTTTTTGCG
GTAGCCAAACTGCTAGAGACTGGCCTAGTAAACATGCCCCGCATAAAGGT
ATTGTGGCGACCACTTACAAATCACCTGCTGGAGGTGTGCCAACATCGAC
ATATTCGAATGCGGGAGTGGGGCGTGGAAGCCATTACCTACCTGGTGAAG
TCTGCCCTACAGTTCAAGCACAAAACGCCCCTCAAGGAGAACATGGAACT
ACAAACAATGCTGCTGAGTCCACTCTCTGAGTTGTCTACTGTCCTGCACG
CAGATGTACGTCAGCGACAGCTGGATTGCGTCCTTCAGATCCTAAACACT
GCAGGGGAAATCCTCTCGTTTGGCTGGCCAGCCATTATTGAGATCATTGG
TGCTGTAAACGAGCACCATGGCGAGCCGTTAATTCGCACAGCATTCCAAT
GCCTGCAGTTGGTTATCACAGATTTCCTGACCGTAATGCCATGGCGGTGT
CTGCCGCTGTGCATCAGCACTGCTGCTAAGTTCGGCTCCCAGACCCAGGA
ATTGAACATTTCTTTGACGGCTATCGGTCTCATGTGGAATATTTCAGACT
TCTTTAATCAAAACCAAGACAAGCTAATGTCCACTCAGCTGCAGGATGTG
TCCATTCTGCCCGACTTCCCAGGCACAGTGAAGATGCCGCAGTTCGATAA
GTTGTGGATGTGCTTGTACGCCAAGCTGGGCGAGCTGTGTGTGGATCTGC
GTCCGGCGGTGCGTAAATCGGCCGGCCAGACGCTCTTCTCCACCATCTCC
GCCCACGGCAGCCTGCTTAATCCGCCCACGTGGCAGGCGCTGGTCTGGCA
GGTTCTCTTCCCGCTGCTGGACAACGTGCGTGCTCTGAGCAGCTCGGCCA
GCAACGAGAAGGTGGACGCCAGTGGCAACATTCTTATCCATCACTCGCGC
AACACCGCCCAAAAGCAGTGGGCAGAAACGCAGGTGCTGACTCTATCGGG
CGTCTGCAGGGTGTTCAATACAAAACGGGAGCTGCTTCAGATGCTGGGTG
ATTTTGAGCGAGCCTGGTCACTAATTCTAGAGTTCATCCAGAATGCTGCG
TTGAGCAAAAATGGTGAAGTTTCACTTGCTGCTCTGAAGTCTCTACAGGA
GATCATGTACCACAACACAGCAGAGCGAACAGAGAGGGCATTGAAGGATC
CTCAGACGGCACAGGAGCAGGACGAGGAAATTTGGACTATTGCTTGGAAC
ATTTGGCTTAGCATTGGCATGGAGAGCACCAAAATGTCCACATCGACGTC
AGCGAAGTTGCAGCAGCAAAATAGCAATGGCGCCGAAACTCAGGAGGACT
TTTACATTCCCAGTCAGGCCTTCCTCACCGCCCTGATCCAAATCTTTCCC
GCCATTTTTCAGCACATTCAAGTCAAATTTACTGCCGCAGACTTTGACAA
ATTCTGTACGGTACTGACGAACGCTGTGTGCATTCCCGTCCAGACCGATG
CGGTTCCCTACATCATGTCCACTGTGTCGGACACCCTGCTGACGCCGCTA
CACGATGGCATTCTCGATTGCATGGAACTAATACAGAAGGAGGCGACAAA
ACCCGATTCCCACATCAGCCAGCTTATCCCTGCCATTTTCCGGCAGTTGC
TGATCTTTAGTAAATTCGCTTGCGCACCGCCCACATTTCAGCAGAGTGTG
GAGCACAAGTATGCGAAGTCCTCGGGACACTATGCCAACAATGCCTCCGT
TGAGGTGGTCAGCATGAACTACATACCTTTCGGTGAGAAGTCAATCAGTA
TTTGCGTGAAGCTTTACCAGACCACGGCCACCGAGGATTCGGTTGTGCAG
GAGCAGATTCTGCATGACATCGTCAAGGCTCTGCGCACGCCGCTGGCGAT
GAAGTACAAATGCCTTTCCTCCAGCACATGGAAGCTGGCCATTTCCAGTC
TGATTAGCGTGCTGCATACTGGTCTCAAGGTGGCGCGAGCTAAGCCGCAA
CATTTCGCAAGCTTGTGGGACGATTTGGCCGATACCCTGGACAAGTTCCT
GTTTCCGGCGAGTGTGTGCACCATCGAGGATCGCGGTCTCGAGGAGATCG
TGCTGGATGAAACGATCGATTGTCAGGTTATTGAGCTGCTGAGGGACGAG
GTGTTGCCTCACTCGCACGAAATGCCACACCAGTTTATCATGCAGATCGT
AGTGCTGCTGAACAAGGGATCTATACACTCCGCCTCAGACACGAACATTT
GCTACGAATCCGACTGGAAGCTGCGTGAGATTTTTGCCAAAACGTGTTTC
GAGACCCTTCTGCAGTTCTCGCTGCTAGAGGACCATGCCAACACCAACAA
CAATCGTCTCAACGCCAATGTGTTGACTGCTGGGGCCGCGGGAGCAGGTG
GCAAGGACTTTGCCGGCAGACTAGCAGTCACCGCCCTGTTGCATCGATTC
CAAGAGGTGCTCAAACGGTTTAACGACGATGAGAGACAAAGCGGAAAGTG
TCCGCTTCCAAGGTTCCGGCTATCAGAGATATCGTTTGTGCTAAAAGCCA
TTGCAACACTTGTGGTATCCATGAAAAAAGCGCCAGCATCAAAGGTCAAC
AAGCCGGCTTGGGATCAGTTGATTGGCCTGTATCCATACCTGGTGGACTG
