Clone LD30953 Report

Search the DGRC for LD30953

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:309
Well:53
Vector:pOT2
Associated Gene/TranscriptCG3409-RA
Protein status:LD30953.pep: gold
Preliminary Size:4389
Sequenced Size:5074

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3409 2001-01-01 Release 2 assignment
CG3409 2001-11-02 Blastp of sequenced clone
CG3409 2003-01-01 Sim4 clustering to Release 3
CG3409 2008-04-29 Release 5.5 accounting
CG3409 2008-08-15 Release 5.9 accounting
CG3409 2008-12-18 5.12 accounting

Clone Sequence Records

LD30953.complete Sequence

5074 bp (5074 high quality bases) assembled on 2001-11-02

GenBank Submission: AY069571

> LD30953.complete
TGCGAACGGACGTGTGGTGCTAGTGTGGTGGACTATACGACTTTTCTATA
TTTTTAAGGGCCGCGGCAGTAGAGATAGCCTATTTTTCTCGCGACAGAGC
GTGTTAAGTAATCAATTGAAATCCAGCGATTGGGTGAATCGAAAGTTCCT
CCCCGATTCCCGACTCCTGCGTGCATTTGAAGCACTTACAGCCGCGATTT
CCGCACTCGGGTGCACTGTGCTTTTGTTTATACGACCTCCGGTCGCCCCA
CATTTTCTGTTGAACTTGTGCCGCCGAGCGGTGTTGTCACTGTCCCACCT
CCCCCGCAGAAAATCGAAACTCCCGTACAGTGGGCGTGACCCAGGGCGAA
GCCGATAGATAATAACTTTCCACGGGAACTTGAGTGTGCGTAATATCGCC
TATAAAGAGTGTTTGGCAACTTGGCGTTCTGGAGTGTCACCCGCAACCAA
TTCTAATCGTACATACATATATAAGCCAGCTGATTTGGACGTGTGCTACA
GCGATTTCATCCCACTGTGCAAGACGGGCGGCAGAAATTCATAAAACAAC
AGCTAACAAATTCGACGAAGAGGCATACGCAAAAGAAACGAAAGAGAGAG
CGAGCTTATTGTATTTTTGTAATACTCGTCTGCCCAACAACTACATTTAC
TGTAATGTGCAGCCTATAATGTAAGATAATGCAATGACACAGGACCAACT
CCCAGTAATGGTTGCAATTTAGCCCAGAAGCCACGAATTCACCAACTCAG
CAGAGTGATCAGCGTTTGCACTGAAGGCTGCTAATTGAGGACGAGGATCA
TAAATCATTATCTGGCGCCAGCGAGGAGGCGAGCACAGCGACAGCAGCGA
TTGAGTTGCACCACCAGAGACGAATTAATCATACGCCGCGTTGGTCGTCC
CTCCGTCGATACTAAGATATACATATATACAATGCCTGCGAATCCGCCTC
CGCACCACGCGCCGCGCACTTGACACGGGGAGCGGCAGAGTAGCCGGAGA
AGCCAGTGAGGCCCAGTCTTGTGTTCGATTTGTGTTTGTTATTTCTTGTT
CGAGCTAGCCGGGCACGCTAGTTGGCATCGTTGGCATCGAATCGAAAAGT
GTTTGATTTCCGCGAAAACAAAGTACCGCATGTGGCTGCCAGGGCAAAAT
CTGCTAGCCGGCAGCACAAACTGCAACAACTGCATCTGCAACTGCAACAG
CAACAACAGCAACATCACCAGCAACTGCCGCCAGTTGCCGTCAATTATCG
CTCAATATATTCTCCGTTGGCCTGTGATAAACCCCCTAACGTTCTTAATG
AACGACCTTCGGTCCAAGTCATTCTATCGTGCAGGCAAACCAACATCTGC
AGCATCCGCGTCGGGCGCGACCACCAACGCCAAGTCGTTCGACAAGGGCC
AGAACAACAATCCCCGTACTTACAACAACAGCGGCAAGTCGAACAAGGTG
TTCCTGCATTACATACCCCGCGATCCGCGCCTAAGAATTTTCAACAAAAC
CGCCACCCTGAATAAACACTCGAATCGCACCCTGAGCGAGCTAAACATAA
CTGAAGATCTGTGCAATTATGGTGAATTGATTGGCGGTGGTGCCGAAACA
GTGAAACTAGTGCCAGTGAAATCTTAAGAATATATCCGCAAAATCCGCAG
ATCACCGAATCAATTTATTCGTTAACAAAAGTTGGCTGTTGGCGTGCGGA
GAGAGCATTGCCTGGACTACGATCGGCTACGCACTGCAGTTGACCAACAG
AGAGAGGGAATATTTACCTACCGCCTACTTAAGAAAATTTATGCTGAAAT
CTAATGCAAATTGTGTTCACTTCCAATAATCGCTTGGACAAGAAAGTGCA
AATTTTACAAACCTTTTTATAGACGTAGCTGAACCCTTTACACAACAACA
CGATCACTGGGACTCCGACATGGCCAAGCTAGCGACGGATCCAAACGCCT
CCAACAACAACAGCTGCGAGGCGGTTAACAACAACCACAATGGCCAGAAC
CAGAGCCAAAACGGAGGCGCCTCCAATTACCAGGCCCTGCCTCTTACGCC
TGCTCCGGCCAACACGCCACTCCACAAGGCCATCAAGCACGACCTCTTCC
CGGAGGTCACCTTCTGCAACCTCTCCGTAGAGGAGCTCGCAGATGGGGCT
GGACACAGCCGTGTGGTAAGGAGCAGTGTCATCGAACTGGAGGACGGCAC
