Clone LD31194 Report

Search the DGRC for LD31194

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:311
Well:94
Vector:pOT2
Associated Gene/Transcriptrin-RB
Protein status:LD31194.pep: gold
Preliminary Size:3330
Sequenced Size:3273

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9412 2001-01-01 Release 2 assignment
CG9412 2001-09-19 Blastp of sequenced clone
CG9412 2003-01-01 Sim4 clustering to Release 3
rin 2008-04-29 Release 5.5 accounting
rin 2008-08-15 Release 5.9 accounting
rin 2008-12-18 5.12 accounting

Clone Sequence Records

LD31194.complete Sequence

3273 bp (3273 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058617

> LD31194.complete
AAAAAGAGGAAAAGAGGAACGAACGTCGGTTCTCTTCTCGATTCAACACA
CTTGTCCAATTTCATTGCGTTTGCGATTATTTTCTACTCAAAAGCCACAA
CATATGCATCGTAACTTAATTCAACAACAACTGTGATCGCCAAACATCAG
AAAGCAACAAAAAATACACGTCAAGAATTGCCAAACGTTCCCACACTCTC
AATCGACACAGATCAGCCACCGTGTCGATAGATCCGAGCAGCAGCTAGAA
AGAAGGGAAGCAGAAATTGGAAGCGGAGACAAAGAATCCGAGTCGAAGAG
TCCGTAGTTCAGAGAGGAAGAATCAAACGCCAGCTATGGTCATGGATGCG
ACCCAATCGCAGCAGCCTTCGCCGCAATCTGTGGGACGCGAGTTTGTCCG
CCAGTACTACACGCTGTTGAACAAGGCGCCCAACCACTTGCATCGCTTCT
ATAACCACAACTCGTCGTACATCCATGGAGAGTCCAAGCTGGTGGTCGGT
CAGCGGGAGATCCACAACCGAATCCAGCAGCTGAACTTCAACGATTGCCA
CGCGAAGATCAGCCAGGTTGATGCCCAGGCCACTTTGGGCAACGGTGTGG
TGGTTCAGGTCACCGGGGAGCTATCCAATGATGGCCAGCCGATGCGGCGT
TTTACCCAGACGTTCGTTCTGGCCGCTCAGTCGCCGAAGAAGTACTACGT
GCACAACGACATCTTCCGCTATCAGGATCTCTACATCGAGGACGAGCAGG
ATGGCGAGTCGCGATCGGAGAACGATGAGGAGCACGATGTGCAGGTCGTC
GGTGGCACTGTGGATCAAGCTGTGCAGGTGGCCGGCGATGTAGTTGCCCA
GCAGCCGCAGCAACAGCAGGCTCCTCCGCAGCCACAGGCTCAGGTCGTGG
TGCCCCAGCAGGTAGCTCCTGTAGCGGCCGGTGGTGCTGCCCCACAGCAG
ATCTTCTACCCATTGCCAGCGGGTGCTGCCGCCGGACGTCCTGTGGCTGT
TTTGCCACCAGCTCCGCAAGCCGCTGCTGTTCCACTGCCCGCGCAGTTCA
CCGTTCCGCCGCCACAGCCCATCCAGAACGGTGTGGTGTCGCACGAGGAG
CTGCAGCAGCAGCAGGTGCTGGTCCCACCCAGCGTGTCTCCCCTGGTACA
GCAGCAGCAGCCGACCGGCACGCCTGTGTTGCCCATTGTTCCAGTGCCAA
GCGCGGGCTTCCAACAGTCGCCACTGGTGGCACCACAGCTCATCCAGCAG
CAGCAGCAGCAGCAACCGGCACAGCTGCCCCCGCAGCAGCAGCAGCAGCA
