BDGP Sequence Production Resources |
Search the DGRC for LD31571
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 315 |
Well: | 71 |
Vector: | pOT2 |
Associated Gene/Transcript | mRpL1-RA |
Protein status: | LD31571.pep: gold |
Preliminary Size: | 1408 |
Sequenced Size: | 1225 |
Gene | Date | Evidence |
---|---|---|
CG7494 | 2001-01-01 | Release 2 assignment |
CG7494 | 2001-07-04 | Blastp of sequenced clone |
CG7494 | 2003-01-01 | Sim4 clustering to Release 3 |
mRpL1 | 2008-04-29 | Release 5.5 accounting |
mRpL1 | 2008-08-15 | Release 5.9 accounting |
mRpL1 | 2008-12-18 | 5.12 accounting |
1225 bp (1225 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051800
> LD31571.complete TTATGCAAAGCGAGAGGTTTGCATTCCAGTAAATAGTAATATTTCTGAAA GAAATGCAGTCCATTCTGTCTTCAATGAGGGCACTGGCCCTGCGCCAGAG CACGGTGGAGCCCCTCCGCCTGCTGCATCTTTCCGCCGTGAGCGAGGCGG CCCGTAAAGGAACTCGGGAGAAGGCCCGCAAGAAGAAAGTCAAGGTGGAA GTGAAGAAGGTTGGATTCATCCCGCACAACCAGCGCAACAAGAAAATCAA TGTGAAACGGGCGGACAAACATGTGGATGACTCCTGGAAACAGGTGCCCA AAGATGACTGCTATGTGGGGCGCTACTACCGCTGGCCAGTGTACTCGGTG CAGGAAGCTATCCAGTGCCATCGGGAGACGCATCATCCCAGCATGTACAA CGTACCCAATGCTCCCCTCAATTTGGATATTGAACTCAACATGCAGGCGG AGAAGATCACACGTTTTGTGGATAACTTCCAGCGCATGGCCATGATTCCA CACAAGTTTGACCACGGCGAGGAGCGGAAGATCATAGTTTTCACCAAGGG AAATAATGAAGTCCTGGAGGCCAGGGAAGCTGGCGCCTCGCTAGTCGGCG GCGTGGAGCTCATTAAGGATATTACCAGCGGCGAGCTGCTGCTCTCCGAC TACCAGTACGTCATTGCCCATCCGAATATACTGGCCGAGCTGGTGGCCCT GCGAGGCCTGATGAAACGCAAGTTCCCAAATCCAAAGAGCGAGACGCTGG GCACCAACCTGGCCGAGATGATCGTCAAATTCTCCAGCGGCATTAGTTAC AGTGCAGCCAAGGATGAGTACCAGCAAAACTTTGGCCTGATCACCGCCAG TGTGGGCACTTTGGACATGGATGTCCAGAAGCTTGAGGAGAACATCAAGT TCCTACTGCAGGATATTAACACTATGAGGCCCAAGCGCGAGGGACGTTTC ATTACACGTGTCCTGCTGAAGAGCCCGCCAAGCAGTGAGCAGCTGAAAAT CGATCCCTTTGTCTACGTTCCAGAGATGTGGGACAAGAGCACGGCGAAGG TGAAAAGGGATGGGGCCAAGAAGCAGACAGAGCCGGCGGAACCCCAAGAA GCAGTTGCCTCCAATTAGTTAAAACAGAAGCCTATGTATTTTTGTTGATG GATTGTTTGTGCATACTTTAAACTTACATCTCCTAGAGTCCTAAACAGTC TAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 4128144..4128790 | 555..1201 | 3235 | 100 | Plus |
chr3R | 27901430 | chr3R | 4127777..4128086 | 245..554 | 1550 | 100 | Plus |
chr3R | 27901430 | chr3R | 4127479..4127722 | 1..244 | 1220 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 4127479..4127722 | 1..244 | 100 | -> | Plus |
chr3R | 4127777..4128086 | 245..554 | 100 | -> | Plus |
chr3R | 4128144..4128790 | 555..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL1-RA | 1..1065 | 54..1118 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL1-RA | 1..1065 | 54..1118 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL1-RA | 1..1065 | 54..1118 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL1-RA | 1..1065 | 54..1118 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL1-RA | 1..1065 | 54..1118 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL1-RA | 18..1218 | 1..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL1-RA | 18..1218 | 1..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL1-RA | 20..1220 | 1..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL1-RA | 18..1218 | 1..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL1-RA | 20..1220 | 1..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8301757..8302066 | 245..554 | 100 | -> | Plus |
