Clone LD31102 Report

Search the DGRC for LD31102

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:311
Well:2
Vector:pOT2
Associated Gene/TranscriptMKP-4-RB
Protein status:LD31102.pep: gold
Sequenced Size:1816

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14211 2008-04-29 Release 5.5 accounting
CG14211 2008-04-29 Picked prior to 5.5
CG14211 2008-08-15 Release 5.9 accounting
CG14211 2008-12-18 5.12 accounting

Clone Sequence Records

LD31102.complete Sequence

1816 bp assembled on 2007-10-25

GenBank Submission: BT031134

> LD31102.complete
CTAGGTCCTGTCCTCGCTCTTCTTCTTCCTCTGCCTCCAGCTGGTATCTG
TTGCCTGGCCATGGAACAGTCTCAGTCTCAACGGCAGGCGTGGCCTTCGT
CCTCCGCGGGGGGTGGCAAGGCCCAGGACTCCGGGGTGCTGACGCGCGAG
GACTTCGACGGCGGACCGGTCAGCATCGACGAGGTGGACACAGGCCTGTT
TCTAGGCAACCTGACCGCGGCGACGCACATGGAGACGCTGCGCTCCTTCA
AGATCACCCACATCCTCACGCTGGATTCGGTCCCGCTGCCGCAGCACATT
CTGGAGGCCAGCTTTCTGACCACCAAATATATACAGATTGCCGACATGCC
GCGCGAAGATATTCTGCAGCATCTGGAGGGCTGCGTTGACTTTATCAGCT
CGGCCCTGGCCCAGCAGGGCAATGTCCTTGTGCACTGCTACTTCGGCGTC
AGTCGCAGCTCATCCACTGTGATCGCTTACATGATGAAGCGACACAATCT
GGACTTCCTGCCCGCCTACGAGCTGGTCAAGGCCAAACGGCGCTTCGTCC
AGCCAAACGCTGGCTTTGTCAGCCAACTAAAGCTCTTCCGGCGCATGGGC
TGCAAGATTGACCCCAACTGCCAGCGCTACAAGATCCATCGCCTGCGCCT
GGCTGGCGAGCAGATGCGCAAGGCCAAGATCCTGCCGCAAAGCTTCCACA
GCGTGGTCCGTCCGGATCCAGATATAACGCGCGAGAACCCGGAGCCCATA
GTGTTCCGCTGTCGTCGTTGCCGCCGCGTCCTCGCCTCCAAGTCGCATGT
ACTGGAGCACAAGCCGCGTGACAGGCCGCCGCAGGAGGTGGTACCCAAGG
AGAAAGAAGAAGTCGCTGCAGCTAAGCTGCCGGCTCAGTCACATGATCAG
GCCGAAAATCATCATGGTGCTCGCATGCTGGAGCAGCTGTCCGAGCGCAT
CCGCCAGTCATCACTCGGTTCACCCGGCCACGAAAGCACGCCAAACTATT
GCCGCAGCATACTGTTTGTGGAGCCCATCGCCTGGATGCACCGCATCATG
CTGAACACCCAGGGCCGCCTGTACTGTCCCAAGTGCGAGCAGAAATTGGG
AAACTTTAGCTGGATCAACGCCTGCAAGTGTCCGTGCGGGGAGACGATGA
CGCCTGCATTTTATCTGATACCTTCCAAGGTGGAGCTCTCGAAGGCCGTG
CAGAACGTGCAGACCACGGTTTAGGTGCAGCGTGCTGGAAATAGAGCGAG
ATGGCATCATCAGAGACGGGACAATTGGACTCCCTTGTCGGCTGGCAAAG
AACGGCAATCGCCCACCTAAACAAAAAGCAATGGAGGCTTGGATTGATTG
ATCAGTGCTTATCAGTGCTGGCCAACATTGATGTCCTACATATATACATA
TATGGGCATTAAGTTATGTTTCTATGGGTCATTGGAGAAGTTGGGCTTCG
GTTACGCTGTTGAAACATAAGTTAATTGGTCCCATTGCTGAATAGCTCCT
CCACCAAGCTGAGATTTTTGAAACGCAAGCAGTTAGCTTAGTTAGTTCCC
TCTTGGGAATCCGATCTCGTATCGGATATAAACTGATTGCCAGGTTTACA
ATATCAAAACTTCCGCGCGAAGCAAACGTAATTTAATCACAAACTAACTT
CGGATTCCATTTGGTCAGTCAGTAAATATTTACTCAATTCTTAAGAATAA
GAAATAATCACAGAGTATCTCATCCGATCGCAACATTGATATGTGAATCC
CCAAAAGCTGAAAGAGATACGTTGATTGTTTCCAGTAGTGGTAAAAAAAA
AAAAAAAAAAAAAAAA

