BDGP Sequence Production Resources |
Search the DGRC for LD31163
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 311 |
Well: | 63 |
Vector: | pOT2 |
Associated Gene/Transcript | ssp-RA |
Protein status: | LD31163.pep: gold |
Preliminary Size: | 1487 |
Sequenced Size: | 1389 |
Gene | Date | Evidence |
---|---|---|
CG17153 | 2001-01-01 | Release 2 assignment |
CG17153 | 2001-11-09 | Blastp of sequenced clone |
CG17153 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17153 | 2008-04-29 | Release 5.5 accounting |
CG17153 | 2008-08-15 | Release 5.9 accounting |
CG17153 | 2008-12-18 | 5.12 accounting |
1389 bp (1389 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069574
> LD31163.complete ACATGATTGAGGCCCGCACGATGCAGGACGTATCAAAATTCGAATCCAAC CAGGTGATCTCGGCGAAGGTGCTCCGCGGCGAGTACCGGCTACTACGACG CAAGCAGCGCGGCTCCGTGTGGAAGGTGTATCGGGAAATCGTGCGCACCG ATGGTGCCATAATCAATGGACTCTACTTCTGCACGGGCTGCAAGCGCGTC ATGCGATCCTTCAACACGTCCAATCTGCGCACCCACAAGTGCCATGTGGA CTACCTGCGTACCGAGGAACTGTGCGAGGAGGGGATCGCGGAAATCCATC CCCCTAAACTAGACGATTCGTTGGAGCGCCGCCTGAGCTGGAACTCCTTT CAGCCGTCCGAGTGGTCATTCCACGCGGTCGAACTGCTGCTCGAGCTTTG GGCAAGGCACTGCGTCGATTTGCGAGACTCACGCAAGCGGGTCCAGGTTA TCTGGAAAATGACGGGCGAGATGAAGTCACTGGGTTTCACGTTCACGGAG ATAAAGAACAAAATTGATGACATGGGCCAACAGTATCGGCGAGAATCGCA CATGGAAAAGACAACTGGACACAAATCCCAGTGGGAATACTTCGAGACCA TGAAGATGATATTTAGTTCCGATCGTAACATAATTGACAATATGCCTCTG GATAAGTCTGGAAGTGCACCCAATACGACCAGCGAACACAATTCATTTGG CAGTCAACTTGACGAACCATTGATAGATAGGAACTACTTAAGGTCCCAAA AAGTACACCCTGGAGAAGGGGATAGCTTCGATATGAACGAATATGCGGAT GAAGCACAAGAAGACGTGGATGAACTGCGTATTCTGAAGGATAACATAAT CAGGGAAATCGAAGAGTCGTCCACAGTTCATTCCCAGGAAAACTATGAAG ACGAGCTCGATCAACAGAATTCCAAGACCGAGGACATGAAAATTGCTAAG CGTCAAAGAGCTGCCAGAATTATGGAAATAGAGGAGGAAAAGCTGGTCAT AGAGAGGAAAAAATGCAAACTGATGAAATTTTTCGTGCGAGAGATGTCGT CGTTTCATAAGGACTTCATGGATCTTCTATCTAATCCCAAAGGCGGCGCA CATGCATAAATACCTGTTCGCGATTTGAGTGATTGCACAATAAAGTTCAT TTCCACCGTTATTAACGTAAACTTAAAAGGCATCACATTCAACGAATTTT TAAAAAAATCATGTAACAGAAAGTTTAAATATCTCATTTCGGCAGTCACT CAATTTTTTATTTCAAATACGAATAAGTATAAAATGATTTGTGATTCATT GCGTTTTATTACAATTCAGCAGATATGTTTAAGATTTAATAAAATGAAGT CGTAATAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17153-RA | 1504 | CG17153-RA | 129..1485 | 1..1357 | 6785 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 12109724..12110543 | 538..1357 | 4100 | 100 | Plus |
chr3L | 24539361 | chr3L | 12109066..12109380 | 1..315 | 1575 | 100 | Plus |
chr3L | 24539361 | chr3L | 12109441..12109665 | 315..539 | 1125 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 12118971..12119790 | 538..1357 | 4100 | 100 | Plus |
3L | 28110227 | 3L | 12118313..12118627 | 1..315 | 1575 | 100 | Plus |
3L | 28110227 | 3L | 12118688..12118912 | 315..539 | 1125 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 12112071..12112890 | 538..1357 | 4100 | 100 | Plus |
3L | 28103327 | 3L | 12111413..12111727 | 1..315 | 1575 | 100 | Plus |
3L | 28103327 | 3L | 12111788..12112012 | 315..539 | 1125 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tc1 | 1666 | Tc1 TC1 1666bp | 1503..1563 | 1224..1285 | 118 | 67.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 12109066..12109379 | 1..314 | 100 | -> | Plus |
chr3L | 12109441..12109664 | 315..538 | 100 | -> | Plus |
