BDGP Sequence Production Resources |
Search the DGRC for LD31286
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 312 |
Well: | 86 |
Vector: | pOT2 |
Associated Gene/Transcript | RpS6-RA |
Protein status: | LD31286.pep: gold |
Preliminary Size: | 3346 |
Sequenced Size: | 1146 |
Gene | Date | Evidence |
---|---|---|
CG10944 | 2001-01-01 | Release 2 assignment |
CG10944 | 2001-09-19 | Blastp of sequenced clone |
RpS6 | 2008-04-29 | Release 5.5 accounting |
RpS6 | 2008-08-15 | Release 5.9 accounting |
RpS6 | 2008-12-18 | 5.12 accounting |
1146 bp (1146 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058620
> LD31286.complete AACAGACCGACAATATGAAGGTGTGCTAAAAATTTGTGATAATACTGATA TAAATTATATCAATTTGTGAAATATTGCGAAAATGCTAAAGCGCAAGCAT TGGCGCGGTGATCAAACAAATTGCAAGCGAAAATGTCCAGTGATTGCGTT AAAATAAGTGGATGATATTATCTCCGCTGCAATTCGACTTAATATACATT TATATGTATGTTTATGCATTGTGTGTGACTTTTTTTTTTGCATTGTGTGT TCCAGCTCAACGTTTCCTATCCCGCGACGGGATGCCAAAAGCTATTCGAA GTGGTCGACGAGCACAAGCTGCGCGTCTTCTACGAGAAGCGTATGGGACA GGTTGTGGAGGCCGATATCCTCGGTGACGAGTGGAAGGGCTACCAGCTGC GCATCGCCGGCGGCAACGACAAGCAGGGATTCCCCATGAAGCAGGGTGTC TTGACCCACGGCCGTGTGCGTCTGCTCCTGAAGAAGGGACACTCCTGCTA CCGTCCACGCCGCACTGGCGAGCGTAAGCGCAAGTCTGTGCGTGGATGCA TCGTGGACGCCAACATGTCTGTGCTGGCTCTGGTCGTCTTGAAGAAGGGT GAGAAGGACATTCCCGGTCTCACCGACACCACCATCCCACGTCGCCTGGG ACCCAAGCGTGCTAGCAAGATCCGCAAGCTCTACAACTTGAGCAAGGAAG ATGATGTGCGTCGCTTCGTTGTGCGTCGCCCTTTGCCCGCCAAGGACAAC AAGAAGGCCACCTCCAAGGCCCCCAAAATTCAGCGCCTGATCACCCCCGT TGTGCTGCAGCGCAAGCACCGTCGCATTGCGCTGAAGAAGAAGCGCCAGA TCGCTTCCAAGGAGGCTTCCGCCGACTACGCCAAGCTGTTGGTGCAGCGC AAGAAGGAGTCCAAGGCCAAGCGCGAGGAGGCCAAGCGCCGCCGTTCTGC CTCCATTCGCGAGTCCAAGAGCTCTGTCTCCAGCGACAAGAAGTAAACAC CGCGACACGGAACCCACATTCTTCGTTTAAGCAGAAACTGAACGTTGATC ACAACCAAATGATCCACGAGAGGAGAAATAAAACTTTGTAACCATTTATG TTAAATAAACGCGATAAATGGTATAGAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpS6-RA | 1228 | RpS6-RA | 99..1226 | 1..1128 | 5640 | 100 | Plus |
RpS6-RB | 1164 | RpS6-RB | 133..1007 | 254..1128 | 4375 | 100 | Plus |
DMG8-chrX.14.011.b | 703 | DMG8-chrX.14.011.b | 378..504 | 929..1054 | 370 | 87.4 | Plus |
DMG8-chrX.14.011.b | 703 | DMG8-chrX.14.011.b | 300..389 | 836..925 | 270 | 86.6 | Plus |
DMG8-chrX.14.011.b | 703 | DMG8-chrX.14.011.b | 65..187 | 475..597 | 195 | 77.2 | Plus |
DMG8-chrX.14.011.b | 703 | DMG8-chrX.14.011.b | 505..544 | 1089..1128 | 185 | 97.5 | Plus |
DMG8-chrX.14.011.b | 703 | DMG8-chrX.14.011.b | 196..266 | 636..706 | 175 | 83 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 7791523..7792189 | 1126..460 | 3320 | 99.9 | Minus |
chrX | 22417052 | chrX | 7792701..7793161 | 461..1 | 2305 | 100 | Minus |
chrX | 22417052 | chrX | 7789185..7789389 | 1054..836 | 415 | 81.4 | Minus |
chrX | 22417052 | chrX | 7790375..7790579 | 1054..836 | 415 | 81.4 | Minus |
chrX | 22417052 | chrX | 7789502..7789624 | 597..475 | 195 | 77.2 | Minus |
chrX | 22417052 | chrX | 7790692..7790814 | 597..475 | 195 | 77.2 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
snoRNA:Or-aca2-RA | 142 | CR34593-RA | 1..142 | 60..201 | 710 | 100 | Plus |
CR11386-RB | 429 | CR11386-RB | 284..373 | 836..925 | 270 | 86.6 | Plus |
CR11386-RB | 429 | CR11386-RB | 49..171 | 475..597 | 195 | 77.2 | Plus |
CR11386-RB | 429 | CR11386-RB | 362..429 | 929..996 | 175 | 83.8 | Plus |
CR11386-RB | 429 | CR11386-RB | 180..250 | 636..706 | 175 | 83 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 7899622..7900290 | 1128..460 | 3345 | 100 | Minus |
X | 23542271 | X | 7900802..7901262 | 461..1 | 2305 | 100 | Minus |
X | 23542271 | X | 7897286..7897490 | 1054..836 | 415 | 81.4 | Minus |
X | 23542271 | X | 7898476..7898680 | 1054..836 | 415 | 81.4 | Minus |
X | 23542271 | X | 7897603..7897725 | 597..475 | 195 | 77.2 | Minus |
X | 23542271 | X | 7898793..7898915 | 597..475 | 195 | 77.2 | Minus |
X | 23542271 | X | 7897246..7897285 | 1128..1089 | 185 | 97.5 | Minus |
X | 23542271 | X | 7898436..7898475 | 1128..1089 | 185 | 97.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 7907720..7908388 | 1128..460 | 3345 | 100 | Minus |
X | 23527363 | X | 7908900..7909360 | 461..1 | 2305 | 100 | Minus |
X | 23527363 | X | 7906574..7906700 | 1054..929 | 370 | 87.4 | Minus |
X | 23527363 | X | 7905384..7905510 | 1054..929 | 370 | 87.4 | Minus |
X | 23527363 | X | 7906689..7906778 | 925..836 | 270 | 86.6 | Minus |
X | 23527363 | X | 7905499..7905588 | 925..836 | 270 | 86.6 | Minus |
X | 23527363 | X | 7906891..7907013 | 597..475 | 195 | 77.2 | Minus |
X | 23527363 | X | 7905701..7905823 | 597..475 | 195 | 77.2 | Minus |
