BDGP Sequence Production Resources |
Search the DGRC for LD31602
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 316 |
Well: | 2 |
Vector: | pOT2 |
Associated Gene/Transcript | spin-RC |
Protein status: | LD31602.pep: gold |
Sequenced Size: | 2985 |
Gene | Date | Evidence |
---|---|---|
spin | 2008-04-29 | Picked prior to 5.5 |
spin | 2008-08-15 | Release 5.9 accounting |
spin | 2008-12-18 | 5.12 accounting |
2985 bp assembled on 2008-05-14
GenBank Submission: BT032842
> LD31602.complete TGTTCGCGTCGCGGAAGAAACAAGAAAGAAAAACAGCGAGAAGCACTGCA AATGCATTGGCTGCATTTAAAGAACAACCGCGATTAGAGGAAGTGTCTCA GTACACAGTCGAATTAGCCATACAAATTGGCAAAAGTGTTATAAAAGAGA AGCGCGGTGGTGTGCCAACAGCCCAAGAGCAAATTCTTTTGCATTCGCTT TTGAACCGCTTTCATCGCGAGTTCCCGTTTCTCTGTGTGCGTGAGCAAAG AGCGTGTGCAAATAACTTTTTGCCGCGTTGTCCGCCTGCTGCGAATTTCC AACCGAAAGAGGACAGCGAGAGCGCGAGAAGAGAAGAGAGGATCGAGTGA TCGGGTGAATGTCGCTGAAACACCAGAAGCAATCCTACCAACCGCTCCCA ACGGCGGCCGCCATGGACAATCCGGCGATGATCCAGAGCAGCGGTAGCAG TGGGAGCAGCTCCTCTGAGGAGGGCGGGAGTCGTGAGGATGTGGCCAATC TATCGCCGCTCGGACTGCCTACGACCTACTCGTCACAGCAATTGATGCCC TCGGATACGGACAGCATGGAGGAGGAGCGGCACCGACTGCGTCCCCACCA CCATCACCACCACCCACTGGGCGAGCACCACCACATCCCGGGCATACCAC CATCCGCCGTCGTGCCATCGCGTCTCTCCAGCGTGGGCAGATCGCAGTGG TTCACCGTTACCGTGCTATGCTTCGTCAACCTCATCAACTACATGGATCG CTTTACGATCGCAGGAGTTCTCACAGATGTCCGAAATGATTTCGATATTG GCAATGATAGTGCCGGACTTCTCCAGACGGTCTTCGTTATCTCGTACATG GTATGCGCCCCCATCTTCGGCTATCTGGGCGATCGTTACTCCCGCCCCTG GATAATGGCGGTGGGCGTGGGTCTGTGGAGCACCACCACCCTACTGGGGT CGTTCATGAAGCAGTTTGGATGGTTCATCGCCTTCAGAGCGCTGGTCGGG ATCGGCGAGGCATCGTACAGTACCATCGCACCGACGATTATCTCGGATCT GTTCGTGCACGACATGCGCTCCAAGATGCTGGCACTGTTCTACTTTGCCA TACCCGTGGGATCCGGTCTGGGATACATTGTGGGATCCAAGACAGCGCAC CTGGCCAACGATTGGCGCTGGGCTCTGAGGGTCACGCCCATTCTGGGCAT TGTGGCAGTTTTCCTCATTTTGCTGATCAAGGATCCGGTGCGGGGTCACA GCGAGGGATCGCACAATTTGGAGGCCACTACCTACAAGCAGGACATCAAG GCGTTGGTCAGGAACCGTTCCTTCATGCTCTCCACGGCTGGATTCACGTG CGTTGCCTTCGTGGCCGGAGCACTGGCCTGGTGGGGACCTTCCTTCATCT ATCTAGGCATGAAGATGCAGCCCGGCAACGAGAACATTGTCCAGGACGAC ATCTCGTACAAGTTTGGTCTGGTGGCCATGTTGGCCGGACTCATCGGAGT CCCGTTGGGCTCCTTTCTGGCCCAGCGATTGAGGGGTCGCTACGAGAACT GTGATCCGTACATCTGTGCGGTGGGACTTTTCATCTCGGCTCCGATGGTC TTCGCTGCTCTCGTGGTGCCGCAGACAAGCGAGAGCCTCTGCTTTTTCTT CGTTTTCGTGGCCCAGGTGGCACTGAACCTGTGCTGGTCCATTGTAGCCG ACATCCTACTGTATGTGGTGGTTCCCACGCGACGTTCAACAGCCGAGGCC TTCCAAATCCTCATCTCACACGCACTCGGTGATGCCGGCAGTCCGTATTT GGTTGGAGCAATCTCCGAGGCCATCATGAAACACCTGCACAAGAACCCCA GCGACTCTGGACTGACCACCGAGCTGCGAAGCATGTCCCAAGTGGCAGGT TCCGCGATCAGTAATGCCACCCAGGTGATCGCGGAAGCCACCACCAGTTT GATGGAAACAGCACGCTCGTCAGCCTCTCAGGAATACTCTGATGTGGAGC