BDGP Sequence Production Resources |
Search the DGRC for LD31195
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 311 |
Well: | 95 |
Vector: | pOT2 |
Associated Gene/Transcript | Spred-RB |
Protein status: | LD31195.pep: gold |
Sequenced Size: | 2208 |
Gene | Date | Evidence |
---|---|---|
Spred | 2010-12-02 | CDS novel splice |
2208 bp assembled on 2011-02-17
GenBank Submission: BT126047.1
> LD31195.complete TCTTTATGCTTTAATCATGGTGTATTTCGCCACCAACAACAACAACACCG ACACTACACGCTGCTATATTAGAATCTTTCTGATAACGAACCATGACAGA AGGACATGAAAGCGACTTCTTAGTAACAGTACGCGCACAGGTAATGACCA GAGACGAGAGCACCGAGGGCTGGCTTCCGCTGGCCGGGGGTGGCCTGGCC AATGTTTCGATCCGGAAGCGGGCTAGGCTATCCCCATTGGCATCGGGTCA TGACTACATCATCTACGGGCAGAGAATATCCGATCAGAGCGTCATCTTGA GCTGTGTGATCAATCGTGATCTGAAGTATTACAAAGTAATGCCTACATTT CATCATTGGCGCGCAGGGAAGCAGCGGAATGGACTCACATTTCAAACGGC CGCCGATGCGCGAGCCTTTGACAAGGGCGTCCTGCGCGCCTACAACGAGC TGATCGATGATGATGTATTCATGACCCTGGACTTACCTGTGGAGAGCGAG AGTTTACAAAAGATCCATTCAAGCCCCGAGGGCAGCGAGAAAAGTCACAA GAGCGTCAGCAACAACTCCGACTCGGAGAAGCTGCCTCCGCCGCCCATTC ACTACATATCCACGGACAAAACATCGGCCACCACGTCGCCGCCAGACGCA CCGCCCGCTTCTGCTGCTCCATCGCCGGCGACGGCCGGCCAGATAGCGGC CAGTGAGAACTACTCGTACGTGACGCTGACGGCGGTGCACCACGACTACA ACTATCCGGTGGTGGACCAGCCGGTGGGGGCGCAGGTGCTCAATGCTCGC AGGGAGTCGATCAGTGCACTAAAGAAGCGCAACGCTCTGGAGGCAGCGCA GGCGATGGCGGCGGCTCAGACGGCGGCGGGTGGTGGACTGGCCTGTCGCG ACGGCGGATCGGGAAAGCCACTGCACAAGCCAAACGTATCCGACATACTG AAGAAGGAGACGCGCCTGCGATGCCGCTACTGCCACGAGCTGTACAGCGA GGACTTCAATCGGCGGGGCGCCTGCGAATATGCCCCGGATGCGTTTCGCA GCGGCTACGAGTGCATCTCTGGGATGGGCTGTGCCCGTTGCATGATCTAC CACTGCATGAGCGACGCCGAGGGCGAGACGGCCCAGCATCCGTGCGACTG CAGCGCCAGCGAGGCCGGCTGCAGCAAGCGCTGGCTGGGCCTGGCGATCC TCTCGTTGTTCGTGCCCTGCCTGTGGTGCTATCCGCCGCTCCGCGCCTGC CACTTGGCCGGCATCCACTGCGGCCTCTGCGGCGGGCAGCACAAGCCGCA TGTCTGACATTTGGAGGCCCGCTTGCAAGGACAGCACGATGATGACCCCA GGCCCAGAAGCGAATTCCACTACCACCACTCCGAGCAGAGCATAATGAAC AGCGCCAAGCGTCCGTGGGGCGCCAAGCAGAAGCAGTCGCAGCAATCACA GCAATCGCAGCGTCATTTTTACAACTGGGAGCTGTCGCACAGCTTGGGTG CTCCCCAGCATCAGACTCCGCCGTATTTAATGCAATCAACTGGCAGGAAG GCACCGCAGAACGATTACGGACGCTTGCTGTTCTAGGCTTTATCCATGAT GACAGCCTGAGGACTCATTTTTACAAACTGATTACCAAGAAGTACTGATT ATTTCACCAGATCTACGGTATCTTAAAGATATCTAAAAGTGGACAAGGAA ATGTTTTTCTGATAAATGGCAAGAAAACAATGTTTTCACACTGTTGAGAT GAAAAAATCGTGTCGATGCAAAAGCACAGCTTTTTCAAATCGGGTGAAAG AAGAATGCGTAAGAAGCAATTCAGCTTGAAAATCAGTTTGCCAAAATGGG TCTGGGGTTCGATTTTAGTATCATTTCGGTATACTCCATTTGAATTGCCA TAATTAATTGTATATACAAAAGAGCAGGAAGGATTATGTATCTAATTTTA ATATACTTTTAAAATTGTAACTTATGTTTAGTGCTCTCGCTTAATTATAG TTTTGTAAAAACGGGCTATTTGTTTTTATTCGTAACTGAACACACATTTT TTTGAAAAATCAAAATATTATACAATGATTGTTTTAGTTTTAGTTGTTTA GGGTTTTTTGCTATTTTACACTTGCTTGTTTACAATTCGAAATTGGAGAA CAGTATTAAAAGGCCAAGGCGAAGGCAAAGGCGAAACGAGAAAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 10648442..10650082 | 2190..550 | 8190 | 99.9 | Minus |
chr2R | 21145070 | chr2R | 10651344..10651525 | 292..111 | 895 | 99.5 | Minus |
chr2R | 21145070 | chr2R | 10651117..10651285 | 459..291 | 830 | 99.4 | Minus |
chr2R | 21145070 | chr2R | 10655299..10655410 | 112..1 | 560 | 100 | Minus |
