BDGP Sequence Production Resources |
Search the DGRC for LD31216
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 312 |
Well: | 16 |
Vector: | pOT2 |
Associated Gene/Transcript | CG12007-RA |
Protein status: | LD31216.pep: gold |
Preliminary Size: | 1988 |
Sequenced Size: | 1822 |
Gene | Date | Evidence |
---|---|---|
CG12007 | 2001-09-19 | Blastp of sequenced clone |
CG12007 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12007 | 2008-04-29 | Release 5.5 accounting |
CG12007 | 2008-08-15 | Release 5.9 accounting |
CG12007 | 2008-12-18 | 5.12 accounting |
1822 bp (1822 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058618
> LD31216.complete AATATTGGACTTTAATTCAATTCAGGGCAATGCACGGACGCGTAAAAGTG AGGACCACGGAGGAGGAGCGCGAGCGGAAGAAGAAGGAGCAGGCTCTGAA AGTCCGGGCCTACCGTGCAGCCATGGGAAGGATTCAGAAGAAGAGGGAGG CGGGTGAGCTGGACAACGAAATGCTCAGCCTGACAGTTCAGATCTTGCTG CGGAATCCGGATGTCAGCATGCTGTGGAACATCCGCAGGGAGTGCGTGCT GGAGAAGCTGTTCAGGCTAAAGGAAGAGGAGGCCACGTGCGAGACGCCCA GCGAGGAGAAGCCAGAGAAGGAAAACCAAACCGGTGAGAATAAGCCGAGT GAAAAGAAGGCCGCTGGCGAGGACAAGGCCCATTCCATTTTCACCTGCGA ACTGGACCTCACCGAGCAGTGCCTAATGGTCAACCCGAAGTCCTACAACG CCTGGCACCACCGCTGCTGGACCCTGGAACAGAATCCCAGGGCGGACTGG CAGCAGGAGGTGAAACTGTGCAACAAGTACCTCAAATTCGACGAGCGCAA CTTCCACACCTGGGACTACAGGCGCTATGTGACCGGCAAGGCCATGGTGC CGGCCACCCAGGAGCTGGACTTCTGCACCGAGAAGATCAGGGCTAACTTC TCCAACTACTCCAGCTGGCACCACCGCAGTCTCCTGCTTCCGGAGCTCTA CCCCAACCAGCAGAGAGACCGGCCCATGAGTGAGGAGAAGTTGCAGAAGG AGCTTGAAATGGTGCTGACCGCTGCTTTCACGGATCCTAACGACAGCAGT GCTTGGTTCTACCAGCGCTGGTTGCTGGGCAGCGGCGCCCAGTTGGATCG GGCTCCAAGGATAGCTGCTTTTCGACTGGAGTCACATGGAGCAGTCCTCG CCCTTGACAAGCCCTACCCAGATATAAAGCAATTGAAGACTGAGCTAGTT GGGGGAGGACAAACGATTTTACTGGAGTTCTGGCTACCAGTGGACAAGCG TGGAACCAGTTGGAAGTGTCAGCAGAACTTCGATTACCAAAGAAACTCAG CTTACTCCCTTAGGCTCTCCGATCAGAAGGTTGACCTCTCGCCTCTGTCT GGCTCGGAAAACGGAGCCTATTACATTGCGCCGCCACACGGCACTACGAG TTGCAGCAAGGATCTCCTGGCGGAGCTGCAAACGCAGCTGCAATCCTGCC TAGATCTTCTGGAGTTTGAGCCGGACAGCAAGTGGACCCTACTAACAAGT GCCCTTCTAATGCGTGCTATCGATTTCTCAGCCAATCACGAAACGAGCTT GGCGCACTTGGCCAAGTTGGAAAAGGTGGATTTTTTAAGAGAGGGTTACT ACAAGGACCTCGCTGCTAGGTGGACCTTGGAGTGGGAGCTTGCCAAGTGG CCCCAATCGGCCGACTTTCCCAAAAGATTTGACATAGCGAATGCCGTACT GCTGGAATCGCTTCCTTATGATCAATACTTAGTCATCGCTGATGAAATAA CCTTGCCCAACAAACTGCGAGACAAATTGGGGGAATCAGTGCCCAAAACG TTTGCAGACTTGAAGTTGCAGTCATAGACCATTGGTGAATTGGTTTCGAT AAGATAAGCCATATTTTACATTTGGTGCTGAACCGTTTTTGGTGATGTTG AAAGCCTTGAAAGAAGTGCAATCAATCGCTAAATTCCATTTTGAAATTAT TCCTATTTATTCCTTGTACGAGTATGAGAAGAAATGTTATGTACATTACT AATACATATTTTTACTCTCTTTGTATATCGATGTGCAAATATACGAATAG TAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12007-RA | 1856 | CG12007-RA | 52..1856 | 1..1805 | 9025 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 953809..955609 | 1..1801 | 9005 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 5128139..5129943 | 1..1805 | 9025 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 4868970..4870774 | 1..1805 | 9025 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 953809..955609 | 1..1801 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12007-RA | 1..1548 | 30..1577 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12007-RA | 1..1548 | 30..1577 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12007-RA | 1..1548 | 30..1577 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12007-RA | 1..1548 | 30..1577 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12007-RA | 1..1548 | 30..1577 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12007-RA | 52..1852 | 1..1801 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12007-RA | 52..1852 | 1..1801 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12007-RA | 53..1853 | 1..1801 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12007-RA | 52..1852 | 1..1801 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12007-RA | 53..1853 | 1..1801 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5128139..5129939 | 1..1801 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5128139..5129939 | 1..1801 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5128139..5129939 | 1..1801 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 953861..955661 | 1..1801 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4868970..4870770 | 1..1801 | 100 | Plus |
Translation from 2 to 1576
> LD31216.hyp YWTLIQFRAMHGRVKVRTTEEERERKKKEQALKVRAYRAAMGRIQKKREA GELDNEMLSLTVQILLRNPDVSMLWNIRRECVLEKLFRLKEEEATCETPS EEKPEKENQTGENKPSEKKAAGEDKAHSIFTCELDLTEQCLMVNPKSYNA WHHRCWTLEQNPRADWQQEVKLCNKYLKFDERNFHTWDYRRYVTGKAMVP ATQELDFCTEKIRANFSNYSSWHHRSLLLPELYPNQQRDRPMSEEKLQKE LEMVLTAAFTDPNDSSAWFYQRWLLGSGAQLDRAPRIAAFRLESHGAVLA LDKPYPDIKQLKTELVGGGQTILLEFWLPVDKRGTSWKCQQNFDYQRNSA YSLRLSDQKVDLSPLSGSENGAYYIAPPHGTTSCSKDLLAELQTQLQSCL DLLEFEPDSKWTLLTSALLMRAIDFSANHETSLAHLAKLEKVDFLREGYY KDLAARWTLEWELAKWPQSADFPKRFDIANAVLLESLPYDQYLVIADEIT LPNKLRDKLGESVPKTFADLKLQS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12007-PA | 515 | CG12007-PA | 1..515 | 10..524 | 2728 | 100 | Plus |
Translation from 29 to 1576
> LD31216.pep MHGRVKVRTTEEERERKKKEQALKVRAYRAAMGRIQKKREAGELDNEMLS LTVQILLRNPDVSMLWNIRRECVLEKLFRLKEEEATCETPSEEKPEKENQ TGENKPSEKKAAGEDKAHSIFTCELDLTEQCLMVNPKSYNAWHHRCWTLE QNPRADWQQEVKLCNKYLKFDERNFHTWDYRRYVTGKAMVPATQELDFCT EKIRANFSNYSSWHHRSLLLPELYPNQQRDRPMSEEKLQKELEMVLTAAF TDPNDSSAWFYQRWLLGSGAQLDRAPRIAAFRLESHGAVLALDKPYPDIK QLKTELVGGGQTILLEFWLPVDKRGTSWKCQQNFDYQRNSAYSLRLSDQK VDLSPLSGSENGAYYIAPPHGTTSCSKDLLAELQTQLQSCLDLLEFEPDS KWTLLTSALLMRAIDFSANHETSLAHLAKLEKVDFLREGYYKDLAARWTL EWELAKWPQSADFPKRFDIANAVLLESLPYDQYLVIADEITLPNKLRDKL GESVPKTFADLKLQS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18924-PA | 508 | GF18924-PA | 1..508 | 1..513 | 1878 | 73.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12615-PA | 512 | GG12615-PA | 1..512 | 1..515 | 2356 | 88.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17686-PA | 502 | GH17686-PA | 1..498 | 1..490 | 1506 | 61.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12007-PA | 515 | CG12007-PA | 1..515 | 1..515 | 2728 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22537-PA | 489 | GI22537-PA | 1..488 | 1..491 | 1636 | 64.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21629-PA | 507 | GL21629-PA | 1..506 | 1..514 | 1824 | 69.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11330-PA | 507 | GA11330-PA | 1..506 | 1..514 | 1799 | 69.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10787-PA | 515 | GM10787-PA | 1..515 | 1..515 | 2542 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19760-PA | 511 | GD19760-PA | 1..511 | 1..515 | 2484 | 93.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10140-PA | 512 | GJ10140-PA | 1..511 | 1..491 | 1619 | 63.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12957-PA | 516 | GK12957-PA | 1..516 | 1..513 | 1647 | 64.8 | Plus |