AATTCGAGGGACTGCAATATGCGCTCTTCTCCACCAGTTTTGTGGAGGTG CTGGGCGGCATTTTCTTCATATTCACCGCCTGCTTTATCATCAAAGACAA GTACAATGCCACACGAGGACTGCAAGATGCCACGGCTCAGCAACAGCAGC GGGATGAGCGCGGTCAGATTGCCTAATACCAGCCGATTCTGGAGGTTATG CTGCGCACTCAGAGCTCCGATGGCATGCCGGGTGAACTGATACTGACTGA AAACCATCTTTAATTTAATTTACGGTCACTCGCACCACGCACATCCCGCA TCGGATCGTACTGGAAGCTTACGGGGACGGGGACACCTTGCTCAGTTGGG CGGACAAGTTCCCGATGTTCATGTTCCTATTGGAAGGGATCGGAGGAAGG AGGAAAATGGGGGAAAGGACCACCATGCCAACACGTTCAAGCACGCCACA CCGATTTGTAGATATATATACAAACAAAATCAAAAACTCTCACCCAGGCA CTCACTCACTCACCAAGTCATAACATAACACAGATCATTTTACTTGTAAA CGTCAAAGGTCTTGGGTACCCAGGATACCTTGCTTCACCCACGTAGTCGT AGATAGGTCTAGCTCTGGTATTTTAGACTAAATCAAAATTAGCAAGAGTT TCAAGCGGACTCGCATTCGAAGAAGTGCTCCCTCAGATCGGATAATGTAA ATAGATTATCTCAGGCATCGAATGCGTAGGTCGTGCAGTTTGGATATTTA TATTAACGAATGTATATTTAATATGAATTGTAAATATAGATAAGCACCGG GCCATTGTATAAGTGCGTAGTCTATTTAATCAATTTTATCATAACGCCTT AGTTTTACACTGAACATAATTTTAATCATAGCCTTAGTTAGTTGTGTAAC GAATTGGAGAAATGTGTGCACCCTCAGCAATTACTGAATATTACAGCAAA ACTATTTTGAACCAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
spin-RC | 3225 | spin-RC | 47..3013 | 1..2967 | 14835 | 100 | Plus |
spin-RB | 3420 | spin-RB | 46..2171 | 1..2126 | 10630 | 100 | Plus |
spin-RD | 3400 | spin-RD | 37..1485 | 1..1449 | 7245 | 100 | Plus |
spin-RB | 3420 | spin-RB | 2367..3208 | 2126..2967 | 4210 | 100 | Plus |
spin-RD | 3400 | spin-RD | 2358..3199 | 2126..2967 | 4210 | 100 | Plus |
spin-RD | 3400 | spin-RD | 1727..2162 | 1691..2126 | 2120 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 12024534..12025372 | 2125..2963 | 4150 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 12012372..12013136 | 1..765 | 3765 | 99.5 | Plus |
chr2R | 21145070 | chr2R | 12018887..12019247 | 762..1122 | 1805 | 100 | Plus |
chr2R | 21145070 | chr2R | 12019656..12019983 | 1122..1449 | 1595 | 99.1 | Plus |
chr2R | 21145070 | chr2R | 12020177..12020438 | 1450..1711 | 1310 | 100 | Plus |
chr2R | 21145070 | chr2R | 12023518..12023691 | 1811..1984 | 840 | 98.9 | Plus |
chr2R | 21145070 | chr2R | 12023756..12023897 | 1985..2126 | 680 | 98.6 | Plus |
chr2R | 21145070 | chr2R | 12023354..12023453 | 1711..1810 | 500 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 16137203..16138045 | 2125..2967 | 4215 | 100 | Plus |
2R | 25286936 | 2R | 16125019..16125783 | 1..765 | 3825 | 100 | Plus |
2R | 25286936 | 2R | 16131539..16131899 | 762..1122 | 1805 | 100 | Plus |
2R | 25286936 | 2R | 16132308..16132635 | 1122..1449 | 1640 | 100 | Plus |
2R | 25286936 | 2R | 16132829..16133090 | 1450..1711 | 1310 | 100 | Plus |
