BDGP Sequence Production Resources |
Search the DGRC for LD31082
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 310 |
Well: | 82 |
Vector: | pOT2 |
Associated Gene/Transcript | krz-RA |
Protein status: | LD31082.pep: gold |
Preliminary Size: | 1549 |
Sequenced Size: | 1942 |
Gene | Date | Evidence |
---|---|---|
CG1487 | 2002-01-01 | Sim4 clustering to Release 2 |
CG1487 | 2002-05-18 | Blastp of sequenced clone |
CG1487 | 2003-01-01 | Sim4 clustering to Release 3 |
krz | 2008-04-29 | Release 5.5 accounting |
krz | 2008-08-15 | Release 5.9 accounting |
krz | 2008-12-18 | 5.12 accounting |
1942 bp (1942 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118946
> LD31082.complete CAACGCACACATATATTTATTTAACGGAGTTCCAATTAAGCAGGAACAGC AGAAAAGCAGAATAACAAGCATAACCGCCAAATAACATAATGAACGGTGG TGGTGGAGGAAGTGGAGGAGCAAATGTGAGCAATGGCTCCAGCACCAATG TAACAGCTGCCGGGAGCACTGGGGGCGGAAGCGCAGGCGACGAGACTGGT GGAGATGCCAGCTCCAGACGCCAGGCGACTCGGGTGTTTAAGAAGAGCTC CTCCAACGGCAAGATAACAGTTTACCTTGGCAAACGGGACTTCGTCGACC ATGTCACGCACGTGGATCCCATTGACGGTGTTGTCTTCATTGATCCAGAG TACGTAAAGGACCGTAAGGTTTTTGGCCAGGTGCTTGCCGCCTTTCGGTA CGGACGTGAAGACCTAGATGTTTTGGGATTAACGTTCCGTAAGGACCTGT ATCTGGCGCATGAGCAGATCTATCCGCCCATGCAGCTGGACCGCCCGATG ACCCGGCTTCAGGAAAGGTTAATTAAAAAGCTGGGGCCGAACGCCCATCC GTTTTATTTTGAGGTTCCGCCCTATTGCCCAGCCTCTGTGTCCTTGCAGC CGGCTCCTGGAGATGTGGGCAAGTCTTGCGGAGTAGACTACGAGCTGAAG GCCTTTGTGGGTGAGAACGTGGAGGACAAACCCCACAAGCGGAACTCGGT GCGACTAACTATTCGCAAAGTCATGTACGCACCATCCAAAGTCGGTGAGC AGCCATCGATCGAAGTAAGCAAGGAGTTTATGATGAAGCCAAACAAGATC CATTTGGAAGCTACTTTGGACAAGGAGTTATACCACCACGGCGAAAAAAT ATCGGTCAACGTTCATGTGGCCAACAACTCAAATCGGACGGTAAAAAAGA TTAAGGTATGTGTCCGGCAGTTTGCGGATATTTGTCTCTTTTCGACGGCG CAATATAAATCTGTAGTGGCAGAAATCGAGTCAGAAGACGGATGTCAAGT GGCTCCGGGATTTACACTCTCGAAGGTATTTGAGTTGTGCCCCCTATTGG CAAATAATAAGGATAAATGGGGCCTTGCTTTGGACGGGCAGCTAAAGCAT GAGGACACCAATTTGGCGTCTAGCACTCTCATTACCAATCCTGCTCAGCG TGAGAGTCTCGGTATTATGGTCCACTATAAGGTGAAGGTGAAGTTGCTGA TTAGCTCGCCACTTCTAAATGGTGACCTCGTAGCTGAGCTGCCATTCACA CTAATGCACCCTAAGCCCGAGGAGGAAGAGCATCCACTGTTAGGGGAGCG ATCGCCACGGGCTAGTTTAGCAGGCGGGGGTCTGCCGTTAGTGAGCATGA GTGACGGAGAAACTGAATCGGCTACTGGCGGGCAGGATGTGCCAACGACA ACAAATCTCATTCAGCTGGACGACGACGAGGCACAAGATGACGACATAAT TTTTGAGGACTTTGCCCGTCTGCGTCTAAAAGGCGCTGAAACAGAGGCCT AGATGAAAAAGGAATAGATCGAACTATTAATTCATATGAAGAAAATACTA CTATTATTTTCGGCATTTGTATAATATAAAAAGTATGAGAAAATTGGGCA ACCTCTAAATGTAAAGTTTTATACCAATAGCCATGGTAAACAGTTGGATT TAAGCTATTTTATATGTGTAGGCCATATATTGTAGTATCTATAGGGTTTA AGCTGAAAGTGTACGAATTTTAAAATGTGAAATTGATAAACCAGTCAACA CACCAGATCTACACAAAATGCCCACGCATAAGTTAACTACACGAGCGAAG TATTTCGGCCACACCTGTAAAAGTTGAAAGAATTCACAAAATTTGATATG TAAATGTTGTATAATATTTTTTATTAAATGCCCTCTCCCATTATAAAAAC GCATAAAACAAAAATTCATTTACAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 1053..1104 | 1916..1865 | 116 | 69.2 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 27870710..27871972 | 661..1923 | 99 | <- | Minus |
