BDGP Sequence Production Resources |
Search the DGRC for LD31570
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 315 |
Well: | 70 |
Vector: | pOT2 |
Associated Gene/Transcript | por-RA |
Protein status: | LD31570.pep: gold |
Preliminary Size: | 2157 |
Sequenced Size: | 1868 |
Gene | Date | Evidence |
---|---|---|
CG6205 | 2001-01-01 | Release 2 assignment |
CG6205 | 2001-11-29 | Blastp of sequenced clone |
CG6205 | 2003-01-01 | Sim4 clustering to Release 3 |
por | 2008-04-29 | Release 5.5 accounting |
por | 2008-08-15 | Release 5.9 accounting |
por | 2008-12-18 | 5.12 accounting |
1868 bp (1868 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069578
> LD31570.complete CTCGGATTTCCGGGTTTTTCCTTGATTCCCCCGGATTGTATTGGCTTTGG GCGGCCGGCGATGGACTACCAGTACTTCGAGGAGGAATCGGACTACATTG ATCTGGACGAGGAGGAGGAGGATGACGACGTGGTGACAGCCGGCAGCTTG GACCACAGATTTGGGCAGCCAAACGGCGAGGAGGACTATTATTTCGGCGG GGACGATGTGGAGGAGGAGCTGGTGGTAGATGGACACGGTGTCCTGGAGC TGGCCGGGCGCCTACTCGAGAGCCTGCAGAGCTGCGTGCAGCCATCTGTG CTGCAGGTCATGCAGTATGTGGCGCCCATGCTGCTCCTCTGCCTCCTGTG CCGCCTGCTGTGCCTCCTCTACTCGCAGCGCAGACGCCTCACCAGCCTGG CACCGCTGCATTTGTTCCACTTCGCCTGCGGCTTGATTATACTGCAGATC ACGGTGGGCTACCGACTGCTCCTACTTCTCCTGCTGGCCGCCGTGGGCTA CCTGCTGCTCCAGCTATTGCGACTGGGACGAAGAGGAGCTCAAGTTCTGG CCGTTCTAACCGTGGGCAGCCAGTTCCTGTACGAACTGCTCATTTGGCGG CGGCGCAGTGACTGGCCACAGCTGCGCGGCATCCAGATGGTGGTCAATAT GAAGCTTATCTCGCTGGGCTTCGACCTGACCGCCAGTGGGCAGCTGCAGG CGAGGATTCCGGGTCCGTTTGCCTACCTGGGCTACATCTACAGTCCGGCC ACCTGCGCCTTGGGGCCCTGGGTGAGCTTCGGCTGCTACATGGACTGTCT GGTGCCACGGAATAGCTGGCTGGTCAGCCTGCGTCGCCTCTTGCCCAACG TGGTGATCTGCGTGCTGGCCGTGACCGTGTCCAATTGCGTGGCTCCGGCG CTGAGTGACTTCTTCGGGGATAGCTCGCACTTCCTGGTCATGTACTGGGA CGCACTGAGTGTGCGCAGCAGCCACTACTTTGTGGGCATGATGGCGCAGG CGCTGCTGGTAGCCTCCGATCAGCGACTGGACGGTGCCACCAAGGAGTCG GACATGCTGGGTCCGTTGATCTCGCAGCCCTGGCGCATCGAGTGGCCGCG CTCGATCAGCTCATTGGTCCGGAGCTGGAACATTCCCATGCACGAGTGGC TCAAACGGTACATCTACGCGCCCTGCAAGCCCACCGCGTCCACCTCGAGG GGACGCATCCTGGTGGTCGTGCTCTCCACCTATCTGGTGTCCAGCCTGCT GCACGGCATGGATCTGCGCATCTATCTGGTGCTCATCTCGCTGGCGTTCC TAGCCGAGGGTGAATCGCTGCTCAGGCGGCAGCTCGCCAGCCTCCTGAAT GCCTGCATCACTGCCAATCTGTGTCCGGGCAAGGAACGATGTCGGTATAG CCACTGCCCGAGCAAACGGCGATTGAACTCCCTGTCCTACTGGCTGGCGA GGCTCACTAATCTGGCATTCACGGCGCTGGCCATCTTCCACCTGGCCTAT CTGGGCGTCGTGCTGCTGGGCGATGACCTGGAAGTCGGCGAGGATGGCGA CTCCTTCCTGTGGCACTGGCAGCAGGCTGGCTATCTCAGCCACTACATCG GTTTGGGCACCTTCGTCCTTTACCTGTTCATCTCGTAGACTCCGCAGGAT CTTGCCGTCGCCAATACTCACTATGACTGATCTACACGTATTTATATTTG TAATCCCAAGCGTATATGCGCTTGTACTTTTTGTATCTTGTATCTATCTA TTCGTATCTTGTAGTCTGTGTGCTGTGTGAGTACTTAATATTAAAGCATT CTGTGAAACGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAA AAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
por-RA | 2333 | por-RA | 39..1848 | 1..1810 | 9050 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 18267189..18269001 | 1810..1 | 8730 | 98.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 18378004..18379813 | 1810..1 | 9050 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 18386102..18387911 | 1810..1 | 9050 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 18267189..18269001 | 1..1810 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
por-RA | 1..1578 | 61..1638 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
por-RA | 1..1578 | 61..1638 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
por-RA | 1..1578 | 61..1638 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
por-RA | 1..1578 | 61..1638 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
por-RA | 1..1578 | 61..1638 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