CATGACGTGCCTGATGAACGGAAATGGGCAGGTGAAGCGTCGCAAACGCC
TGATCTCGAACGAGTCCGGCGACTCGATCGACTCCAGTTCCACGGAGAAG
AAAACGCCCAAGATGCCCGACGGTGGATATGGGTGGGTGGTGGTGTTCGC
CTCTCTGGTCGTGTCCCTTATAGCCGACGGACTGAGCTTCTCATTTGGCC
TAATAAACGTGGAACTGCTGGAATACTTCGGAGAGTCCACTTCGAAGACC
GCCTGGATATCCTCGCTATTCTTCTCCGTGCCCCTGTTGATGGGACCCAT
CTGGTCCAATCTGGTGGACAAGTACGGCTGCCGAAAGATGACCATCCTCG
GCGGAGTGGTCTCTGCCTTTGGGTTTGCTCTGTCTTCGTTTTGCAACTCG
ATCGAGATGCTCATGGTGACCTTTGGTATCATTTCGGGACTGGGCCTAGG
CATCGGGTATGTGACCGCGGTGGTGTCCATTGCATTCTGGTTTGACAAGA
AGCGCACCTTTGCGACCGGCATCGGAGCATCGGGCACCGGCATCGGGACC
TTTGTCTACGCCCGCCTTACTTCCTATCTAATCGAATCGTACGGCTGGCG
CGGAGCCACTCTAATCCTTGGCGGCACCATGCTCAACGCATGCGTTTGCG
GCGCCCTCATGCGCGATCCCGACTGGCTGATCGAGGAAAACCGTCTAGAG
AGTCGATCCCAAAGCGTCACCACCTTCTCGAACTCCAGTGTCTGCCTGGA
GGAAATAAAAAAGCTGCTGGACACCGGCATCACAAAGGAGGCTGTGCTAG
ACTCGTTGGTGACCAAGAACAACACGGAGGCCAACCAGCAGATTGACGAT
CCGTTGGACTCCGCTCTCAAGCGCTACCGCAGCGAGATCTTCCTGCCCAC
CTTCCTGAGCACTCAGGAGCTTGACAGCATCTGCGAGGTTAAGAGCCTGA
GCCGACGCTCCCTACGCCACAAGGAGGGTGAGGAGGCGCCGTCACGAGAG
AACCTGCTGTCCATGTCCTCAGGAGCAGGTGCCTATCCCCCATCGACGGC
CGTTATAGGCTCGCCAGATGATACCCTAATGGGCGGAATAGCTCACGAGG
CGGCAGAGGAAGCAAAGAAGGCCTATCTGGCCTCCATCGAGACGCTGTCT
CCATCGGAAAAGCGCTCCACTGGTAGGACTCCCAATGGCTCGCTCCGCTC
CTCGGACGAAGGCTACCTTACGCAGAAGCACGCCAGCTCCCGGTACTCGC
TTAACGAAAACATCTTCATGGCCAAGCATACAACACCATCAATCTCCAAC
CTAAAGGTGAATGGCCTGCGACACAATTCGGTGGACATCTTGAGCGAGGA
CATGCACTGCTACTACTCGAAGGACGAGACCTTCGCATTGCTGGAGCCGA
GCAGGCGCATCAGGCCCACCGTCATCGCCATTCCGGAACAGGAGCAGTCG
GTGAACAGCGAGCTGGCCACCCGTCGCGCACGCCTGGACAGCATCACGGG
AATCCGCCGGCTGTCGCGCTCCAAGAAGCCCAGCCACCACCGATCGAACC
TCCGCCGCAACATCTCGATCCGGAACTCCAACTTCCTTAAGGATATGCGC
ATTCACCGCAACTCGATCCACTACCGCGGGGCCATGCTGAACACGCACCG
CTACCGGCTGCGCGCCTCCTCCTGTCCCAACATCTACCGCAACTCGATGA
CCACCATCGCCAAAGAGGAGGAAGATACCTGGTATGACAACTTTGTGGAC
ACCATGAAGTCCATCTTTGACTTTTCACTCTTTCTGGACATGAAGTTCGC
CCTCTTCAATCTCTCTACATTGTTTTTGTTCATTTGGTTCATTATCCCCT
ATCTGTACCTTCCCGATTACATGAAGCAATACAAGTACGACGTGAGCCAG
AGTGCCGAGTTGATTTCGGATGTCGGCATTGCCCAAACGGTGGGCATGAT
AGGACTTGGCTATCTGGGGGATCTGTCCTGGATGAACATCAATATATGCT
ACTCGCTGTGCATGCTGGTGTGCGGAGCGTCTGTGTTCTTCATGCCCCTG
CTGATTACCAACTACATGGGCCTGATGGTCATGTGCGTTATTTTCGGATT
TACGTTCGCCAGCTCCTTCTCGTTTACGCCCAGCATTCTGGTCAGTATTG
TGGATCTGGACGATTTCACGTGTGCCTACGGTCTGGTGCTGCTGGTTCAG
GGAGTTGGAATGATCGCAGGACCCCCTATTGCAGGCGTCATATACGAGTA
TACGGGCAGATGGGATGACACCTTCTATTATGCTGGAATATTTATCGCAC
TCTCTGGTGTCTGTTCGTATCTGATCGAGTTCTGTGAAAAGAAAGCACCT
AAGGAGAGTGATAGTGATGTCTTAGAGACTAAAAAAGCTCAACTTTTACA
CTAGGTTACTTACATTGCACTGTTGAACGCCGCAAGTAGAAGGCAACTGG
AGGTACTACAAATCCGAACTGTAGCATAATAATGGACTAGCATTAAATGT
TAACGAGTTTCTTATGTCAAATGGTGTTGCAGCCATAAAATCAGAGCAGA
ATTGTAACTGAAACTAAGCCTATTCCTAAGCTCTAGCCTGTAAGACTATA
CTTGACTTGACTAATCGTAGCTAAGTATCAATATACACCTAACATATACT
TACCGCACTAGGGCAATTACTAACCGCATCTTTGTCTAGACAAACTGTTC
AATTTCAATCAATATCAATGCAGTGCATCACTGCCAGGTGCAAACGGGTC
CCTCAATTGTCTTCTTTACAAAATTTAGAAAAATAGTTTTAATTGCCTTA
CATTTCGTACGAATATTAATTAAAGGGAATACAATAAACAACAATCTATG
TAACGTAAAAAAAAAAAAAAAAAA