CACCACAACAACGTCGCCGGAAGTGTCAAGATCACTACGAGAAGCACTGC
TCCAGTACACGGACTTGCTGCAGGCGCCACGATCCTGCTCAGCGGCCACC
TCAAACGACAATGTAATACAATCGAATGGACAAGAGTGAAAGTATGCCTA
GACACAGACAGAGACCAAGTCCACATCCAGACTGGTGACAGCTGTGCGAT
GTTTTTCTTAGTTGTTTAAGCGCGAACCGTTTGAATATATATTTATTTTG
TGCATAATTTATGAATGTTAATCTTAGCCCTCCCTCGCATAGATGTAACG
ACTAAGCATCTATGTACTTACATACATACCTAAACATATATATATATATA
TTTATATTTGTAAAAGTAAAAAAAAAAAAAAAAAAAAAAAAA

LD30939.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:34:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG8683-RB 5904 CG8683-RB 138..5555 1..5418 27090 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 13:10:41
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 8116958..8117884 4914..3988 4635 100 Minus
chr2L 23010047 chr2L 8119725..8120441 2646..1930 3585 100 Minus
chr2L 23010047 chr2L 8118542..8119196 3638..2984 3245 99.7 Minus
chr2L 23010047 chr2L 8120993..8121573 1498..918 2875 99.7 Minus
chr2L 23010047 chr2L 8121741..8122279 926..388 2695 100 Minus
chr2L 23010047 chr2L 8120503..8120935 1931..1499 2165 100 Minus
chr2L 23010047 chr2L 8116325..8116747 5417..4995 2115 100 Minus
chr2L 23010047 chr2L 8119277..8119616 2984..2645 1685 99.7 Minus
chr2L 23010047 chr2L 8122723..8122980 258..1 1290 100 Minus
chr2L 23010047 chr2L 8118253..8118440 3826..3639 940 100 Minus
chr2L 23010047 chr2L 8117936..8118103 3990..3823 825 99.4 Minus
chr2L 23010047 chr2L 8122336..8122469 389..256 670 100 Minus
chr2L 23010047 chr2L 8116812..8116896 4995..4911 425 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:24:32 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 13:10:39
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8117925..8118851 4914..3988 4635 100 Minus
2L 23513712 2L 8120693..8121409 2646..1930 3585 100 Minus
2L 23513712 2L 8119504..8120158 3638..2984 3275 100 Minus
2L 23513712 2L 8121961..8122541 1498..918 2875 99.7 Minus
2L 23513712 2L 8122709..8123247 926..388 2695 100 Minus
2L 23513712 2L 8121471..8121903 1931..1499 2165 100 Minus
2L 23513712 2L 8117291..8117714 5418..4995 2120 100 Minus
2L 23513712 2L 8120245..8120584 2984..2645 1700 100 Minus
2L 23513712 2L 8123691..8123948 258..1 1290 100 Minus
2L 23513712 2L 8119220..8119407 3826..3639 940 100 Minus
2L 23513712 2L 8118903..8119070 3990..3823 825 99.4 Minus
2L 23513712 2L 8123304..8123437 389..256 670 100 Minus
2L 23513712 2L 8117779..8117863 4995..4911 425 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:31:36
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8117925..8118851 4914..3988 4635 100 Minus
2L 23513712 2L 8120693..8121409 2646..1930 3585 100 Minus
2L 23513712 2L 8119504..8120158 3638..2984 3275 100 Minus
2L 23513712 2L 8121961..8122541 1498..918 2875 99.6 Minus