por-RA | 39..1848 | 1..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
por-RA | 39..1848 | 1..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
por-RA | 39..1848 | 1..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
por-RA | 39..1848 | 1..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
por-RA | 39..1848 | 1..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18378004..18379813 | 1..1810 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18378004..18379813 | 1..1810 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18378004..18379813 | 1..1810 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 18272037..18273846 | 1..1810 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18386102..18387911 | 1..1810 | 100 | Minus |
Translation from 0 to 1637
> LD31570.hyp LGFPGFSLIPPDCIGFGRPAMDYQYFEEESDYIDLDEEEEDDDVVTAGSL DHRFGQPNGEEDYYFGGDDVEEELVVDGHGVLELAGRLLESLQSCVQPSV LQVMQYVAPMLLLCLLCRLLCLLYSQRRRLTSLAPLHLFHFACGLIILQI TVGYRLLLLLLLAAVGYLLLQLLRLGRRGAQVLAVLTVGSQFLYELLIWR RRSDWPQLRGIQMVVNMKLISLGFDLTASGQLQARIPGPFAYLGYIYSPA TCALGPWVSFGCYMDCLVPRNSWLVSLRRLLPNVVICVLAVTVSNCVAPA LSDFFGDSSHFLVMYWDALSVRSSHYFVGMMAQALLVASDQRLDGATKES DMLGPLISQPWRIEWPRSISSLVRSWNIPMHEWLKRYIYAPCKPTASTSR GRILVVVLSTYLVSSLLHGMDLRIYLVLISLAFLAEGESLLRRQLASLLN ACITANLCPGKERCRYSHCPSKRRLNSLSYWLARLTNLAFTALAIFHLAY LGVVLLGDDLEVGEDGDSFLWHWQQAGYLSHYIGLGTFVLYLFIS*
Translation from 60 to 1637
> LD31570.pep MDYQYFEEESDYIDLDEEEEDDDVVTAGSLDHRFGQPNGEEDYYFGGDDV EEELVVDGHGVLELAGRLLESLQSCVQPSVLQVMQYVAPMLLLCLLCRLL CLLYSQRRRLTSLAPLHLFHFACGLIILQITVGYRLLLLLLLAAVGYLLL QLLRLGRRGAQVLAVLTVGSQFLYELLIWRRRSDWPQLRGIQMVVNMKLI SLGFDLTASGQLQARIPGPFAYLGYIYSPATCALGPWVSFGCYMDCLVPR NSWLVSLRRLLPNVVICVLAVTVSNCVAPALSDFFGDSSHFLVMYWDALS VRSSHYFVGMMAQALLVASDQRLDGATKESDMLGPLISQPWRIEWPRSIS SLVRSWNIPMHEWLKRYIYAPCKPTASTSRGRILVVVLSTYLVSSLLHGM DLRIYLVLISLAFLAEGESLLRRQLASLLNACITANLCPGKERCRYSHCP SKRRLNSLSYWLARLTNLAFTALAIFHLAYLGVVLLGDDLEVGEDGDSFL WHWQQAGYLSHYIGLGTFVLYLFIS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22511-PA | 517 | GF22511-PA | 1..517 | 1..525 | 1658 | 62.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18128-PA | 524 | GG18128-PA | 1..524 | 1..525 | 2187 | 90.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17785-PA | 347 | GH17785-PA | 1..264 | 1..267 | 580 | 46.4 | Plus |
Dgri\GH17785-PA | 347 | GH17785-PA | 268..347 | 439..525 | 191 | 51.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
por-PC | 525 | CG6205-PC | 1..525 | 1..525 | 2738 | 100 | Plus |
por-PB | 525 | CG6205-PB | 1..525 | 1..525 | 2738 | 100 | Plus |
por-PA | 525 | CG6205-PA | 1..525 | 1..525 | 2738 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15128-PA | 552 | GI15128-PA | 1..552 | 1..525 | 1237 | 50.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27041-PA | 533 | GL27041-PA | 1..533 | 1..525 | 1424 | 55.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19439-PA | 533 | GA19439-PA | 1..533 | 1..525 | 1424 | 55.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22821-PA | 525 | GM22821-PA | 1..525 | 1..525 | 2311 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15644-PA | 296 | GD15644-PA | 1..213 | 1..213 | 748 | 96.7 | Plus |
Dsim\GD15644-PA | 296 | GD15644-PA | 213..296 | 442..525 | 348 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18984-PA | 530 | GJ18984-PA | 1..530 | 1..525 | 1250 | 52.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20006-PA | 534 | GK20006-PA | 1..534 | 1..525 | 1310 | 51.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15535-PA | 525 | GE15535-PA | 1..525 | 1..525 | 2233 | 92 | Plus |