LD30953.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:58:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG3409-RA 5373 CG3409-RA 46..5102 1..5057 25285 100 Plus
CG3409-RB 5203 CG3409-RB 384..4678 763..5057 21475 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:58:58
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 2589600..2591800 3926..1726 11005 100 Minus
chr2R 21145070 chr2R 2592448..2593414 1726..760 4835 100 Minus
chr2R 21145070 chr2R 2602319..2603080 762..1 3810 100 Minus
chr2R 21145070 chr2R 2587434..2588033 5056..4457 3000 100 Minus
chr2R 21145070 chr2R 2588095..2588336 4459..4218 1210 100 Minus
chr2R 21145070 chr2R 2588403..2588585 4218..4036 915 100 Minus
chr2R 21145070 chr2R 2589024..2589135 4038..3927 560 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:24:34 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:58:55
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 6702387..6704587 3926..1726 11005 100 Minus
2R 25286936 2R 6705235..6706201 1726..760 4835 100 Minus
2R 25286936 2R 6715104..6715865 762..1 3810 100 Minus
2R 25286936 2R 6700220..6700820 5057..4457 3005 100 Minus
2R 25286936 2R 6700882..6701123 4459..4218 1210 100 Minus
2R 25286936 2R 6701190..6701372 4218..4036 915 100 Minus
2R 25286936 2R 6701811..6701922 4038..3927 560 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:17:05
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 6703586..6705786 3926..1726 11005 100 Minus
2R 25260384 2R 6706434..6707400 1726..760 4835 100 Minus
2R 25260384 2R 6716303..6717064 762..1 3810 100 Minus
2R 25260384 2R 6701419..6702019 5057..4457 3005 100 Minus
2R 25260384 2R 6702081..6702322 4459..4218 1210 100 Minus
2R 25260384 2R 6702389..6702571 4218..4036 915 100 Minus
2R 25260384 2R 6703010..6703121 4038..3927 560 100 Minus
Blast to na_te.dros performed 2019-03-16 21:58:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1498..1587 1929..2018 126 60 Plus