2L 23513712 2L 8122709..8123247 926..388 2695 100 Minus
2L 23513712 2L 8121471..8121903 1931..1499 2165 100 Minus
2L 23513712 2L 8117291..8117714 5418..4995 2120 100 Minus
2L 23513712 2L 8120245..8120584 2984..2645 1700 100 Minus
2L 23513712 2L 8123691..8123948 258..1 1290 100 Minus
2L 23513712 2L 8119220..8119407 3826..3639 940 100 Minus
2L 23513712 2L 8118903..8119070 3990..3823 825 99.4 Minus
2L 23513712 2L 8123304..8123437 389..256 670 100 Minus
2L 23513712 2L 8117779..8117863 4995..4911 425 100 Minus
Blast to na_te.dros performed on 2019-03-16 13:10:39 has no hits.

LD30939.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 13:11:37 Download gff for LD30939.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 8117937..8118099 3827..3989 100 <- Minus
chr2L 8116385..8116746 4996..5357 100 <- Minus
chr2L 8116812..8116894 4913..4995 100 <- Minus
chr2L 8116960..8117882 3990..4912 100 <- Minus
chr2L 8118253..8118440 3639..3826 100 <- Minus
chr2L 8118542..8119195 2985..3638 99 <- Minus
chr2L 8119277..8119615 2646..2984 99 <- Minus
chr2L 8119726..8120441 1930..2645 100 <- Minus
chr2L 8120505..8120935 1499..1929 100 <- Minus
chr2L 8120993..8121564 927..1498 100 <- Minus
chr2L 8121741..8122277 390..926 100 <- Minus
chr2L 8122336..8122467 258..389 100 <- Minus
chr2L 8122724..8122980 1..257 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:11:58 Download gff for LD30939.complete
Subject Subject Range Query Range Percent Splice Strand
CG8683-RA 1..787 135..921 100 == Plus
CG8683-RA 788..5028 947..5189 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:04:39 Download gff for LD30939.complete
Subject Subject Range Query Range Percent Splice Strand
CG8683-RB 1..5055 135..5189 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 15:50:56 Download gff for LD30939.complete
Subject Subject Range Query Range Percent Splice Strand
mon2-RB 1..5055 135..5189 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:50:57 Download gff for LD30939.complete
Subject Subject Range Query Range Percent Splice Strand
CG8683-RA 1..787 135..921 100 == Plus
CG8683-RA 788..5028 947..5189 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:10:27 Download gff for LD30939.complete
Subject Subject Range Query Range Percent Splice Strand
mon2-RB 1..5055 135..5189 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 16:56:46 Download gff for LD30939.complete
Subject Subject Range Query Range Percent Splice Strand
CG8683-RA 54..977 1..924 100 == Plus
CG8683-RA 978..5443 952..5417 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:04:39 Download gff for LD30939.complete
Subject Subject Range Query Range Percent Splice Strand