chr2R | 21145070 | chr2R | 10650205..10650299 | 549..455 | 460 | 98.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 14761154..14762796 | 2192..550 | 8215 | 100 | Minus |
2R | 25286936 | 2R | 14764058..14764239 | 292..111 | 910 | 100 | Minus |
2R | 25286936 | 2R | 14763831..14763999 | 459..291 | 845 | 100 | Minus |
2R | 25286936 | 2R | 14768004..14768115 | 112..1 | 560 | 100 | Minus |
2R | 25286936 | 2R | 14762919..14763013 | 549..455 | 460 | 98.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 14762353..14763995 | 2192..550 | 8215 | 100 | Minus |
2R | 25260384 | 2R | 14765257..14765438 | 292..111 | 910 | 100 | Minus |
2R | 25260384 | 2R | 14765030..14765198 | 459..291 | 845 | 100 | Minus |
2R | 25260384 | 2R | 14769203..14769314 | 112..1 | 560 | 100 | Minus |
2R | 25260384 | 2R | 14764118..14764212 | 549..455 | 460 | 98.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 10648442..10650082 | 550..2190 | 99 | <- | Minus |
chr2R | 10650205..10650294 | 460..549 | 100 | <- | Minus |
chr2R | 10651117..10651285 | 291..459 | 99 | <- | Minus |
chr2R | 10651346..10651523 | 113..290 | 99 | <- | Minus |
chr2R | 10655299..10655410 | 1..112 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spred-RA | 1..367 | 93..459 | 100 | -> | Plus |
Spred-RA | 434..1281 | 460..1307 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spred-RB | 1..1215 | 93..1307 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spred-RB | 1..1215 | 93..1307 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spred-RA | 401..859 | 1..459 | 100 | -> | Plus |
Spred-RA | 926..2656 | 460..2190 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spred-RB | 336..2525 | 1..2190 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spred-RB | 336..2525 | 1..2190 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14761156..14762796 | 550..2190 | 100 | <- | Minus |
2R | 14762919..14763008 | 460..549 | 100 | <- | Minus |
2R | 14763831..14763999 | 291..459 | 100 | <- | Minus |
2R | 14764060..14764237 | 113..290 | 100 | <- | Minus |
2R | 14768004..14768115 | 1..112 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14761156..14762796 | 550..2190 | 100 | <- | Minus |
2R | 14762919..14763008 | 460..549 | 100 | <- | Minus |
2R | 14763831..14763999 | 291..459 | 100 | <- | Minus |
2R | 14764060..14764237 | 113..290 | 100 | <- | Minus |
2R | 14768004..14768115 | 1..112 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14761156..14762796 | 550..2190 | 100 | <- | Minus |
2R | 14762919..14763008 | 460..549 | 100 | <- | Minus |
2R | 14763831..14763999 | 291..459 | 100 | <- | Minus |
2R | 14764060..14764237 | 113..290 | 100 | <- | Minus |
2R | 14768004..14768115 | 1..112 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 10648661..10650301 | 550..2190 | 100 | <- | Minus |
arm_2R | 10650424..10650513 | 460..549 | 100 | <- | Minus |
arm_2R | 10651336..10651504 | 291..459 | 100 | <- | Minus |
arm_2R | 10651565..10651742 | 113..290 | 100 | <- | Minus |
arm_2R | 10655509..10655620 | 1..112 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14762355..14763995 | 550..2190 | 100 | <- | Minus |
2R | 14764118..14764207 | 460..549 | 100 | <- | Minus |