LD30953.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:59:54 Download gff for LD30953.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 2588403..2588584 4037..4218 100 <- Minus
chr2R 2589026..2589135 3927..4036 100 <- Minus
chr2R 2589600..2591799 1727..3926 100 <- Minus
chr2R 2592448..2592942 1232..1726 100 == Minus
chr2R 2587434..2588030 4460..5056 100 <- Minus
chr2R 2588095..2588335 4219..4459 100 <- Minus
chr2R 2593016..2593411 763..1158 100 <- Minus
chr2R 2602319..2603080 1..762 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:31:32 Download gff for LD30953.complete
Subject Subject Range Query Range Percent Splice Strand
CG3409-RA 1..2685 1920..4604 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:57:10 Download gff for LD30953.complete
Subject Subject Range Query Range Percent Splice Strand
CG3409-RB 1..2685 1920..4604 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:07:53 Download gff for LD30953.complete
Subject Subject Range Query Range Percent Splice Strand
CG3409-RA 1..2685 1920..4604 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:40:03 Download gff for LD30953.complete
Subject Subject Range Query Range Percent Splice Strand
CG3409-RA 1..2685 1920..4604 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:36:48 Download gff for LD30953.complete
Subject Subject Range Query Range Percent Splice Strand
CG3409-RA 1..2685 1920..4604 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:31:30 Download gff for LD30953.complete
Subject Subject Range Query Range Percent Splice Strand
CG3409-RA 1..5056 1..5056 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:57:10 Download gff for LD30953.complete
Subject Subject Range Query Range Percent Splice Strand
CG3409-RA 1..5056 1..5056 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:07:53 Download gff for LD30953.complete
Subject Subject Range Query Range Percent Splice Strand
CG3409-RA 28..5083 1..5056 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:40:03 Download gff for LD30953.complete
Subject Subject Range Query Range Percent Splice Strand
CG3409-RA 1..5056 1..5056 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:36:48 Download gff for LD30953.complete
Subject Subject Range Query Range Percent Splice Strand
CG3409-RA 28..5083 1..5056 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:59:54 Download gff for LD30953.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6700221..6700817 4460..5056 100 <- Minus
2R 6700882..6701122 4219..4459 100 <- Minus
2R 6701190..6701371 4037..4218 100 <- Minus
2R 6701813..6701922 3927..4036 100 <- Minus
2R 6702387..6704586 1727..3926 100 <- Minus
2R 6705235..6706198 763..1726 100 <- Minus
2R 6715104..6715865 1..762 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:59:54 Download gff for LD30953.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6700221..6700817 4460..5056 100 <- Minus
2R 6700882..6701122 4219..4459 100 <- Minus
2R 6701190..6701371 4037..4218 100 <- Minus
2R 6701813..6701922 3927..4036 100 <- Minus
2R 6702387..6704586 1727..3926 100 <- Minus
2R 6705235..6706198 763..1726 100 <- Minus
2R 6715104..6715865 1..762 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:59:54 Download gff for LD30953.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6700221..6700817 4460..5056 100 <- Minus
2R 6700882..6701122 4219..4459 100 <- Minus
2R 6701190..6701371 4037..4218 100 <- Minus
2R 6701813..6701922 3927..4036 100 <- Minus
2R 6702387..6704586 1727..3926 100 <- Minus
2R 6705235..6706198 763..1726 100 <- Minus
2R 6715104..6715865 1..762 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:07:53 Download gff for LD30953.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 2587726..2588322 4460..5056 100 <- Minus
arm_2R 2588387..2588627 4219..4459 100 <- Minus
arm_2R 2588695..2588876 4037..4218 100 <- Minus
arm_2R 2589318..2589427 3927..4036 100 <- Minus
arm_2R 2589892..2592091 1727..3926 100 <- Minus
arm_2R 2592740..2593703 763..1726 100 <- Minus
arm_2R 2602609..2603370 1..762 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:23:07 Download gff for LD30953.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6701420..6702016 4460..5056 100 <- Minus
2R 6702081..6702321 4219..4459 100 <- Minus
2R 6702389..6702570 4037..4218 100 <- Minus
2R 6703012..6703121 3927..4036 100 <- Minus
2R 6703586..6705785 1727..3926 100 <- Minus
2R 6706434..6707397 763..1726 100 <- Minus
2R 6716303..6717064 1..762 100   Minus