GCAACCTATCCAGCAGCAGCAGCCTTTGCAACAGCAGCAACAACCGCTGG
CTGAGCCCGAGGAAGTGGAGGTGGCGCCAAGGCAGCAGAAGCCTCCCACG
CCCGTCGAGGATTTCAAGACCATTCACGAGCAGCAGCAGCAGGAGAAGTA
CGAGGCCGCCAAGCAGCAGCAGAATGAGCCCAAGACGTACGCGAATCTCT
TCAAGTCCACGTCCTCCTCGCCCAGCGGCTTTGTGAACGCCGCACTGCAG
CAGCAGCAACAGCTCCAGCAGCAACAGCAGCAGCAGCAGTCCATCAGCAG
CAACACCTATAACTCTTCCTCGGCAACCTCGGGTGGCGGTAATGGCAGTC
AGGTTAGCTACTCCACCACCGCTTCGTCGTACAACAACAGCAACGGCAAC
TCGCGACTGGACAACGGTGGCCCGCTGCCGCAGCGAAACAACTCGATCCG
CAACAACAAGGGTGACTTTGAGCAGCGTCGCTCGAGCAACACGCAGCAGT
TCGGTGATAATCAGCAGCTGTTTTTGGGCAATATACCGCACCACGCCAGC
GAGGATGATCTGCGCGAGATCTTCTCACGCTTCGGAAATGTCCTGGAGCT
GCGCATTTTGTCCAAGGCTGGCAACAAGGTGCCACCAGGCATGCGCAGTC
CGCTGAACTACGGATTCATTACCTACGACGATCCTGAGGCGGTGCAAAAG
TGCCTGGCGAACTGCCCCCTATACTTCCCGGAGAACTCACCCGATGGCCA
GAAGTTGAATGTGGAGGAGAAGAAGCCGCGTGTCCGCAACGACATGGTGC
CGCGCCAGCAGATCGGTGGCAACAACCTGAACAACAACATGGGCCGTTTG
GGCGGCAACAATGGTCCGCAGTCGCGTCCGATGGGCAACAACAATGGCAG
CGGCGGTGGCATGATGCGCAACAATGCCGGTGGCAACAATCTGCGCCAGG
GCGGCGGCGGAGGAAACGGTGCTCCTCGCCTGGGAGGCGGCGGTGGATTC
GGACAGCGCCAGGATAACCGCACCGGTGGCGGCAACAACCAGTCTAACGG
ACCGCTGCGCGGTGCCGGAAATGGACAGAGTGGTGGTGGCAACTACGGAC
GTCGCTAAGGGAATTGTCCAGCAGCACGACATCAGCAAAAGCATCAACAA
ATGAGCAACGGCAGCAGTAGCGACTATAACATCAAGAACAGCAGCAACAA
CCCAACGTTAAAAACATCGACTTCTTCCACAATGCAATCAATCAATTACA
TTCAAGAACATCTCATGCAATTAAACACACGCAAATCACACACTCATACA
CTAAGATAAAGTAGTTGGAGCAACATAAAACGTCAACTGTCCTTTAAATG
TTCCTGAGCGCAACTCTCGGGGCGTCGAACTACAAACAAAAAAGAAGGAA
AGAAAGATAGGATGTAAAGAGTTGCGTCAACGGTCCTGAGTCCCTTCTTA
GTTTAATTGCGTTAGGCTCGCTTTTTCCAGCCAGTTCGTGCCAAAATATA
CCGAAATTCTGTGCAAATCTTCGTTGTGAATCCAAAAACTAAAAGAATGT
AAGCTTCAGCTCGGCAACTGCTACTCTCTACCACCCACCACCCACTCACG
GAATCAACTTCACCTTGAAACACGTGTATTAAATTTAAGTCTCAACCAAG
CACACCCACAAAACACTCATCGCAAAACACACGATCGCACACAAAAGCCA
ACACAAGATACATACACTCACCCATTTTAGCATAAATGTAAACTTTAGTT
TCAGCTTTTGTTTGGCATTAACCTTCAACTAAAATCTATCTTAAGTACGC
AAGATGCAAGAAATTGGTTTGATACGAAGGAAAGGAGCAATGCAACACAT
TTTTGTTTGTTTTTTCATTGAATAACACCATTACTTAAGCTAAAAACAAA
AAAATAATTAAAAGGGAAAACTTACACACTTAGCTAAAAAGATATAAAGA
GAAGTAAAAAAAAAAAAAAAAAA