LD31102.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:35:00
Subject Length Description Subject Range Query Range Score Percent Strand
MKP-4-RB 2408 MKP-4-RB 46..1838 1..1793 8965 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:45:17
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 19512571..19513254 437..1120 3405 99.9 Plus
chrX 22417052 chrX 19513319..19513995 1120..1792 3275 99.3 Plus
chrX 22417052 chrX 19511942..19512147 1..206 1030 100 Plus
chrX 22417052 chrX 19512207..19512340 204..337 670 100 Plus
chrX 22417052 chrX 19512407..19512506 338..437 500 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:24:46 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:45:15
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19623779..19624462 437..1120 3420 100 Plus
X 23542271 X 19624527..19625200 1120..1793 3370 100 Plus
X 23542271 X 19623150..19623355 1..206 1030 100 Plus
X 23542271 X 19623415..19623548 204..337 670 100 Plus
X 23542271 X 19623615..19623714 338..437 500 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:31:38
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 19631877..19632560 437..1120 3420 100 Plus
X 23527363 X 19632625..19633298 1120..1793 3370 100 Plus
X 23527363 X 19631248..19631453 1..206 1030 100 Plus
X 23527363 X 19631513..19631646 204..337 670 100 Plus
X 23527363 X 19631713..19631812 338..437 500 100 Plus
Blast to na_te.dros performed on 2019-03-16 16:45:16 has no hits.

LD31102.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:46:35 Download gff for LD31102.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 19511942..19512146 1..205 100 -> Plus
chrX 19512209..19512340 206..337 100 -> Plus
chrX 19512407..19512506 338..437 100 -> Plus
chrX 19512572..19513254 438..1120 99 -> Plus
chrX 19513320..19513995 1121..1792 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:12:16 Download gff for LD31102.complete
Subject Subject Range Query Range Percent Splice Strand
CG14211-RB 1..1164 61..1224 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:04:40 Download gff for LD31102.complete
Subject Subject Range Query Range Percent Splice Strand
MKP-4-RB 1..1164 61..1224 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:44:00 Download gff for LD31102.complete
Subject Subject Range Query Range Percent Splice Strand
MKP-4-RB 1..1164 61..1224 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:50:59 Download gff for LD31102.complete
Subject Subject Range Query Range Percent Splice Strand
CG14211-RB 1..1164 61..1224 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:40:15 Download gff for LD31102.complete
Subject Subject Range Query Range Percent Splice Strand
MKP-4-RB 1..1164 61..1224 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 16:56:49 Download gff for LD31102.complete
Subject Subject Range Query Range Percent Splice Strand
CG14211-RB 37..1828 1..1792 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:04:40 Download gff for LD31102.complete
Subject Subject Range Query Range Percent Splice Strand
MKP-4-RB 37..1828 1..1792 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:44:00 Download gff for LD31102.complete
Subject Subject Range Query Range Percent Splice Strand
MKP-4-RB 37..1828 1..1792 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:50:59 Download gff for LD31102.complete
Subject Subject Range Query Range Percent Splice Strand
CG14211-RB 37..1828 1..1792 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:40:15 Download gff for LD31102.complete
Subject Subject Range Query Range Percent Splice Strand
MKP-4-RB 37..1828 1..1792 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:46:35 Download gff for LD31102.complete
Subject Subject Range Query Range Percent Splice Strand
X 19623615..19623714 338..437 100 -> Plus
X 19623150..19623354 1..205 100 -> Plus
X 19623417..19623548 206..337 100 -> Plus
X 19623780..19624462 438..1120 100 -> Plus
X 19624528..19625199 1121..1792 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:46:35 Download gff for LD31102.complete
Subject Subject Range Query Range Percent Splice Strand
X 19623615..19623714 338..437 100 -> Plus
X 19623150..19623354 1..205 100 -> Plus
X 19623417..19623548 206..337 100 -> Plus
X 19623780..19624462 438..1120 100 -> Plus
X 19624528..19625199 1121..1792 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:46:35 Download gff for LD31102.complete
Subject Subject Range Query Range Percent Splice Strand
X 19623615..19623714 338..437 100 -> Plus
X 19623150..19623354 1..205 100 -> Plus
X 19623417..19623548 206..337 100 -> Plus
X 19623780..19624462 438..1120 100 -> Plus
X 19624528..19625199 1121..1792 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:44:00 Download gff for LD31102.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 19517183..19517387 1..205 100 -> Plus
arm_X 19517450..19517581 206..337 100 -> Plus
arm_X 19517648..19517747 338..437 100 -> Plus
arm_X 19517813..19518495 438..1120 100 -> Plus
arm_X 19518561..19519232 1121..1792 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:56:47 Download gff for LD31102.complete
Subject Subject Range Query Range Percent Splice Strand
X 19631878..19632560 438..1120 100 -> Plus
X 19632626..19633297 1121..1792 100   Plus
X 19631248..19631452 1..205 100 -> Plus
X 19631515..19631646 206..337 100 -> Plus
X 19631713..19631812 338..437 100 -> Plus