CG8683-RB 54..5470 1..5417 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:50:56 Download gff for LD30939.complete
Subject Subject Range Query Range Percent Splice Strand
mon2-RB 63..5479 1..5417 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:50:58 Download gff for LD30939.complete
Subject Subject Range Query Range Percent Splice Strand
CG8683-RA 54..977 1..924 100 == Plus
CG8683-RA 978..5443 952..5417 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:10:27 Download gff for LD30939.complete
Subject Subject Range Query Range Percent Splice Strand
mon2-RB 63..5479 1..5417 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:11:37 Download gff for LD30939.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8117292..8117713 4996..5417 100 <- Minus
2L 8117779..8117861 4913..4995 100 <- Minus
2L 8121473..8121903 1499..1929 100 <- Minus
2L 8117927..8118849 3990..4912 100 <- Minus
2L 8118904..8119066 3827..3989 100 <- Minus
2L 8119220..8119407 3639..3826 100 <- Minus
2L 8119504..8120157 2985..3638 100 <- Minus
2L 8120245..8120583 2646..2984 100 <- Minus
2L 8120694..8121409 1930..2645 100 <- Minus
2L 8121961..8122532 927..1498 100 <- Minus
2L 8122709..8123245 390..926 100 <- Minus
2L 8123304..8123435 258..389 100 <- Minus
2L 8123692..8123948 1..257 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:11:37 Download gff for LD30939.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8117292..8117713 4996..5417 100 <- Minus
2L 8117779..8117861 4913..4995 100 <- Minus
2L 8121473..8121903 1499..1929 100 <- Minus
2L 8117927..8118849 3990..4912 100 <- Minus
2L 8118904..8119066 3827..3989 100 <- Minus
2L 8119220..8119407 3639..3826 100 <- Minus
2L 8119504..8120157 2985..3638 100 <- Minus
2L 8120245..8120583 2646..2984 100 <- Minus
2L 8120694..8121409 1930..2645 100 <- Minus
2L 8121961..8122532 927..1498 100 <- Minus
2L 8122709..8123245 390..926 100 <- Minus
2L 8123304..8123435 258..389 100 <- Minus
2L 8123692..8123948 1..257 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:11:37 Download gff for LD30939.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8117292..8117713 4996..5417 100 <- Minus
2L 8117779..8117861 4913..4995 100 <- Minus
2L 8121473..8121903 1499..1929 100 <- Minus
2L 8117927..8118849 3990..4912 100 <- Minus
2L 8118904..8119066 3827..3989 100 <- Minus
2L 8119220..8119407 3639..3826 100 <- Minus
2L 8119504..8120157 2985..3638 100 <- Minus
2L 8120245..8120583 2646..2984 100 <- Minus
2L 8120694..8121409 1930..2645 100 <- Minus
2L 8121961..8122532 927..1498 100 <- Minus
2L 8122709..8123245 390..926 100 <- Minus
2L 8123304..8123435 258..389 100 <- Minus