LD31194.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:18:42
Subject Length Description Subject Range Query Range Score Percent Strand
rin-RB 4306 rin-RB 115..3387 1..3273 16335 99.9 Plus
rin.q 4300 rin.q 109..3381 1..3273 16335 99.9 Plus
rin.g 5001 rin.g 109..3381 1..3273 16335 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:37:13
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 9473828..9475407 185..1764 7900 100 Plus
chr3R 27901430 chr3R 9476084..9477323 2016..3255 6185 99.9 Plus
chr3R 27901430 chr3R 9475718..9475969 1764..2015 1260 100 Plus
chr3R 27901430 chr3R 9471928..9472111 1..184 920 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:24:51 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:37:09
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13648918..13650497 185..1764 7900 100 Plus
3R 32079331 3R 13651174..13652431 2016..3273 6260 99.8 Plus
3R 32079331 3R 13650808..13651059 1764..2015 1260 100 Plus
3R 32079331 3R 13647017..13647200 1..184 920 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:41:54
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 13389749..13391328 185..1764 7900 100 Plus
3R 31820162 3R 13392005..13393262 2016..3273 6260 99.8 Plus
3R 31820162 3R 13391639..13391890 1764..2015 1260 100 Plus
3R 31820162 3R 13387848..13388031 1..184 920 100 Plus
Blast to na_te.dros performed 2019-03-16 16:37:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2668 1245..1614 348 60.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6731..7079 1245..1604 315 58.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2748..2856 1233..1341 239 68.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2388..2557 2419..2591 207 63.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2625..2997 1245..1613 205 55.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2343..2450 2419..2532 204 69.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6761..6845 2419..2501 203 74.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6748..6951 2389..2588 190 59.6 Plus
roo 9092 roo DM_ROO 9092bp 1071..1251 2420..2613 190 61.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6734..6975 2419..2655 187 59.3 Plus
roo 9092 roo DM_ROO 9092bp 1061..1207 2430..2586 186 61.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2331..2522 1415..1615 180 58.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6831..6920 2420..2501 161 70 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6899 1294..1479 160 58.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2285..2399 2415..2532 159 63 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6725..6791 2430..2501 150 72.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2739..2820 2418..2501 136 64.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2602..2773 2454..2625 131 57.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1501..1572 2426..2501 128 69.2 Plus
Dmer\R1A3 3772 Dmer\R1A3 MERCR1A3 3772bp 631..711 1169..1091 121 63 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6715..6798 2446..2531 119 61.6 Plus
Dvir\Uvir 6564 Dvir\Uvir VIRUVIR 6564bp 4504..4552 1426..1474 119 71.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1464..1693 2413..2637 117 56 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6752..6884 849..982 117 59.1 Plus