LD31102.hyp Sequence

Translation from 0 to 1223

> LD31102.hyp
LGPVLALLLPLPPAGICCLAMEQSQSQRQAWPSSSAGGGKAQDSGVLTRE
DFDGGPVSIDEVDTGLFLGNLTAATHMETLRSFKITHILTLDSVPLPQHI
LEASFLTTKYIQIADMPREDILQHLEGCVDFISSALAQQGNVLVHCYFGV
SRSSSTVIAYMMKRHNLDFLPAYELVKAKRRFVQPNAGFVSQLKLFRRMG
CKIDPNCQRYKIHRLRLAGEQMRKAKILPQSFHSVVRPDPDITRENPEPI
VFRCRRCRRVLASKSHVLEHKPRDRPPQEVVPKEKEEVAAAKLPAQSHDQ
AENHHGARMLEQLSERIRQSSLGSPGHESTPNYCRSILFVEPIAWMHRIM
LNTQGRLYCPKCEQKLGNFSWINACKCPCGETMTPAFYLIPSKVELSKAV
QNVQTTV*

LD31102.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:08:04
Subject Length Description Subject Range Query Range Score Percent Strand
MKP-4-PC 387 CG14211-PC 1..387 21..407 2038 100 Plus
MKP-4-PB 387 CG14211-PB 1..387 21..407 2038 100 Plus
CG10089-PA 327 CG10089-PA 5..167 59..227 222 32.9 Plus
CG10089-PB 327 CG10089-PB 5..167 59..227 222 32.9 Plus
CG10089-PC 327 CG10089-PC 11..167 65..227 220 33.5 Plus

LD31102.pep Sequence

Translation from 60 to 1223

> LD31102.pep
MEQSQSQRQAWPSSSAGGGKAQDSGVLTREDFDGGPVSIDEVDTGLFLGN
LTAATHMETLRSFKITHILTLDSVPLPQHILEASFLTTKYIQIADMPRED
ILQHLEGCVDFISSALAQQGNVLVHCYFGVSRSSSTVIAYMMKRHNLDFL
PAYELVKAKRRFVQPNAGFVSQLKLFRRMGCKIDPNCQRYKIHRLRLAGE
QMRKAKILPQSFHSVVRPDPDITRENPEPIVFRCRRCRRVLASKSHVLEH
KPRDRPPQEVVPKEKEEVAAAKLPAQSHDQAENHHGARMLEQLSERIRQS
SLGSPGHESTPNYCRSILFVEPIAWMHRIMLNTQGRLYCPKCEQKLGNFS
WINACKCPCGETMTPAFYLIPSKVELSKAVQNVQTTV*