X | 23527363 | X | 7905344..7905383 | 1128..1089 | 185 | 97.5 | Minus |
X | 23527363 | X | 7906534..7906573 | 1128..1089 | 185 | 97.5 | Minus |
X | 23527363 | X | 7905622..7905692 | 706..636 | 175 | 83 | Minus |
X | 23527363 | X | 7906812..7906882 | 706..636 | 175 | 83 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 7791523..7792188 | 461..1126 | 99 | <- | Minus |
chrX | 7792702..7793161 | 1..460 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS6-RB | 2..747 | 251..996 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS6-RB | 2..747 | 251..996 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS6-RB | 2..747 | 251..996 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS6-RB | 2..747 | 251..996 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS6-RB | 2..747 | 251..996 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
snoRNA:Or-aca2-RA | 1..142 | 60..201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS6-RA | 1..1126 | 1..1126 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS6-RA | 1..1126 | 1..1126 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS6-RA | 70..1195 | 1..1126 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS6-RA | 1..1126 | 1..1126 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS6-RA | 70..1195 | 1..1126 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7899624..7900289 | 461..1126 | 100 | <- | Minus |
X | 7900803..7901262 | 1..460 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7899624..7900289 | 461..1126 | 100 | <- | Minus |
X | 7900803..7901262 | 1..460 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7899624..7900289 | 461..1126 | 100 | <- | Minus |
X | 7900803..7901262 | 1..460 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 7793657..7794322 | 461..1126 | 100 | <- | Minus |
arm_X | 7794836..7795295 | 1..460 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7907722..7908387 | 461..1126 | 100 | <- | Minus |
X | 7908901..7909360 | 1..460 | 100 | Minus |
Translation from 342 to 995
> LD31286.hyp MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGH SCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPR RLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPAKDNKKATSKAPKIQRLI TPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREEAKRR RSASIRESKSSVSSDKK*
Translation from 342 to 995
> LD31286.pep MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGH SCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPR RLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPAKDNKKATSKAPKIQRLI TPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREEAKRR RSASIRESKSSVSSDKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21093-PA | 248 | GF21093-PA | 32..248 | 1..217 | 1078 | 96.3 | Plus |
Dana\GF10419-PA | 249 | GF10419-PA | 32..226 | 1..195 | 802 | 78.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17600-PA | 222 | GG17600-PA | 32..222 | 1..217 | 928 | 86.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24620-PA | 248 | GH24620-PA | 32..238 | 1..207 | 1016 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpS6-PA | 217 | CG10944-PA | 1..217 | 1..217 | 1087 | 100 | Plus |
RpS6-PB | 248 | CG10944-PB | 32..248 | 1..217 | 1087 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11119-PA | 248 | GI11119-PA | 32..238 | 1..207 | 1007 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18222-PA | 236 | GL18222-PA | 20..226 | 1..207 | 1032 | 96.6 | Plus |
Dper\GL17130-PA | 218 | GL17130-PA | 32..204 | 1..198 | 540 | 61.6 | Plus |
Dper\GL25484-PA | 61 | GL25484-PA | 2..49 | 100..147 | 197 | 81.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10657-PA | 248 | GA10657-PA | 32..238 | 1..207 | 1032 | 96.6 | Plus |
Dpse\GA23494-PA | 243 | GA23494-PA | 32..229 | 1..198 | 676 | 70.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11965-PA | 246 | GM11965-PA | 32..236 | 1..207 | 807 | 82.1 | Plus |
Dsec\GM11553-PA | 144 | GM11553-PA | 5..144 | 32..217 | 334 | 51.1 | Plus |
Dsec\GM11558-PA | 144 | GM11558-PA | 5..144 | 32..217 | 334 | 51.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16145-PA | 248 | GD16145-PA | 32..248 | 1..217 | 1104 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15976-PA | 248 | GJ15976-PA | 32..248 | 1..217 | 1079 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25015-PA | 248 | GK25015-PA | 32..238 | 1..207 | 1031 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\RpS6-PA | 222 | GE17500-PA | 32..222 | 1..217 | 928 | 86.2 | Plus |