LD31194.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:38:00 Download gff for LD31194.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 9475249..9475407 1606..1764 100 -> Plus
chr3R 9475719..9475969 1765..2015 100 -> Plus
chr3R 9471928..9472111 1..184 100 -> Plus
chr3R 9473828..9474885 185..1242 100 == Plus
chr3R 9474988..9475189 1345..1546 100 == Plus
chr3R 9476084..9476485 2016..2417 100 == Plus
chr3R 9476593..9477323 2525..3255 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:12:22 Download gff for LD31194.complete
Subject Subject Range Query Range Percent Splice Strand
rin-RC 1..2073 336..2408 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:01:29 Download gff for LD31194.complete
Subject Subject Range Query Range Percent Splice Strand
rin-RC 1..2073 336..2408 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:20:24 Download gff for LD31194.complete
Subject Subject Range Query Range Percent Splice Strand
rin-RB 1..2073 336..2408 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:31:55 Download gff for LD31194.complete
Subject Subject Range Query Range Percent Splice Strand
rin-RC 1..2073 336..2408 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:36:06 Download gff for LD31194.complete
Subject Subject Range Query Range Percent Splice Strand
rin-RE 1..2073 336..2408 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:49:22 Download gff for LD31194.complete
Subject Subject Range Query Range Percent Splice Strand
rin-RB 53..3307 1..3255 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:01:28 Download gff for LD31194.complete
Subject Subject Range Query Range Percent Splice Strand
rin-RB 53..3307 1..3255 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:20:24 Download gff for LD31194.complete
Subject Subject Range Query Range Percent Splice Strand
rin-RB 14..3268 1..3255 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:31:56 Download gff for LD31194.complete
Subject Subject Range Query Range Percent Splice Strand
rin-RB 53..3307 1..3255 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:36:06 Download gff for LD31194.complete
Subject Subject Range Query Range Percent Splice Strand
rin-RB 14..3268 1..3255 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:38:00 Download gff for LD31194.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13647017..13647200 1..184 100 -> Plus
3R 13648918..13650497 185..1764 100 -> Plus
3R 13650809..13651059 1765..2015 100 -> Plus
3R 13651174..13652413 2016..3255 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:38:00 Download gff for LD31194.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13647017..13647200 1..184 100 -> Plus
3R 13648918..13650497 185..1764 100 -> Plus
3R 13650809..13651059 1765..2015 100 -> Plus
3R 13651174..13652413 2016..3255 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:38:00 Download gff for LD31194.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13647017..13647200 1..184 100 -> Plus
3R 13648918..13650497 185..1764 100 -> Plus
3R 13650809..13651059 1765..2015 100 -> Plus
3R 13651174..13652413 2016..3255 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:20:24 Download gff for LD31194.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 9476531..9476781 1765..2015 100 -> Plus
arm_3R 9472739..9472922 1..184 100 -> Plus
arm_3R 9474640..9476219 185..1764 100 -> Plus
arm_3R 9476896..9478135 2016..3255 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:08:33 Download gff for LD31194.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13389749..13391328 185..1764 100 -> Plus
3R 13391640..13391890 1765..2015 100 -> Plus
3R 13392005..13393244 2016..3255 100   Plus
3R 13387848..13388031 1..184 100 -> Plus

LD31194.pep Sequence

Translation from 335 to 2407

> LD31194.pep
MVMDATQSQQPSPQSVGREFVRQYYTLLNKAPNHLHRFYNHNSSYIHGES
KLVVGQREIHNRIQQLNFNDCHAKISQVDAQATLGNGVVVQVTGELSNDG
QPMRRFTQTFVLAAQSPKKYYVHNDIFRYQDLYIEDEQDGESRSENDEEH
DVQVVGGTVDQAVQVAGDVVAQQPQQQQAPPQPQAQVVVPQQVAPVAAGG
AAPQQIFYPLPAGAAAGRPVAVLPPAPQAAAVPLPAQFTVPPPQPIQNGV
VSHEELQQQQVLVPPSVSPLVQQQQPTGTPVLPIVPVPSAGFQQSPLVAP
QLIQQQQQQQPAQLPPQQQQQQQPIQQQQPLQQQQQPLAEPEEVEVAPRQ
QKPPTPVEDFKTIHEQQQQEKYEAAKQQQNEPKTYANLFKSTSSSPSGFV
NAALQQQQQLQQQQQQQQSISSNTYNSSSATSGGGNGSQVSYSTTASSYN
NSNGNSRLDNGGPLPQRNNSIRNNKGDFEQRRSSNTQQFGDNQQLFLGNI
PHHASEDDLREIFSRFGNVLELRILSKAGNKVPPGMRSPLNYGFITYDDP
EAVQKCLANCPLYFPENSPDGQKLNVEEKKPRVRNDMVPRQQIGGNNLNN
NMGRLGGNNGPQSRPMGNNNGSGGGMMRNNAGGNNLRQGGGGGNGAPRLG
GGGGFGQRQDNRTGGGNNQSNGPLRGAGNGQSGGGNYGRR*