3R | 8301459..8301702 | 1..244 | 100 | -> | Plus |
3R | 8302124..8302770 | 555..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8301757..8302066 | 245..554 | 100 | -> | Plus |
3R | 8301459..8301702 | 1..244 | 100 | -> | Plus |
3R | 8302124..8302770 | 555..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8301757..8302066 | 245..554 | 100 | -> | Plus |
3R | 8301459..8301702 | 1..244 | 100 | -> | Plus |
3R | 8302124..8302770 | 555..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 4127181..4127424 | 1..244 | 100 | -> | Plus |
arm_3R | 4127479..4127788 | 245..554 | 100 | -> | Plus |
arm_3R | 4127846..4128492 | 555..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8042290..8042533 | 1..244 | 100 | -> | Plus |
3R | 8042588..8042897 | 245..554 | 100 | -> | Plus |
3R | 8042955..8043601 | 555..1201 | 100 | Plus |
Translation from 53 to 1117
> LD31571.hyp MQSILSSMRALALRQSTVEPLRLLHLSAVSEAARKGTREKARKKKVKVEV KKVGFIPHNQRNKKINVKRADKHVDDSWKQVPKDDCYVGRYYRWPVYSVQ EAIQCHRETHHPSMYNVPNAPLNLDIELNMQAEKITRFVDNFQRMAMIPH KFDHGEERKIIVFTKGNNEVLEAREAGASLVGGVELIKDITSGELLLSDY QYVIAHPNILAELVALRGLMKRKFPNPKSETLGTNLAEMIVKFSSGISYS AAKDEYQQNFGLITASVGTLDMDVQKLEENIKFLLQDINTMRPKREGRFI TRVLLKSPPSSEQLKIDPFVYVPEMWDKSTAKVKRDGAKKQTEPAEPQEA VASN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpL1-PA | 354 | CG7494-PA | 1..354 | 1..354 | 1813 | 100 | Plus |
Translation from 53 to 1117
> LD31571.pep MQSILSSMRALALRQSTVEPLRLLHLSAVSEAARKGTREKARKKKVKVEV KKVGFIPHNQRNKKINVKRADKHVDDSWKQVPKDDCYVGRYYRWPVYSVQ EAIQCHRETHHPSMYNVPNAPLNLDIELNMQAEKITRFVDNFQRMAMIPH KFDHGEERKIIVFTKGNNEVLEAREAGASLVGGVELIKDITSGELLLSDY QYVIAHPNILAELVALRGLMKRKFPNPKSETLGTNLAEMIVKFSSGISYS AAKDEYQQNFGLITASVGTLDMDVQKLEENIKFLLQDINTMRPKREGRFI TRVLLKSPPSSEQLKIDPFVYVPEMWDKSTAKVKRDGAKKQTEPAEPQEA VASN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18339-PA | 355 | GF18339-PA | 1..353 | 1..353 | 1599 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24696-PA | 354 | GG24696-PA | 1..354 | 1..354 | 1747 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18673-PA | 356 | GH18673-PA | 1..340 | 1..340 | 1516 | 85.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpL1-PA | 354 | CG7494-PA | 1..354 | 1..354 | 1813 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24185-PA | 355 | GI24185-PA | 1..355 | 1..354 | 1523 | 82.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23426-PA | 354 | GL23426-PA | 1..354 | 1..354 | 1619 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20391-PA | 354 | GA20391-PA | 1..354 | 1..354 | 1628 | 89.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23720-PA | 354 | GM23720-PA | 1..354 | 1..354 | 1883 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10532-PA | 353 | GJ10532-PA | 4..346 | 5..348 | 1479 | 83.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11393-PA | 357 | GK11393-PA | 1..352 | 1..352 | 1548 | 85.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25864-PA | 354 | GE25864-PA | 1..354 | 1..354 | 1840 | 96.3 | Plus |