LD30953.pep Sequence

Translation from 1919 to 4603

> LD30953.pep
MAKLATDPNASNNNSCEAVNNNHNGQNQSQNGGASNYQALPLTPAPANTP
LHKAIKHDLFPEVTFCNLSVEELADGAGHSRVVRSSVIELEDGTMTCLMN
GNGQVKRRKRLISNESGDSIDSSSTEKKTPKMPDGGYGWVVVFASLVVSL
IADGLSFSFGLINVELLEYFGESTSKTAWISSLFFSVPLLMGPIWSNLVD
KYGCRKMTILGGVVSAFGFALSSFCNSIEMLMVTFGIISGLGLGIGYVTA
VVSIAFWFDKKRTFATGIGASGTGIGTFVYARLTSYLIESYGWRGATLIL
GGTMLNACVCGALMRDPDWLIEENRLESRSQSVTTFSNSSVCLEEIKKLL
DTGITKEAVLDSLVTKNNTEANQQIDDPLDSALKRYRSEIFLPTFLSTQE
LDSICEVKSLSRRSLRHKEGEEAPSRENLLSMSSGAGAYPPSTAVIGSPD
DTLMGGIAHEAAEEAKKAYLASIETLSPSEKRSTGRTPNGSLRSSDEGYL
TQKHASSRYSLNENIFMAKHTTPSISNLKVNGLRHNSVDILSEDMHCYYS
KDETFALLEPSRRIRPTVIAIPEQEQSVNSELATRRARLDSITGIRRLSR
SKKPSHHRSNLRRNISIRNSNFLKDMRIHRNSIHYRGAMLNTHRYRLRAS
SCPNIYRNSMTTIAKEEEDTWYDNFVDTMKSIFDFSLFLDMKFALFNLST
LFLFIWFIIPYLYLPDYMKQYKYDVSQSAELISDVGIAQTVGMIGLGYLG
DLSWMNINICYSLCMLVCGASVFFMPLLITNYMGLMVMCVIFGFTFASSF
SFTPSILVSIVDLDDFTCAYGLVLLVQGVGMIAGPPIAGVIYEYTGRWDD
TFYYAGIFIALSGVCSYLIEFCEKKAPKESDSDVLETKKAQLLH*