LD31194.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 10:47:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17607-PA 692 GF17607-PA 1..692 1..690 2216 82.8 Plus
Dana\GF23973-PA 132 GF23973-PA 5..125 11..128 189 36.4 Plus
Dana\GF21708-PA 165 GF21708-PA 1..123 7..128 149 31.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 10:47:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19770-PA 686 GG19770-PA 1..686 1..690 3396 97 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 10:47:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18527-PA 675 GH18527-PA 1..657 1..676 1891 68.1 Plus
Dgri\GH16820-PA 130 GH16820-PA 5..123 11..128 164 31.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:25:32
Subject Length Description Subject Range Query Range Score Percent Strand
rin-PG 690 CG9412-PG 1..690 1..690 3628 100 Plus
rin-PF 690 CG9412-PF 1..690 1..690 3628 100 Plus
rin-PE 690 CG9412-PE 1..690 1..690 3628 100 Plus
rin-PB 690 CG9412-PB 1..690 1..690 3628 100 Plus
Wnk-PO 2243 CG7177-PO 571..931 57..421 250 26.2 Plus
Wnk-PN 2441 CG7177-PN 769..1129 57..421 250 26.2 Plus
Wnk-PL 2441 CG7177-PL 769..1129 57..421 250 26.2 Plus
Wnk-PM 2462 CG7177-PM 769..1129 57..421 250 26.2 Plus
Capr-PB 961 CG18811-PB 390..946 173..690 238 26.6 Plus
Capr-PA 961 CG18811-PA 390..946 173..690 238 26.6 Plus
CG44085-PM 864 CG44085-PM 148..458 176..490 220 28.8 Plus
CG44085-PO 2381 CG44085-PO 148..458 176..490 220 28.8 Plus
Wnk-PO 2243 CG7177-PO 965..1283 172..460 212 27.7 Plus
Wnk-PN 2441 CG7177-PN 1163..1481 172..460 212 27.7 Plus
Wnk-PL 2441 CG7177-PL 1163..1481 172..460 212 27.7 Plus
Wnk-PM 2462 CG7177-PM 1163..1481 172..460 212 27.7 Plus
CG43897-PL 500 CG43897-PL 92..400 174..437 212 28.1 Plus
CG43897-PR 446 CG43897-PR 37..346 174..437 211 28 Plus
CG43897-PA 462 CG43897-PA 53..362 174..437 211 28 Plus
CG43897-PJ 501 CG43897-PJ 92..401 174..437 211 28 Plus
CG43897-PC 501 CG43897-PC 92..401 174..437 211 28 Plus
CG43897-PB 501 CG43897-PB 92..401 174..437 211 28 Plus
CG43897-PK 502 CG43897-PK 92..402 174..437 210 27.9 Plus
Ptip-PA 2294 CG32133-PA 405..816 7..418 208 25.5 Plus
Usp10-PC 1517 CG32479-PC 432..711 167..456 205 29.5 Plus
Usp10-PA 1517 CG32479-PA 432..711 167..456 205 29.5 Plus
Ptip-PA 2294 CG32133-PA 1034..1298 169..466 204 29.9 Plus
CG44085-PH 756 CG44085-PH 131..496 174..490 204 27 Plus
CG44085-PL 833 CG44085-PL 208..573 174..490 204 27 Plus
CG44085-PI 833 CG44085-PI 208..573 174..490 204 27 Plus
CG44085-PC 836 CG44085-PC 208..573 174..490 204 27 Plus
CG44085-PF 902 CG44085-PF 131..496 174..490 204 27 Plus
CG44085-PD 918 CG44085-PD 131..496 174..490 204 27 Plus
CG44085-PG 942 CG44085-PG 131..496 174..490 204 27 Plus
CG44085-PK 979 CG44085-PK 208..573 174..490 204 27 Plus
CG44085-PJ 979 CG44085-PJ 208..573 174..490 204 27 Plus
CG44085-PN 1007 CG44085-PN 208..573 174..490 204 27 Plus
CG44085-PP 2246 CG44085-PP 104..469 174..490 204 27 Plus
dikar-PG 3080 CG42799-PG 2118..2412 175..431 204 29.9 Plus
dikar-PC 3080 CG42799-PC 2118..2412 175..431 204 29.9 Plus
dikar-PD 3222 CG42799-PD 2260..2554 175..431 204 29.9 Plus
dikar-PF 3261 CG42799-PF 2260..2554 175..431 204 29.9 Plus
Ptip-PA 2294 CG32133-PA 682..1006 100..440 203 26.5 Plus
hdc-PC 1080 CG15532-PC 655..958 209..505 200 29.1 Plus
Ptip-PA 2294 CG32133-PA 197..525 128..420 197 27.8 Plus
Spt20-PC 1646 CG17689-PC 811..1166 123..478 197 25.9 Plus
Spt20-PD 1873 CG17689-PD 811..1166 123..478 197 25.9 Plus
Spt20-PA 1873 CG17689-PA 811..1166 123..478 197 25.9 Plus
Hrb87F-PE 385 CG12749-PE 115..317 493..688 194 31.8 Plus
Hrb87F-PD 385 CG12749-PD 115..317 493..688 194 31.8 Plus