chr3R | 27873372..27874031 | 1..660 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
krz-RA | 1..1413 | 90..1502 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
krz-RB | 1..1413 | 90..1502 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
krz-RA | 1..1413 | 90..1502 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
krz-RA | 1..1413 | 90..1502 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
krz-RA | 1..1413 | 90..1502 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
krz-RA | 62..1984 | 1..1923 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
krz-RA | 62..1984 | 1..1923 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
krz-RA | 66..1988 | 1..1923 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
krz-RA | 62..1984 | 1..1923 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
krz-RA | 66..1988 | 1..1923 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 32048607..32049869 | 661..1923 | 100 | <- | Minus |
3R | 32051269..32051928 | 1..660 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 32048607..32049869 | 661..1923 | 100 | <- | Minus |
3R | 32051269..32051928 | 1..660 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 32048607..32049869 | 661..1923 | 100 | <- | Minus |
3R | 32051269..32051928 | 1..660 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 27874329..27875591 | 661..1923 | 100 | <- | Minus |
arm_3R | 27876991..27877650 | 1..660 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31789438..31790700 | 661..1923 | 100 | <- | Minus |
3R | 31792100..31792759 | 1..660 | 100 | Minus |
Translation from 89 to 1501
> LD31082.hyp MNGGGGGSGGANVSNGSSTNVTAAGSTGGGSAGDETGGDASSRRQATRVF KKSSSNGKITVYLGKRDFVDHVTHVDPIDGVVFIDPEYVKDRKVFGQVLA AFRYGREDLDVLGLTFRKDLYLAHEQIYPPMQLDRPMTRLQERLIKKLGP NAHPFYFEVPPYCPASVSLQPAPGDVGKSCGVDYELKAFVGENVEDKPHK RNSVRLTIRKVMYAPSKVGEQPSIEVSKEFMMKPNKIHLEATLDKELYHH GEKISVNVHVANNSNRTVKKIKVCVRQFADICLFSTAQYKSVVAEIESED GCQVAPGFTLSKVFELCPLLANNKDKWGLALDGQLKHEDTNLASSTLITN PAQRESLGIMVHYKVKVKLLISSPLLNGDLVAELPFTLMHPKPEEEEHPL LGERSPRASLAGGGLPLVSMSDGETESATGGQDVPTTTNLIQLDDDEAQD DDIIFEDFARLRLKGAETEA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
krz-PB | 470 | CG1487-PB | 1..470 | 1..470 | 2439 | 100 | Plus |
krz-PA | 470 | CG1487-PA | 1..470 | 1..470 | 2439 | 100 | Plus |
Arr1-PB | 364 | CG5711-PB | 6..353 | 48..396 | 931 | 50.6 | Plus |
Arr1-PA | 364 | CG5711-PA | 6..353 | 48..396 | 931 | 50.6 | Plus |
Arr2-PA | 401 | CG5962-PA | 4..394 | 46..463 | 880 | 43.3 | Plus |
Translation from 89 to 1501