chr3L | 12109725..12110543 | 539..1357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17153-RA | 1..1107 | 3..1109 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ssp-RA | 1..1107 | 3..1109 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ssp-RA | 1..1107 | 3..1109 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17153-RA | 1..1107 | 3..1109 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ssp-RA | 1..1107 | 3..1109 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17153-RA | 71..1429 | 1..1359 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ssp-RA | 71..1429 | 1..1359 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ssp-RA | 57..1412 | 1..1356 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17153-RA | 71..1429 | 1..1359 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ssp-RA | 57..1412 | 1..1356 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12118313..12118626 | 1..314 | 100 | -> | Plus |
3L | 12118688..12118911 | 315..538 | 100 | -> | Plus |
3L | 12118972..12119790 | 539..1357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12118313..12118626 | 1..314 | 100 | -> | Plus |
3L | 12118688..12118911 | 315..538 | 100 | -> | Plus |
3L | 12118972..12119790 | 539..1357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12118313..12118626 | 1..314 | 100 | -> | Plus |
3L | 12118688..12118911 | 315..538 | 100 | -> | Plus |
3L | 12118972..12119790 | 539..1357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 12111788..12112011 | 315..538 | 100 | -> | Plus |
arm_3L | 12111413..12111726 | 1..314 | 100 | -> | Plus |
arm_3L | 12112072..12112890 | 539..1357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12111413..12111726 | 1..314 | 100 | -> | Plus |
3L | 12111788..12112011 | 315..538 | 100 | -> | Plus |
3L | 12112072..12112890 | 539..1357 | 100 | Plus |
Translation from 2 to 1108
> LD31163.pep MIEARTMQDVSKFESNQVISAKVLRGEYRLLRRKQRGSVWKVYREIVRTD GAIINGLYFCTGCKRVMRSFNTSNLRTHKCHVDYLRTEELCEEGIAEIHP PKLDDSLERRLSWNSFQPSEWSFHAVELLLELWARHCVDLRDSRKRVQVI WKMTGEMKSLGFTFTEIKNKIDDMGQQYRRESHMEKTTGHKSQWEYFETM KMIFSSDRNIIDNMPLDKSGSAPNTTSEHNSFGSQLDEPLIDRNYLRSQK VHPGEGDSFDMNEYADEAQEDVDELRILKDNIIREIEESSTVHSQENYED ELDQQNSKTEDMKIAKRQRAARIMEIEEEKLVIERKKCKLMKFFVREMSS FHKDFMDLLSNPKGGAHA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20046-PA | 338 | GF20046-PA | 6..331 | 14..355 | 526 | 36.2 | Plus |
Dana\GF23586-PA | 418 | GF23586-PA | 167..413 | 121..359 | 238 | 27.5 | Plus |
Dana\GF23587-PA | 280 | GF23587-PA | 20..89 | 19..86 | 216 | 57.1 | Plus |
Dana\GF10849-PA | 217 | GF10849-PA | 4..90 | 12..97 | 172 | 40.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15557-PA | 367 | GG15557-PA | 1..367 | 1..368 | 1735 | 87.2 | Plus |
Dere\GG15556-PA | 385 | GG15556-PA | 155..380 | 121..359 | 223 | 29.4 | Plus |
Dere\GG15558-PA | 299 | GG15558-PA | 28..97 | 19..86 | 213 | 55.7 | Plus |
Dere\GG13372-PA | 213 | GG13372-PA | 8..79 | 19..86 | 158 | 42.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14652-PA | 313 | GH14652-PA | 15..89 | 14..86 | 215 | 54.7 | Plus |
Dgri\GH16915-PA | 252 | GH16915-PA | 8..94 | 19..102 | 172 | 41.6 | Plus |
Dgri\GH14651-PA | 410 | GH14651-PA | 184..267 | 120..204 | 154 | 35.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ssp-PA | 368 | CG17153-PA | 1..368 | 1..368 | 1931 | 100 | Plus |