Hrb87F-PC 385 CG12749-PC 115..317 493..688 194 31.8 Plus
Hrb87F-PA 385 CG12749-PA 115..317 493..688 194 31.8 Plus
Hrb98DE-PE 360 CG9983-PE 117..342 493..688 193 29.1 Plus
Hrb98DE-PF 361 CG9983-PF 118..343 493..688 193 29.1 Plus
Hrb98DE-PD 361 CG9983-PD 118..343 493..688 193 29.1 Plus
Hrb98DE-PA 364 CG9983-PA 121..346 493..688 193 29.1 Plus
Hrb98DE-PC 365 CG9983-PC 122..347 493..688 193 29.1 Plus
Hrb98DE-PB 365 CG9983-PB 122..347 493..688 193 29.1 Plus
Ptip-PA 2294 CG32133-PA 813..1096 172..420 187 28.9 Plus
Wnk-PO 2243 CG7177-PO 758..1051 133..409 183 29 Plus
Wnk-PN 2441 CG7177-PN 956..1249 133..409 183 29 Plus
Wnk-PL 2441 CG7177-PL 956..1249 133..409 183 29 Plus
Wnk-PM 2462 CG7177-PM 956..1249 133..409 183 29 Plus
Ptip-PA 2294 CG32133-PA 388..675 158..419 182 29.6 Plus
Ptip-PA 2294 CG32133-PA 883..1167 172..418 179 31 Plus
dikar-PG 3080 CG42799-PG 2552..2915 135..454 172 27.3 Plus
dikar-PC 3080 CG42799-PC 2552..2915 135..454 172 27.3 Plus
dikar-PD 3222 CG42799-PD 2694..3057 135..454 172 27.3 Plus
dikar-PF 3261 CG42799-PF 2694..3057 135..454 172 27.3 Plus
dikar-PG 3080 CG42799-PG 2461..2750 172..418 167 28.2 Plus
dikar-PC 3080 CG42799-PC 2461..2750 172..418 167 28.2 Plus
dikar-PD 3222 CG42799-PD 2603..2892 172..418 167 28.2 Plus
dikar-PF 3261 CG42799-PF 2603..2892 172..418 167 28.2 Plus
Ptip-PA 2294 CG32133-PA 1177..1618 172..613 163 25 Plus
dikar-PG 3080 CG42799-PG 2547..2857 164..440 160 27.3 Plus
dikar-PC 3080 CG42799-PC 2547..2857 164..440 160 27.3 Plus
dikar-PD 3222 CG42799-PD 2689..2999 164..440 160 27.3 Plus
dikar-PF 3261 CG42799-PF 2689..2999 164..440 160 27.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 10:47:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22064-PA 651 GI22064-PA 1..651 1..690 1910 68.8 Plus
Dmoj\GI15738-PA 130 GI15738-PA 5..123 11..128 170 34.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 10:48:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23542-PA 697 GL23542-PA 1..678 1..675 2285 79.2 Plus
Dper\GL18713-PA 157 GL18713-PA 32..154 11..132 175 37.1 Plus
Dper\GL16396-PA 165 GL16396-PA 1..123 7..128 150 32.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 10:48:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA27297-PA 696 GA27297-PA 1..677 1..675 2267 80 Plus
Dpse\GA25766-PA 130 GA25766-PA 8..127 14..132 177 36.9 Plus
Dpse\GA14503-PA 165 GA14503-PA 1..123 7..128 152 33.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 10:48:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24117-PA 682 GM24117-PA 1..682 1..690 3429 97.8 Plus
Dsec\GM23057-PA 130 GM23057-PA 1..123 7..128 172 33.1 Plus
Dsec\Ntf-2r-PA 130 GM17275-PA 1..123 7..128 156 32.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 10:48:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18916-PA 669 GD18916-PA 1..664 1..663 3306 97.9 Plus
Dsim\Ntf-2r-PA 130 GD24139-PA 1..123 7..128 162 31.5 Plus
Dsim\Ntf-2-PA 165 GD17509-PA 1..123 7..128 148 31.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 10:48:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24112-PA 651 GJ24112-PA 1..651 1..690 1891 70.8 Plus
Dvir\GJ18599-PA 130 GJ18599-PA 5..123 11..128 173 34.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 10:48:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13947-PA 715 GK13947-PA 1..699 1..675 2028 77.5 Plus
Dwil\GK25032-PA 129 GK25032-PA 1..123 7..128 167 32.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 10:48:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE26283-PA 684 GE26283-PA 1..684 1..690 3405 97.2 Plus
Dyak\Ntf-2-PA 165 GE17902-PA 1..123 7..128 149 31.5 Plus