> LD31082.pep MNGGGGGSGGANVSNGSSTNVTAAGSTGGGSAGDETGGDASSRRQATRVF KKSSSNGKITVYLGKRDFVDHVTHVDPIDGVVFIDPEYVKDRKVFGQVLA AFRYGREDLDVLGLTFRKDLYLAHEQIYPPMQLDRPMTRLQERLIKKLGP NAHPFYFEVPPYCPASVSLQPAPGDVGKSCGVDYELKAFVGENVEDKPHK RNSVRLTIRKVMYAPSKVGEQPSIEVSKEFMMKPNKIHLEATLDKELYHH GEKISVNVHVANNSNRTVKKIKVCVRQFADICLFSTAQYKSVVAEIESED GCQVAPGFTLSKVFELCPLLANNKDKWGLALDGQLKHEDTNLASSTLITN PAQRESLGIMVHYKVKVKLLISSPLLNGDLVAELPFTLMHPKPEEEEHPL LGERSPRASLAGGGLPLVSMSDGETESATGGQDVPTTTNLIQLDDDEAQD DDIIFEDFARLRLKGAETEA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17501-PA | 485 | GF17501-PA | 27..485 | 17..470 | 2201 | 92.8 | Plus |
Dana\GF14811-PA | 364 | GF14811-PA | 6..355 | 48..398 | 920 | 49.7 | Plus |
Dana\GF10152-PA | 401 | GF10152-PA | 4..394 | 46..463 | 897 | 43.1 | Plus |
Dana\GF19559-PA | 761 | GF19559-PA | 40..222 | 35..213 | 303 | 34.8 | Plus |
Dana\GF19559-PA | 761 | GF19559-PA | 357..571 | 222..390 | 207 | 27.9 | Plus |
Dana\GF23483-PA | 164 | GF23483-PA | 1..164 | 157..347 | 187 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11843-PA | 468 | GG11843-PA | 1..468 | 1..470 | 2448 | 98.5 | Plus |
Dere\GG21103-PA | 364 | GG21103-PA | 6..355 | 48..398 | 959 | 50.6 | Plus |
Dere\GG15065-PA | 401 | GG15065-PA | 4..394 | 46..463 | 902 | 43.6 | Plus |
Dere\GG18921-PA | 819 | GG18921-PA | 100..279 | 38..213 | 313 | 35.9 | Plus |
Dere\GG18921-PA | 819 | GG18921-PA | 424..646 | 222..390 | 200 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17469-PA | 494 | GH17469-PA | 50..494 | 28..470 | 2111 | 90.8 | Plus |
Dgri\GH11636-PA | 364 | GH11636-PA | 6..355 | 48..398 | 943 | 49.7 | Plus |
Dgri\GH16146-PA | 401 | GH16146-PA | 4..394 | 46..463 | 886 | 42.6 | Plus |
Dgri\GH22560-PA | 149 | GH22560-PA | 4..141 | 46..183 | 404 | 50.7 | Plus |
Dgri\GH12716-PA | 801 | GH12716-PA | 69..269 | 17..213 | 314 | 33.3 | Plus |
Dgri\GH12716-PA | 801 | GH12716-PA | 416..630 | 222..390 | 210 | 29.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
krz-PB | 470 | CG1487-PB | 1..470 | 1..470 | 2439 | 100 | Plus |
krz-PA | 470 | CG1487-PA | 1..470 | 1..470 | 2439 | 100 | Plus |
Arr1-PB | 364 | CG5711-PB | 6..353 | 48..396 | 931 | 50.6 | Plus |
Arr1-PA | 364 | CG5711-PA | 6..353 | 48..396 | 931 | 50.6 | Plus |
Arr2-PA | 401 | CG5962-PA | 4..394 | 46..463 | 880 | 43.3 | Plus |
Arr1-PC | 350 | CG5711-PC | 21..339 | 77..396 | 827 | 49.2 | Plus |
CG32683-PB | 804 | CG32683-PB | 55..268 | 14..211 | 312 | 31.8 | Plus |
CG32683-PA | 804 | CG32683-PA | 55..268 | 14..211 | 312 | 31.8 | Plus |
CG32683-PB | 804 | CG32683-PB | 409..630 | 222..390 | 194 | 27.4 | Plus |
CG32683-PA | 804 | CG32683-PA | 409..630 | 222..390 | 194 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22795-PA | 498 | GI22795-PA | 60..498 | 34..470 | 2111 | 92.1 | Plus |
Dmoj\GI17937-PA | 364 | GI17937-PA | 6..355 | 48..398 | 946 | 49.7 | Plus |
Dmoj\GI12414-PA | 401 | GI12414-PA | 4..394 | 46..463 | 908 | 43.6 | Plus |
Dmoj\GI15392-PA | 824 | GI15392-PA | 108..274 | 48..213 | 308 | 36.3 | Plus |