vers-PA | 391 | CG6801-PA | 154..388 | 121..361 | 270 | 29.4 | Plus |
CG11560-PA | 303 | CG11560-PA | 23..97 | 14..86 | 210 | 54.7 | Plus |
CG11560-PB | 307 | CG11560-PB | 23..97 | 14..86 | 210 | 54.7 | Plus |
CG34116-PA | 211 | CG34116-PA | 8..84 | 19..91 | 156 | 39.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11637-PA | 274 | GI11637-PA | 15..89 | 14..86 | 220 | 56 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15728-PA | 391 | GL15728-PA | 23..389 | 14..361 | 503 | 34.5 | Plus |
Dper\GL15726-PA | 268 | GL15726-PA | 62..262 | 121..359 | 232 | 28 | Plus |
Dper\GL15729-PA | 290 | GL15729-PA | 14..88 | 14..86 | 216 | 56 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23780-PA | 378 | GA23780-PA | 19..376 | 14..361 | 506 | 34.5 | Plus |
Dpse\GA23779-PA | 273 | GA23779-PA | 70..267 | 121..359 | 224 | 29.9 | Plus |
Dpse\GA23781-PA | 290 | GA23781-PA | 14..88 | 14..86 | 216 | 56 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25325-PA | 368 | GM25325-PA | 1..368 | 1..368 | 1902 | 94.8 | Plus |
Dsec\GM25326-PA | 298 | GM25326-PA | 28..97 | 19..86 | 218 | 57.1 | Plus |
Dsec\GM25324-PA | 390 | GM25324-PA | 154..386 | 121..359 | 214 | 28 | Plus |
Dsec\GM16254-PA | 211 | GM16254-PA | 8..79 | 19..86 | 157 | 42.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14356-PA | 298 | GD14356-PA | 28..97 | 19..86 | 219 | 57.1 | Plus |
Dsim\GD14355-PA | 260 | GD14355-PA | 154..243 | 121..210 | 165 | 33.3 | Plus |
Dsim\GD12250-PA | 211 | GD12250-PA | 8..79 | 19..86 | 156 | 42.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11319-PA | 281 | GJ11319-PA | 15..89 | 14..86 | 216 | 54.7 | Plus |
Dvir\GJ11318-PA | 342 | GJ11318-PA | 133..342 | 120..363 | 176 | 26 | Plus |
Dvir\GJ14005-PA | 256 | GJ14005-PA | 8..124 | 19..143 | 165 | 35.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16966-PA | 344 | GK16966-PA | 15..89 | 14..86 | 232 | 57.3 | Plus |
Dwil\GK16703-PA | 264 | GK16703-PA | 4..88 | 12..95 | 164 | 39.3 | Plus |
Dwil\GK16965-PA | 462 | GK16965-PA | 112..259 | 82..238 | 156 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21881-PA | 368 | GE21881-PA | 1..368 | 1..368 | 1680 | 85.1 | Plus |
Dyak\GE21882-PA | 305 | GE21882-PA | 28..105 | 19..94 | 219 | 53.8 | Plus |
Dyak\GE21880-PA | 383 | GE21880-PA | 151..234 | 121..204 | 163 | 34.5 | Plus |
Dyak\GE22465-PA | 213 | GE22465-PA | 8..79 | 19..86 | 158 | 42.5 | Plus |
Translation from 2 to 1108
> LD31163.hyp MIEARTMQDVSKFESNQVISAKVLRGEYRLLRRKQRGSVWKVYREIVRTD GAIINGLYFCTGCKRVMRSFNTSNLRTHKCHVDYLRTEELCEEGIAEIHP PKLDDSLERRLSWNSFQPSEWSFHAVELLLELWARHCVDLRDSRKRVQVI WKMTGEMKSLGFTFTEIKNKIDDMGQQYRRESHMEKTTGHKSQWEYFETM KMIFSSDRNIIDNMPLDKSGSAPNTTSEHNSFGSQLDEPLIDRNYLRSQK VHPGEGDSFDMNEYADEAQEDVDELRILKDNIIREIEESSTVHSQENYED ELDQQNSKTEDMKIAKRQRAARIMEIEEEKLVIERKKCKLMKFFVREMSS FHKDFMDLLSNPKGGAHA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ssp-PA | 368 | CG17153-PA | 1..368 | 1..368 | 1931 | 100 | Plus |
l(3)j2D3-PA | 391 | CG6801-PA | 154..388 | 121..361 | 270 | 29.4 | Plus |
CG11560-PA | 303 | CG11560-PA | 23..97 | 14..86 | 210 | 54.7 | Plus |
CG34116-PA | 211 | CG34116-PA | 8..84 | 19..91 | 156 | 39.7 | Plus |