LD30953.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:41:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13798-PA 906 GF13798-PA 1..906 1..894 4252 90.1 Plus
Dana\GF10083-PA 826 GF10083-PA 81..266 130..315 465 46.2 Plus
Dana\Mct1-PA 636 GF22203-PA 3..245 102..345 453 38.9 Plus
Dana\Mct1-PA 636 GF22203-PA 422..625 677..881 401 38.5 Plus
Dana\GF11460-PA 878 GF11460-PA 221..483 106..377 367 32.6 Plus
Dana\GF12035-PA 677 GF12035-PA 18..224 111..315 341 36.1 Plus
Dana\GF10083-PA 826 GF10083-PA 493..771 628..884 301 31.1 Plus
Dana\GF11460-PA 878 GF11460-PA 670..853 683..869 217 28.6 Plus
Dana\GF12035-PA 677 GF12035-PA 372..655 577..867 177 20.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:41:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10808-PA 896 GG10808-PA 1..896 1..894 4689 97.9 Plus
Dere\GG14631-PA 816 GG14631-PA 69..254 130..315 461 45.7 Plus
Dere\GG12920-PA 626 GG12920-PA 3..211 102..315 452 43.5 Plus
Dere\GG20224-PA 855 GG20224-PA 198..409 105..315 396 36.3 Plus
Dere\GG12920-PA 626 GG12920-PA 412..615 677..881 369 37.1 Plus
Dere\GG20434-PA 677 GG20434-PA 44..226 133..317 361 40 Plus
Dere\GG14631-PA 816 GG14631-PA 483..765 628..887 301 29.9 Plus
Dere\GG20224-PA 855 GG20224-PA 648..825 683..861 223 28.7 Plus
Dere\GG20434-PA 677 GG20434-PA 375..662 586..874 183 21.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 14:41:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20145-PA 925 GH20145-PA 60..925 41..894 3919 85.7 Plus
Dgri\GH14694-PA 830 GH14694-PA 83..268 130..315 467 46.8 Plus
Dgri\GH12442-PA 638 GH12442-PA 37..245 128..345 436 42.2 Plus
Dgri\GH12442-PA 638 GH12442-PA 424..633 677..883 364 35.1 Plus
Dgri\GH21849-PA 681 GH21849-PA 50..233 133..317 357 39.5 Plus
Dgri\GH22905-PA 839 GH22905-PA 210..393 133..315 332 39.1 Plus
Dgri\GH14694-PA 830 GH14694-PA 488..756 628..875 281 30.8 Plus
Dgri\GH22905-PA 839 GH22905-PA 633..816 683..869 212 28 Plus
Dgri\GH21849-PA 681 GH21849-PA 471..663 678..871 171 26.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:16:26
Subject Length Description Subject Range Query Range Score Percent Strand
chk-PC 894 CG3409-PC 1..894 1..894 4615 100 Plus
chk-PB 894 CG3409-PB 1..894 1..894 4615 100 Plus
chk-PA 894 CG3409-PA 1..894 1..894 4615 100 Plus
CG13907-PB 816 CG13907-PB 57..254 118..315 496 44.4 Plus
CG13907-PA 816 CG13907-PA 57..254 118..315 496 44.4 Plus
Mct1-PB 626 CG3456-PB 3..211 102..315 490 43.5 Plus
Mct1-PA 626 CG3456-PA 3..211 102..315 490 43.5 Plus
Sln-PA 855 CG8271-PA 198..409 105..315 384 36.3 Plus
Mct1-PB 626 CG3456-PB 412..615 677..881 376 37.1 Plus
Mct1-PA 626 CG3456-PA 412..615 677..881 376 37.1 Plus
CG8468-PB 678 CG8468-PB 44..424 133..522 366 29.9 Plus
CG8468-PA 678 CG8468-PA 44..424 133..522 366 29.9 Plus
CG8468-PC 678 CG8468-PC 44..424 133..522 366 29.9 Plus
CG11665-PB 658 CG11665-PB 23..327 100..431 352 30.2 Plus
CG11665-PA 658 CG11665-PA 23..327 100..431 352 30.2 Plus
CG13907-PB 816 CG13907-PB 485..765 630..887 321 29.9 Plus
CG13907-PA 816 CG13907-PA 485..765 630..887 321 29.9 Plus
CG8034-PA 647 CG8034-PA 11..201 133..323 281 32.5 Plus
CG12866-PC 800 CG12866-PC 243..415 133..305 250 28.3 Plus
CG12866-PB 856 CG12866-PB 299..471 133..305 250 28.3 Plus
CG12866-PD 859 CG12866-PD 299..474 133..305 237 27.8 Plus
out-PB 655 CG8062-PB 3..229 109..323 229 23.8 Plus
out-PA 655 CG8062-PA 3..229 109..323 229 23.8 Plus
CG8028-PC 563 CG8028-PC 16..245 115..356 223 25.6 Plus
CG8051-PB 616 CG8051-PB 80..349 133..389 221 24.4 Plus
CG8051-PA 616 CG8051-PA 80..349 133..389 221 24.4 Plus
Sln-PA 855 CG8271-PA 642..825 677..861 217 27 Plus
CG10019-PC 1104 CG10019-PC 384..557 133..306 217 26.9 Plus
CG10019-PB 1104 CG10019-PB 384..557 133..306 217 26.9 Plus
CG8034-PB 582 CG8034-PB 6..136 189..323 216 33.3 Plus
CG14196-PA 600 CG14196-PA 37..220 133..317 205 28.1 Plus
CG8389-PA 471 CG8389-PA 9..182 132..305 199 27.6 Plus
CG8389-PB 471 CG8389-PB 9..182 132..305 199 27.6 Plus
kar-PA 553 CG12286-PA 48..248 98..300 196 29.4 Plus
kar-PB 612 CG12286-PB 48..248 98..300 196 29.4 Plus
CG8468-PB 678 CG8468-PB 356..656 574..867 194 22.5 Plus
CG8468-PA 678 CG8468-PA 356..656 574..867 194 22.5 Plus
CG8468-PC 678 CG8468-PC 356..656 574..867 194 22.5 Plus
CG11665-PB 658 CG11665-PB 447..654 683..890 163 23.9 Plus
CG11665-PA 658 CG11665-PA 447..654 683..890 163 23.9 Plus
CG8028-PD 486 CG8028-PD 2..168 178..356 163 24.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:41:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20236-PA 924 GI20236-PA 60..924 41..894 3936 86 Plus
Dmoj\GI13878-PA 821 GI13878-PA 77..262 130..315 463 46.8 Plus