Dmoj\GI15392-PA | 824 | GI15392-PA | 445..659 | 222..390 | 219 | 30.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24101-PA | 479 | GL24101-PA | 59..479 | 40..470 | 2025 | 90.2 | Plus |
Dper\GL14653-PA | 363 | GL14653-PA | 6..353 | 48..396 | 918 | 50 | Plus |
Dper\GL10292-PA | 401 | GL10292-PA | 4..394 | 46..463 | 904 | 43.8 | Plus |
Dper\GL14887-PA | 673 | GL14887-PA | 135..301 | 48..213 | 294 | 35.7 | Plus |
Dper\GL14887-PA | 673 | GL14887-PA | 449..564 | 222..336 | 198 | 35.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13309-PA | 492 | GA13309-PA | 59..492 | 40..470 | 2120 | 93.1 | Plus |
Dpse\GA19076-PA | 363 | GA19076-PA | 6..353 | 48..396 | 918 | 50 | Plus |
Dpse\GA19261-PA | 401 | GA19261-PA | 4..394 | 46..463 | 904 | 43.8 | Plus |
Dpse\GA17070-PA | 968 | GA17070-PA | 185..351 | 48..213 | 295 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16407-PA | 471 | GM16407-PA | 1..471 | 1..470 | 2480 | 99.2 | Plus |
Dsec\GM17260-PA | 364 | GM17260-PA | 6..355 | 48..398 | 959 | 50.6 | Plus |
Dsec\GM24922-PA | 401 | GM24922-PA | 4..394 | 46..463 | 894 | 43.3 | Plus |
Dsec\GM11315-PA | 581 | GM11315-PA | 83..265 | 35..213 | 309 | 35.3 | Plus |
Dsec\GM11315-PA | 581 | GM11315-PA | 405..513 | 222..327 | 183 | 33 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16195-PA | 341 | GD16195-PA | 1..341 | 131..470 | 1792 | 98.8 | Plus |
Dsim\GD24126-PA | 364 | GD24126-PA | 6..355 | 48..398 | 959 | 50.6 | Plus |
Dsim\GD12969-PA | 401 | GD12969-PA | 4..394 | 46..463 | 902 | 43.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22798-PA | 489 | GJ22798-PA | 7..489 | 2..470 | 2097 | 86 | Plus |
Dvir\GJ17709-PA | 364 | GJ17709-PA | 6..353 | 48..396 | 918 | 49.7 | Plus |
Dvir\GJ12307-PA | 401 | GJ12307-PA | 4..394 | 46..463 | 892 | 42.9 | Plus |
Dvir\GJ14789-PA | 830 | GJ14789-PA | 137..303 | 48..213 | 306 | 36.3 | Plus |
Dvir\GJ14679-PA | 92 | GJ14679-PA | 3..83 | 316..398 | 208 | 49.4 | Plus |
Dvir\GJ14789-PA | 830 | GJ14789-PA | 456..669 | 222..390 | 205 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10933-PA | 495 | GK10933-PA | 60..495 | 41..470 | 2096 | 93.4 | Plus |
Dwil\GK18171-PA | 364 | GK18171-PA | 6..355 | 48..398 | 910 | 49.4 | Plus |
Dwil\GK17474-PA | 401 | GK17474-PA | 4..394 | 46..463 | 901 | 43.3 | Plus |
Dwil\GK19772-PA | 954 | GK19772-PA | 209..375 | 48..213 | 307 | 35.1 | Plus |
Dwil\GK19772-PA | 954 | GK19772-PA | 524..639 | 222..336 | 208 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23289-PA | 471 | GE23289-PA | 1..471 | 1..470 | 2443 | 97.9 | Plus |
Dyak\Arr1-PA | 364 | GE12809-PA | 6..355 | 48..398 | 955 | 50.3 | Plus |
Dyak\GE21289-PA | 401 | GE21289-PA | 4..394 | 46..463 | 902 | 43.6 | Plus |
Dyak\GE15393-PA | 809 | GE15393-PA | 94..276 | 35..213 | 313 | 35.3 | Plus |
Dyak\GE15393-PA | 809 | GE15393-PA | 413..636 | 222..390 | 200 | 27.2 | Plus |