2L 8123692..8123948 1..257 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:50:56 Download gff for LD30939.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8119220..8119407 3639..3826 100 <- Minus
arm_2L 8117292..8117713 4996..5417 100 <- Minus
arm_2L 8117779..8117861 4913..4995 100 <- Minus
arm_2L 8117927..8118849 3990..4912 100 <- Minus
arm_2L 8118904..8119066 3827..3989 100 <- Minus
arm_2L 8119504..8120157 2985..3638 100 <- Minus
arm_2L 8120245..8120583 2646..2984 100 <- Minus
arm_2L 8120694..8121409 1930..2645 100 <- Minus
arm_2L 8121473..8121903 1499..1929 100 <- Minus
arm_2L 8121961..8122532 927..1498 100 <- Minus
arm_2L 8122709..8123245 390..926 100 <- Minus
arm_2L 8123304..8123435 258..389 100 <- Minus
arm_2L 8123692..8123948 1..257 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:56:45 Download gff for LD30939.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8123304..8123435 258..389 100 <- Minus
2L 8123692..8123948 1..257 100   Minus
2L 8117292..8117713 4996..5417 100 <- Minus
2L 8117779..8117861 4913..4995 100 <- Minus
2L 8117927..8118849 3990..4912 100 <- Minus
2L 8118904..8119066 3827..3989 100 <- Minus
2L 8119220..8119407 3639..3826 100 <- Minus
2L 8122709..8123245 390..926 100 <- Minus
2L 8119504..8120157 2985..3638 100 <- Minus
2L 8120245..8120583 2646..2984 100 <- Minus
2L 8120694..8121409 1930..2645 100 <- Minus
2L 8121473..8121903 1499..1929 100 <- Minus
2L 8121961..8122532 927..1498 100 <- Minus

LD30939.pep Sequence

Translation from 134 to 5188

> LD30939.pep
MSFVGGGGCGGQDVHKFVEALQADFKTLSLETKKKYPQIKEACEEAISKL
CTAGSSQQNSVYYTVNQILYPLVQGCETKDLKIIKFCLGMMQRLITQQVV
DQKGALYITNALWTLMENNIEEVKVLQTVTLLLTTNTVVHGDTLAKALVL
CFRLHYAKNPTIVNTAGATIRQLVSLVFERVYLEKDSVSSLQQQQSSGSP
AEGEGGNQDVQTFASDAFLLFQDLVQLVNADQPYWLLGMTEMTRTFGLEL
LEAVLTNFSAVFHESNDFRLLLKERVCALVIKLFSPNVKHRQLPAPSNGN
APVPAEKPYFPISMRLLRLVAILIQKYHTILVTECEIFLSLIIKFLDPDK
PAWQRALALEVIHKLVTRSSLIAFFCKSYDLKNHATNIVHDMIAAMGSYI
RYSLINASAMLNGQQNGVANSLTAMSGSNQCGFMFRGAYLPLVATYAPGV
SKAVYLEMLDKIDASNIPDSYGISVGHAILLDMTRSIGGVIQRTPELHPS
HNTAVITEEEHKPLCLQLVNSSWSALLSAFIPLVETSIDEATTENILKAM
QNYAALCGMLEQLQPRDAFIMAMCRASFPPHYAMSIFANTTQSDGDLRCH
TRSGSQDLSSQFINSCSGDAGDFRPQIVAVGTPLPSASLPHSVMQAPVML
TNKNLQCMRAILFLAHNNGGILGTSWHIVLQTLQHLVWILGLKPSTGGSL
QAMPKPAVEANVGIQTAVMADLPVLSQMLSQLFESSQYLDDVALHHLIDA
LCKLSHEAMELAYANREPSLFAVAKLLETGLVNMPRIKVLWRPLTNHLLE
VCQHRHIRMREWGVEAITYLVKSALQFKHKTPLKENMELQTMLLSPLSEL
STVLHADVRQRQLDCVLQILNTAGEILSFGWPAIIEIIGAVNEHHGEPLI
RTAFQCLQLVITDFLTVMPWRCLPLCISTAAKFGSQTQELNISLTAIGLM
WNISDFFNQNQDKLMSTQLQDVSILPDFPGTVKMPQFDKLWMCLYAKLGE
LCVDLRPAVRKSAGQTLFSTISAHGSLLNPPTWQALVWQVLFPLLDNVRA
LSSSASNEKVDASGNILIHHSRNTAQKQWAETQVLTLSGVCRVFNTKREL
LQMLGDFERAWSLILEFIQNAALSKNGEVSLAALKSLQEIMYHNTAERTE