Dmoj\GI19091-PA 683 GI19091-PA 45..228 133..317 364 40.5 Plus
Dmoj\GI18390-PA 844 GI18390-PA 163..397 71..315 352 34.1 Plus
Dmoj\GI21795-PA 426 GI21795-PA 212..423 677..885 331 35.7 Plus
Dmoj\GI21795-PA 426 GI21795-PA 37..176 130..269 296 43.6 Plus
Dmoj\GI13878-PA 821 GI13878-PA 481..749 628..875 286 30.8 Plus
Dmoj\GI18390-PA 844 GI18390-PA 637..820 683..869 218 28 Plus
Dmoj\GI19091-PA 683 GI19091-PA 376..660 586..867 185 22.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:41:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10985-PA 866 GL10985-PA 28..866 30..894 3986 87.7 Plus
Dper\GL16954-PA 817 GL16954-PA 67..252 130..315 474 46.8 Plus
Dper\GL13329-PA 433 GL13329-PA 50..268 127..345 396 39.3 Plus
Dper\GL10088-PA 864 GL10088-PA 202..413 105..315 347 35.8 Plus
Dper\GL13330-PA 213 GL13330-PA 1..202 682..883 334 36.5 Plus
Dper\GL16954-PA 817 GL16954-PA 475..757 628..887 302 30.4 Plus
Dper\GL10088-PA 864 GL10088-PA 654..837 683..869 219 28.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:41:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17432-PA 889 GA17432-PA 28..889 30..894 4142 89.9 Plus
Dpse\GA12617-PA 817 GA12617-PA 67..252 130..315 474 46.8 Plus
Dpse\GA17462-PA 637 GA17462-PA 25..242 127..345 467 43.8 Plus
Dpse\GA17462-PA 637 GA17462-PA 420..624 677..882 366 35.9 Plus
Dpse\GA20945-PB 795 GA20945-PB 133..344 105..315 343 35.8 Plus
Dpse\GA21099-PA 687 GA21099-PA 50..232 133..317 342 37.8 Plus
Dpse\GA12617-PA 817 GA12617-PA 475..757 628..887 302 30.4 Plus
Dpse\GA20945-PB 795 GA20945-PB 585..768 683..869 217 28.6 Plus
Dpse\GA21099-PA 687 GA21099-PA 421..672 628..874 188 23.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:41:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20859-PA 894 GM20859-PA 1..894 1..894 4708 98.4 Plus
Dsec\GM14246-PA 819 GM14246-PA 69..254 130..315 461 45.7 Plus
Dsec\GM19211-PA 626 GM19211-PA 3..211 102..315 453 43.5 Plus
Dsec\GM21309-PA 855 GM21309-PA 198..409 105..315 396 36.3 Plus
Dsec\GM19211-PA 626 GM19211-PA 412..615 677..881 370 37.1 Plus
Dsec\GM21520-PA 715 GM21520-PA 44..226 133..317 352 39.5 Plus
Dsec\GM14246-PA 819 GM14246-PA 483..768 628..887 256 27.8 Plus
Dsec\GM21309-PA 855 GM21309-PA 648..825 683..861 221 28.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:41:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10310-PA 894 GD10310-PA 1..894 1..894 4740 98.8 Plus
Dsim\GD13503-PA 816 GD13503-PA 69..254 130..315 461 45.7 Plus
Dsim\Mct1-PA 235 GD16596-PA 3..192 102..296 395 43.1 Plus
Dsim\GD11031-PA 734 GD11031-PA 100..282 133..317 354 39.5 Plus
Dsim\GD10355-PA 658 GD10355-PA 50..327 133..431 337 31.3 Plus
Dsim\GD13503-PA 816 GD13503-PA 483..765 628..887 302 29.9 Plus
Dsim\GD11031-PA 734 GD11031-PA 468..719 628..874 181 22.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:41:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20187-PA 205 GJ20187-PA 18..205 707..894 898 88.8 Plus
Dvir\GJ11733-PA 825 GJ11733-PA 82..267 130..315 461 45.7 Plus
Dvir\GJ16967-PA 632 GJ16967-PA 3..274 102..382 451 37.4 Plus
Dvir\GJ16967-PA 632 GJ16967-PA 418..629 677..885 362 35.2 Plus
Dvir\GJ20065-PA 686 GJ20065-PA 49..232 133..317 348 37.3 Plus
Dvir\GJ21467-PA 842 GJ21467-PA 189..425 106..340 345 34.6 Plus
Dvir\GJ11733-PA 825 GJ11733-PA 486..763 628..884 286 29.8 Plus
Dvir\GJ21467-PA 842 GJ21467-PA 635..818 683..869 218 28 Plus
Dvir\GJ20065-PA 686 GJ20065-PA 420..668 628..871 187 23.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:41:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23138-PA 871 GK23138-PA 2..870 12..893 3465 75.7 Plus
Dwil\GK16068-PA 621 GK16068-PA 3..234 102..334 472 41.5 Plus
Dwil\GK16821-PA 814 GK16821-PA 69..254 130..315 471 46.8 Plus
Dwil\GK17886-PA 868 GK17886-PA 193..402 107..315 346 37.6 Plus
Dwil\GK14778-PA 662 GK14778-PA 51..260 133..354 345 34.7 Plus
Dwil\GK16068-PA 621 GK16068-PA 405..607 677..876 343 36.8 Plus
Dwil\GK16821-PA 814 GK16821-PA 476..758 628..887 315 30.1 Plus
Dwil\GK17886-PA 868 GK17886-PA 650..833 683..869 217 29.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:41:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24576-PA 898 GE24576-PA 1..898 1..894 4673 97.1 Plus
Dyak\GE20989-PA 816 GE20989-PA 69..254 130..315 461 45.7 Plus
Dyak\GE12384-PA 855 GE12384-PA 198..409 105..315 397 36.3 Plus
Dyak\GE19446-PA 657 GE19446-PA 50..280 133..379 336 33.5 Plus
Dyak\GE14741-PA 210 GE14741-PA 3..187 684..869 325 38.7 Plus
Dyak\GE20989-PA 816 GE20989-PA 483..765 628..887 301 29.9 Plus
Dyak\GE12384-PA 855 GE12384-PA 648..825 683..861 218 28.2 Plus