LD31194.hyp Sequence

Translation from 335 to 2407

> LD31194.hyp
MVMDATQSQQPSPQSVGREFVRQYYTLLNKAPNHLHRFYNHNSSYIHGES
KLVVGQREIHNRIQQLNFNDCHAKISQVDAQATLGNGVVVQVTGELSNDG
QPMRRFTQTFVLAAQSPKKYYVHNDIFRYQDLYIEDEQDGESRSENDEEH
DVQVVGGTVDQAVQVAGDVVAQQPQQQQAPPQPQAQVVVPQQVAPVAAGG
AAPQQIFYPLPAGAAAGRPVAVLPPAPQAAAVPLPAQFTVPPPQPIQNGV
VSHEELQQQQVLVPPSVSPLVQQQQPTGTPVLPIVPVPSAGFQQSPLVAP
QLIQQQQQQQPAQLPPQQQQQQQPIQQQQPLQQQQQPLAEPEEVEVAPRQ
QKPPTPVEDFKTIHEQQQQEKYEAAKQQQNEPKTYANLFKSTSSSPSGFV
NAALQQQQQLQQQQQQQQSISSNTYNSSSATSGGGNGSQVSYSTTASSYN
NSNGNSRLDNGGPLPQRNNSIRNNKGDFEQRRSSNTQQFGDNQQLFLGNI
PHHASEDDLREIFSRFGNVLELRILSKAGNKVPPGMRSPLNYGFITYDDP
EAVQKCLANCPLYFPENSPDGQKLNVEEKKPRVRNDMVPRQQIGGNNLNN
NMGRLGGNNGPQSRPMGNNNGSGGGMMRNNAGGNNLRQGGGGGNGAPRLG
GGGGFGQRQDNRTGGGNNQSNGPLRGAGNGQSGGGNYGRR*

LD31194.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:25:55
Subject Length Description Subject Range Query Range Score Percent Strand
rin-PG 690 CG9412-PG 1..690 1..690 3628 100 Plus
rin-PF 690 CG9412-PF 1..690 1..690 3628 100 Plus
rin-PE 690 CG9412-PE 1..690 1..690 3628 100 Plus
rin-PB 690 CG9412-PB 1..690 1..690 3628 100 Plus
Wnk-PN 2441 CG7177-PN 769..1129 57..421 250 26.2 Plus