2R | 14765030..14765198 | 291..459 | 100 | <- | Minus |
2R | 14765259..14765436 | 113..290 | 100 | <- | Minus |
2R | 14769203..14769314 | 1..112 | 100 | Minus |
Translation from 92 to 1306
> LD31195.hyp MTEGHESDFLVTVRAQVMTRDESTEGWLPLAGGGLANVSIRKRARLSPLA SGHDYIIYGQRISDQSVILSCVINRDLKYYKVMPTFHHWRAGKQRNGLTF QTAADARAFDKGVLRAYNELIDDDVFMTLDLPVESESLQKIHSSPEGSEK SHKSVSNNSDSEKLPPPPIHYISTDKTSATTSPPDAPPASAAPSPATAGQ IAASENYSYVTLTAVHHDYNYPVVDQPVGAQVLNARRESISALKKRNALE AAQAMAAAQTAAGGGLACRDGGSGKPLHKPNVSDILKKETRLRCRYCHEL YSEDFNRRGACEYAPDAFRSGYECISGMGCARCMIYHCMSDAEGETAQHP CDCSASEAGCSKRWLGLAILSLFVPCLWCYPPLRACHLAGIHCGLCGGQH KPHV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Spred-PB | 404 | CG10155-PB | 1..404 | 1..404 | 2166 | 100 | Plus |
Spred-PA | 426 | CG10155-PA | 1..426 | 1..404 | 2133 | 94.8 | Plus |
Spred-PC | 519 | CG10155-PC | 1..426 | 1..404 | 2133 | 94.8 | Plus |
Translation from 92 to 1306
> LD31195.pep MTEGHESDFLVTVRAQVMTRDESTEGWLPLAGGGLANVSIRKRARLSPLA SGHDYIIYGQRISDQSVILSCVINRDLKYYKVMPTFHHWRAGKQRNGLTF QTAADARAFDKGVLRAYNELIDDDVFMTLDLPVESESLQKIHSSPEGSEK SHKSVSNNSDSEKLPPPPIHYISTDKTSATTSPPDAPPASAAPSPATAGQ IAASENYSYVTLTAVHHDYNYPVVDQPVGAQVLNARRESISALKKRNALE AAQAMAAAQTAAGGGLACRDGGSGKPLHKPNVSDILKKETRLRCRYCHEL YSEDFNRRGACEYAPDAFRSGYECISGMGCARCMIYHCMSDAEGETAQHP CDCSASEAGCSKRWLGLAILSLFVPCLWCYPPLRACHLAGIHCGLCGGQH KPHV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13513-PA | 529 | GF13513-PA | 1..429 | 1..403 | 1794 | 90.2 | Plus |
Dana\GF11575-PA | 818 | GF11575-PA | 147..252 | 10..120 | 159 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22399-PA | 426 | GG22399-PA | 1..426 | 1..404 | 2127 | 94.1 | Plus |
Dere\GG21948-PA | 834 | GG21948-PA | 153..258 | 10..120 | 158 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21145-PA | 514 | GH21145-PA | 1..411 | 1..390 | 1716 | 81 | Plus |
Dgri\GH22638-PA | 830 | GH22638-PA | 154..259 | 10..120 | 161 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Spred-PB | 404 | CG10155-PB | 1..404 | 1..404 | 2166 | 100 | Plus |
Spred-PC | 519 | CG10155-PC | 1..426 | 1..404 | 2133 | 94.8 | Plus |
Spred-PA | 426 | CG10155-PA | 1..426 | 1..404 | 2133 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18744-PA | 434 | GI18744-PA | 1..434 | 1..404 | 1775 | 81.6 | Plus |
Dmoj\GI18914-PA | 553 | GI18914-PA | 167..272 | 10..120 | 163 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10623-PA | 421 | GL10623-PA | 1..421 | 1..404 | 1744 | 84.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10117-PA | 421 | GA10117-PA | 1..421 | 1..404 | 1749 | 84.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20184-PA | 426 | GM20184-PA | 1..426 | 1..404 | 2124 | 94.1 | Plus |
Dsec\GM21935-PA | 819 | GM21935-PA | 150..255 | 10..120 | 158 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25657-PA | 426 | GD25657-PA | 1..426 | 1..404 | 2140 | 94.8 | Plus |
Dsim\GD11431-PA | 684 | GD11431-PA | 6..111 | 10..120 | 157 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21766-PA | 431 | GJ21766-PA | 1..431 | 1..404 | 1786 | 82.4 | Plus |
Dvir\GJ19769-PA | 816 | GJ19769-PA | 154..259 | 10..120 | 162 | 29.5 | Plus |