LD31102.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:46:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20412-PA 374 GF20412-PA 14..374 18..387 1726 86.5 Plus
Dana\GF10970-PA 443 GF10970-PA 5..138 39..176 228 34.5 Plus
Dana\GF24925-PA 203 GF24925-PA 73..199 46..174 223 40 Plus
Dana\GF18676-PA 1219 GF18676-PA 433..594 46..211 210 31.8 Plus
Dana\GF10784-PA 461 GF10784-PA 215..409 31..236 193 27.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:46:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19239-PA 385 GG19239-PA 3..385 5..387 1932 96.3 Plus
Dere\GG13761-PA 443 GG13761-PA 5..138 39..176 234 35.9 Plus
Dere\GG25359-PA 499 GG25359-PA 370..498 46..176 227 41.7 Plus
Dere\GG12300-PA 1188 GG12300-PA 391..552 46..211 201 30.6 Plus
Dere\GG19201-PA 206 GG19201-PA 49..191 37..173 185 33.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:46:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24414-PA 369 GH24414-PA 4..369 6..387 1527 78 Plus
Dgri\GH25313-PA 496 GH25313-PA 365..495 46..178 237 42 Plus
Dgri\GH16683-PA 333 GH16683-PA 5..138 39..176 227 35.2 Plus
Dgri\GH16949-PA 425 GH16949-PA 224..381 31..187 204 31.5 Plus
Dgri\GH12630-PA 385 GH12630-PA 54..196 31..177 200 32 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:03:23
Subject Length Description Subject Range Query Range Score Percent Strand
MKP-4-PC 387 CG14211-PC 1..387 1..387 2038 100 Plus
MKP-4-PB 387 CG14211-PB 1..387 1..387 2038 100 Plus
CG10089-PA 327 CG10089-PA 5..167 39..207 222 32.9 Plus
CG10089-PB 327 CG10089-PB 5..167 39..207 222 32.9 Plus
CG10089-PF 447 CG10089-PF 5..167 39..207 222 32.9 Plus
CG10089-PD 447 CG10089-PD 5..167 39..207 222 32.9 Plus
CG10089-PC 327 CG10089-PC 11..167 45..207 220 33.5 Plus
CG10089-PE 447 CG10089-PE 11..167 45..207 220 33.5 Plus
Mkp-PC 203 CG34099-PC 74..200 46..174 209 38.2 Plus
Mkp-PD 203 CG34099-PD 74..200 46..174 209 38.2 Plus
Mkp-PB 203 CG34099-PB 74..200 46..174 209 38.2 Plus
Mkp-PA 203 CG34099-PA 74..200 46..174 209 38.2 Plus
Mkp3-PA 241 CG14080-PA 9..198 4..187 189 29.5 Plus
Mkp3-PD 411 CG14080-PD 179..368 4..187 189 29.5 Plus
Mkp3-PB 411 CG14080-PB 179..368 4..187 189 29.5 Plus
Mkp3-PC 497 CG14080-PC 179..368 4..187 189 29.5 Plus
puc-PB 369 CG7850-PB 70..156 89..173 182 42.5 Plus
puc-PA 476 CG7850-PA 177..263 89..173 182 42.5 Plus
ssh-PD 1045 CG6238-PD 391..552 46..211 181 30.6 Plus
ssh-PC 1046 CG6238-PC 392..553 46..211 181 30.6 Plus
ssh-PA 1192 CG6238-PA 391..552 46..211 181 30.6 Plus
ssh-PB 1193 CG6238-PB 392..553 46..211 181 30.6 Plus
CG7378-PA 206 CG7378-PA 49..191 37..173 177 33.3 Plus
CG7378-PB 226 CG7378-PB 69..211 37..173 177 33.3 Plus
CG15528-PB 227 CG15528-PB 95..182 91..178 154 36.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:46:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16231-PA 396 GI16231-PA 3..396 13..387 1505 74.6 Plus
Dmoj\GI24889-PA 499 GI24889-PA 344..496 20..176 242 39.5 Plus
Dmoj\GI11369-PA 333 GI11369-PA 4..141 38..179 231 34.2 Plus