RALKDPQTAQEQDEEIWTIAWNIWLSIGMESTKMSTSTSAKLQQQNSNGA
ETQEDFYIPSQAFLTALIQIFPAIFQHIQVKFTAADFDKFCTVLTNAVCI
PVQTDAVPYIMSTVSDTLLTPLHDGILDCMELIQKEATKPDSHISQLIPA
IFRQLLIFSKFACAPPTFQQSVEHKYAKSSGHYANNASVEVVSMNYIPFG
EKSISICVKLYQTTATEDSVVQEQILHDIVKALRTPLAMKYKCLSSSTWK
LAISSLISVLHTGLKVARAKPQHFASLWDDLADTLDKFLFPASVCTIEDR
GLEEIVLDETIDCQVIELLRDEVLPHSHEMPHQFIMQIVVLLNKGSIHSA
SDTNICYESDWKLREIFAKTCFETLLQFSLLEDHANTNNNRLNANVLTAG
AAGAGGKDFAGRLAVTALLHRFQEVLKRFNDDERQSGKCPLPRFRLSEIS
FVLKAIATLVVSMKKAPASKVNKPAWDQLIGLYPYLVDCTTTTSPEVSRS
LREALLQYTDLLQAPRSCSAATSNDNVIQSNGQE*

LD30939.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:47:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15133-PA 1692 GF15133-PA 1..1692 1..1684 8482 94.8 Plus
Dana\GF14256-PA 1656 GF14256-PA 910..1303 653..1049 220 22 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:47:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23477-PA 1680 GG23477-PA 1..1680 1..1684 8927 98.6 Plus
Dere\GG23880-PA 1653 GG23880-PA 907..1300 653..1049 217 21.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:47:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10159-PA 1713 GH10159-PA 14..1713 13..1684 7833 88.3 Plus
Dgri\GH11113-PA 1709 GH11113-PA 923..1330 634..1049 221 22.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:43:50
Subject Length Description Subject Range Query Range Score Percent Strand
mon2-PC 1684 CG8683-PC 1..1684 1..1684 8651 100 Plus
mon2-PB 1684 CG8683-PB 1..1684 1..1684 8651 100 Plus
Sec71-PA 1653 CG7578-PA 894..1300 634..1049 204 21.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:47:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22453-PA 1701 GI22453-PA 14..1700 13..1683 7888 89.3 Plus
Dmoj\GI18236-PA 1710 GI18236-PA 931..1338 634..1049 228 23 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:47:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24746-PA 1719 GL24746-PA 1..1719 1..1684 8496 93 Plus
Dper\GL21229-PA 1644 GL21229-PA 897..1290 653..1049 167 20.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:47:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16450-PA 1722 GA16450-PA 1..1722 1..1684 8350 92.6 Plus
Dpse\GA20452-PA 1644 GA20452-PA 897..1290 653..1049 219 22.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:48:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13173-PA 1681 GM13173-PA 1..1681 1..1684 8978 99.2 Plus
Dsec\GM15214-PA 1653 GM15214-PA 907..1300 653..1049 210 21.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:48:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22441-PA 1678 GD22441-PA 1..1678 1..1684 8858 98.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:48:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20346-PA 1699 GJ20346-PA 14..1699 13..1684 7950 89.8 Plus