LD30953.hyp Sequence

Translation from 1919 to 4603

> LD30953.hyp
MAKLATDPNASNNNSCEAVNNNHNGQNQSQNGGASNYQALPLTPAPANTP
LHKAIKHDLFPEVTFCNLSVEELADGAGHSRVVRSSVIELEDGTMTCLMN
GNGQVKRRKRLISNESGDSIDSSSTEKKTPKMPDGGYGWVVVFASLVVSL
IADGLSFSFGLINVELLEYFGESTSKTAWISSLFFSVPLLMGPIWSNLVD
KYGCRKMTILGGVVSAFGFALSSFCNSIEMLMVTFGIISGLGLGIGYVTA
VVSIAFWFDKKRTFATGIGASGTGIGTFVYARLTSYLIESYGWRGATLIL
GGTMLNACVCGALMRDPDWLIEENRLESRSQSVTTFSNSSVCLEEIKKLL
DTGITKEAVLDSLVTKNNTEANQQIDDPLDSALKRYRSEIFLPTFLSTQE
LDSICEVKSLSRRSLRHKEGEEAPSRENLLSMSSGAGAYPPSTAVIGSPD
DTLMGGIAHEAAEEAKKAYLASIETLSPSEKRSTGRTPNGSLRSSDEGYL
TQKHASSRYSLNENIFMAKHTTPSISNLKVNGLRHNSVDILSEDMHCYYS
KDETFALLEPSRRIRPTVIAIPEQEQSVNSELATRRARLDSITGIRRLSR
SKKPSHHRSNLRRNISIRNSNFLKDMRIHRNSIHYRGAMLNTHRYRLRAS
SCPNIYRNSMTTIAKEEEDTWYDNFVDTMKSIFDFSLFLDMKFALFNLST
LFLFIWFIIPYLYLPDYMKQYKYDVSQSAELISDVGIAQTVGMIGLGYLG
DLSWMNINICYSLCMLVCGASVFFMPLLITNYMGLMVMCVIFGFTFASSF
SFTPSILVSIVDLDDFTCAYGLVLLVQGVGMIAGPPIAGVIYEYTGRWDD
TFYYAGIFIALSGVCSYLIEFCEKKAPKESDSDVLETKKAQLLH*

LD30953.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:20:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG3409-PC 894 CG3409-PC 1..894 1..894 4615 100 Plus
CG3409-PB 894 CG3409-PB 1..894 1..894 4615 100 Plus
CG3409-PA 894 CG3409-PA 1..894 1..894 4615 100 Plus
Mct1-PB 626 CG3456-PB 3..211 102..315 490 43.5 Plus
Mct1-PA 626 CG3456-PA 3..211 102..315 490 43.5 Plus
Mct1-PB 626 CG3456-PB 412..615 677..881 376 37.1 Plus