Dmoj\GI11809-PA 419 GI11809-PA 218..375 31..187 215 32.7 Plus
Dmoj\GI10555-PA 1213 GI10555-PA 397..563 41..211 196 30.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:46:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL27059-PA 320 GL27059-PA 11..320 19..387 1224 67.6 Plus
Dper\GL16086-PA 504 GL16086-PA 349..499 20..174 243 38.8 Plus
Dper\GL20791-PA 305 GL20791-PA 5..141 39..179 227 33.3 Plus
Dper\GL20790-PA 471 GL20790-PA 5..138 39..176 224 33.8 Plus
Dper\GL24256-PA 489 GL24256-PA 178..264 89..173 189 42.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:46:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12826-PA 380 GA12826-PA 11..380 19..387 1695 86.3 Plus
Dpse\GA20054-PA 504 GA20054-PA 349..499 20..174 243 38.8 Plus
Dpse\GA10063-PA 598 GA10063-PA 5..138 39..176 226 33.8 Plus
Dpse\GA19465-PD 1082 GA19465-PD 386..547 46..211 199 30.6 Plus
Dpse\GA19465-PC 1093 GA19465-PC 397..558 46..211 198 30.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:46:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22974-PA 388 GM22974-PA 1..388 1..387 2029 97.9 Plus
Dsec\GM24587-PA 440 GM24587-PA 5..138 39..176 234 35.9 Plus
Dsec\GM14299-PA 499 GM14299-PA 370..496 46..174 219 39.7 Plus
Dsec\GM23443-PA 1185 GM23443-PA 391..552 46..211 201 30.6 Plus
Dsec\GM14895-PA 411 GM14895-PA 210..374 31..188 191 31 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:46:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12655-PA 443 GD12655-PA 5..138 39..176 234 35.9 Plus
Dsim\GD13536-PA 499 GD13536-PA 370..497 46..175 221 39.4 Plus
Dsim\GD18249-PA 1247 GD18249-PA 391..552 46..211 201 30.6 Plus
Dsim\GD12305-PA 411 GD12305-PA 210..368 31..187 193 31.5 Plus
Dsim\GD17418-PA 206 GD17418-PA 49..191 37..173 184 32.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:46:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15922-PA 374 GJ15922-PA 3..374 12..387 1530 77.5 Plus
Dvir\GJ12898-PA 513 GJ12898-PA 358..510 20..176 241 38.9 Plus
Dvir\GJ11624-PA 465 GJ11624-PA 5..138 39..176 228 34.5 Plus
Dvir\GJ13512-PA 417 GJ13512-PA 216..373 31..187 212 32.7 Plus
Dvir\GJ22910-PA 1192 GJ22910-PA 401..567 41..211 196 29.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:46:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25725-PA 385 GK25725-PA 16..385 12..387 1568 77.2 Plus
Dwil\GK17106-PA 458 GK17106-PA 5..138 39..176 237 35.9 Plus
Dwil\GK25867-PA 508 GK12492-PA 365..496 46..176 224 39.4 Plus
Dwil\GK14268-PA 1198 GK14268-PA 390..551 46..211 202 31.2 Plus
Dwil\GK25841-PA 206 GK25841-PA 49..191 37..173 187 34 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:46:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15858-PA 385 GE15858-PA 3..385 5..387 1977 96.3 Plus
Dyak\GE20058-PA 443 GE20058-PA 5..138 39..176 235 35.9 Plus
Dyak\GE26463-PA 495 GE21044-PA 366..492 46..174 232 42.7 Plus
Dyak\GE10755-PA 1189 GE10755-PA 391..552 46..211 201 30.6 Plus
Dyak\GE22784-PA 279 GE22784-PA 78..242 31..188 190 31 Plus