Dvir\GJ18143-PA 1714 GJ18143-PA 920..1327 634..1049 224 22.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:48:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14801-PA 1724 GK14801-PA 1..1724 1..1684 7996 89.1 Plus
Dwil\GK24228-PA 1672 GK24228-PA 923..1316 653..1049 214 21.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:48:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11191-PA 1684 GE11191-PA 1..1684 1..1684 8986 99.1 Plus
Dyak\GE18681-PA 1653 GE18681-PA 907..1300 653..1049 217 21.3 Plus

LD30939.hyp Sequence

Translation from 134 to 5188

> LD30939.hyp
MSFVGGGGCGGQDVHKFVEALQADFKTLSLETKKKYPQIKEACEEAISKL
CTAGSSQQNSVYYTVNQILYPLVQGCETKDLKIIKFCLGMMQRLITQQVV
DQKGALYITNALWTLMENNIEEVKVLQTVTLLLTTNTVVHGDTLAKALVL
CFRLHYAKNPTIVNTAGATIRQLVSLVFERVYLEKDSVSSLQQQQSSGSP
AEGEGGNQDVQTFASDAFLLFQDLVQLVNADQPYWLLGMTEMTRTFGLEL
LEAVLTNFSAVFHESNDFRLLLKERVCALVIKLFSPNVKHRQLPAPSNGN
APVPAEKPYFPISMRLLRLVAILIQKYHTILVTECEIFLSLIIKFLDPDK
PAWQRALALEVIHKLVTRSSLIAFFCKSYDLKNHATNIVHDMIAAMGSYI
RYSLINASAMLNGQQNGVANSLTAMSGSNQCGFMFRGAYLPLVATYAPGV
SKAVYLEMLDKIDASNIPDSYGISVGHAILLDMTRSIGGVIQRTPELHPS
HNTAVITEEEHKPLCLQLVNSSWSALLSAFIPLVETSIDEATTENILKAM
QNYAALCGMLEQLQPRDAFIMAMCRASFPPHYAMSIFANTTQSDGDLRCH
TRSGSQDLSSQFINSCSGDAGDFRPQIVAVGTPLPSASLPHSVMQAPVML
TNKNLQCMRAILFLAHNNGGILGTSWHIVLQTLQHLVWILGLKPSTGGSL
QAMPKPAVEANVGIQTAVMADLPVLSQMLSQLFESSQYLDDVALHHLIDA
LCKLSHEAMELAYANREPSLFAVAKLLETGLVNMPRIKVLWRPLTNHLLE
VCQHRHIRMREWGVEAITYLVKSALQFKHKTPLKENMELQTMLLSPLSEL
STVLHADVRQRQLDCVLQILNTAGEILSFGWPAIIEIIGAVNEHHGEPLI
RTAFQCLQLVITDFLTVMPWRCLPLCISTAAKFGSQTQELNISLTAIGLM
WNISDFFNQNQDKLMSTQLQDVSILPDFPGTVKMPQFDKLWMCLYAKLGE
LCVDLRPAVRKSAGQTLFSTISAHGSLLNPPTWQALVWQVLFPLLDNVRA
LSSSASNEKVDASGNILIHHSRNTAQKQWAETQVLTLSGVCRVFNTKREL
LQMLGDFERAWSLILEFIQNAALSKNGEVSLAALKSLQEIMYHNTAERTE
RALKDPQTAQEQDEEIWTIAWNIWLSIGMESTKMSTSTSAKLQQQNSNGA
ETQEDFYIPSQAFLTALIQIFPAIFQHIQVKFTAADFDKFCTVLTNAVCI
PVQTDAVPYIMSTVSDTLLTPLHDGILDCMELIQKEATKPDSHISQLIPA
IFRQLLIFSKFACAPPTFQQSVEHKYAKSSGHYANNASVEVVSMNYIPFG
EKSISICVKLYQTTATEDSVVQEQILHDIVKALRTPLAMKYKCLSSSTWK
LAISSLISVLHTGLKVARAKPQHFASLWDDLADTLDKFLFPASVCTIEDR
GLEEIVLDETIDCQVIELLRDEVLPHSHEMPHQFIMQIVVLLNKGSIHSA
SDTNICYESDWKLREIFAKTCFETLLQFSLLEDHANTNNNRLNANVLTAG
AAGAGGKDFAGRLAVTALLHRFQEVLKRFNDDERQSGKCPLPRFRLSEIS
FVLKAIATLVVSMKKAPASKVNKPAWDQLIGLYPYLVDCTTTTSPEVSRS
LREALLQYTDLLQAPRSCSAATSNDNVIQSNGQE*

LD30939.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:46:07
Subject Length Description Subject Range Query Range Score Percent Strand
mon2-PC 1684 CG8683-PC 1..1684 1..1684 8651 100 Plus
mon2-PB 1684 CG8683-PB 1..1684 1..1684 8651 100 Plus
Sec71-PA 1653 CG7578-PA 894..1300 634..1049 204 21.3 Plus