2R | 25286936 | 2R | 16136187..16136360 | 1811..1984 | 870 | 100 | Plus |
2R | 25286936 | 2R | 16136425..16136566 | 1985..2126 | 710 | 100 | Plus |
2R | 25286936 | 2R | 16136026..16136125 | 1711..1810 | 500 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 16138402..16139244 | 2125..2967 | 4215 | 100 | Plus |
2R | 25260384 | 2R | 16126218..16126982 | 1..765 | 3825 | 100 | Plus |
2R | 25260384 | 2R | 16132738..16133098 | 762..1122 | 1805 | 100 | Plus |
2R | 25260384 | 2R | 16133507..16133834 | 1122..1449 | 1640 | 100 | Plus |
2R | 25260384 | 2R | 16134028..16134289 | 1450..1711 | 1310 | 100 | Plus |
2R | 25260384 | 2R | 16137386..16137559 | 1811..1984 | 870 | 100 | Plus |
2R | 25260384 | 2R | 16137624..16137765 | 1985..2126 | 710 | 100 | Plus |
2R | 25260384 | 2R | 16137225..16137324 | 1711..1810 | 500 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 12012372..12013135 | 1..764 | 99 | -> | Plus |
chr2R | 12018890..12019247 | 765..1122 | 100 | -> | Plus |
chr2R | 12019657..12019983 | 1123..1449 | 99 | -> | Plus |
chr2R | 12020177..12020438 | 1450..1711 | 100 | -> | Plus |
chr2R | 12023355..12023453 | 1712..1810 | 100 | -> | Plus |
chr2R | 12023518..12023691 | 1811..1984 | 98 | -> | Plus |
chr2R | 12023756..12023897 | 1985..2126 | 98 | -> | Plus |
chr2R | 12024536..12025372 | 2127..2963 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spin-RC | 1..1818 | 359..2176 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spin-RC | 1..1818 | 359..2176 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spin-RC | 1..1818 | 359..2176 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spin-RC | 1..1818 | 359..2176 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spin-RC | 1..1818 | 359..2176 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spin-RC | 37..2999 | 1..2963 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spin-RC | 37..2999 | 1..2963 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spin-RC | 39..3001 | 1..2963 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spin-RC | 37..2999 | 1..2963 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spin-RC | 39..3001 | 1..2963 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16125019..16125782 | 1..764 | 100 | -> | Plus |
2R | 16131542..16131899 | 765..1122 | 100 | -> | Plus |
2R | 16132309..16132635 | 1123..1449 | 100 | -> | Plus |
2R | 16132829..16133090 | 1450..1711 | 100 | -> | Plus |
2R | 16136027..16136125 | 1712..1810 | 100 | -> | Plus |
2R | 16136187..16136360 | 1811..1984 | 100 | -> | Plus |
2R | 16136425..16136566 | 1985..2126 | 100 | -> | Plus |
2R | 16137205..16138041 | 2127..2963 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16125019..16125782 | 1..764 | 100 | -> | Plus |
2R | 16131542..16131899 | 765..1122 | 100 | -> | Plus |
2R | 16132309..16132635 | 1123..1449 | 100 | -> | Plus |
2R | 16132829..16133090 | 1450..1711 | 100 | -> | Plus |
2R | 16136027..16136125 | 1712..1810 | 100 | -> | Plus |
2R | 16136187..16136360 | 1811..1984 | 100 | -> | Plus |
2R | 16136425..16136566 | 1985..2126 | 100 | -> | Plus |
2R | 16137205..16138041 | 2127..2963 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16125019..16125782 | 1..764 | 100 | -> | Plus |
2R | 16131542..16131899 | 765..1122 | 100 | -> | Plus |
2R | 16132309..16132635 | 1123..1449 | 100 | -> | Plus |
2R | 16132829..16133090 | 1450..1711 | 100 | -> | Plus |
2R | 16136027..16136125 | 1712..1810 | 100 | -> | Plus |
2R | 16136187..16136360 | 1811..1984 | 100 | -> | Plus |
2R | 16136425..16136566 | 1985..2126 | 100 | -> | Plus |
2R | 16137205..16138041 | 2127..2963 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 12012524..12013287 | 1..764 | 100 | -> | Plus |
arm_2R | 12019047..12019404 | 765..1122 | 100 | -> | Plus |
arm_2R | 12019814..12020140 | 1123..1449 | 100 | -> | Plus |
arm_2R | 12020334..12020595 | 1450..1711 | 100 | -> | Plus |
arm_2R | 12023532..12023630 | 1712..1810 | 100 | -> | Plus |
arm_2R | 12023692..12023865 | 1811..1984 | 100 | -> | Plus |
arm_2R | 12023930..12024071 | 1985..2126 | 100 | -> | Plus |
arm_2R | 12024710..12025546 | 2127..2963 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16137386..16137559 | 1811..1984 | 100 | -> | Plus |
2R | 16137624..16137765 | 1985..2126 | 100 | -> | Plus |
2R | 16137226..16137324 | 1712..1810 | 100 | -> | Plus |
2R | 16126218..16126981 | 1..764 | 100 | -> | Plus |
2R | 16132741..16133098 | 765..1122 | 100 | -> | Plus |
2R | 16133508..16133834 | 1123..1449 | 100 | -> | Plus |
2R | 16134028..16134289 | 1450..1711 | 100 | -> | Plus |
2R | 16138404..16139240 | 2127..2963 | 100 | Plus |
Translation from 358 to 2175
> LD31602.pep MSLKHQKQSYQPLPTAAAMDNPAMIQSSGSSGSSSSEEGGSREDVANLSP LGLPTTYSSQQLMPSDTDSMEEERHRLRPHHHHHHPLGEHHHIPGIPPSA VVPSRLSSVGRSQWFTVTVLCFVNLINYMDRFTIAGVLTDVRNDFDIGND SAGLLQTVFVISYMVCAPIFGYLGDRYSRPWIMAVGVGLWSTTTLLGSFM KQFGWFIAFRALVGIGEASYSTIAPTIISDLFVHDMRSKMLALFYFAIPV GSGLGYIVGSKTAHLANDWRWALRVTPILGIVAVFLILLIKDPVRGHSEG SHNLEATTYKQDIKALVRNRSFMLSTAGFTCVAFVAGALAWWGPSFIYLG MKMQPGNENIVQDDISYKFGLVAMLAGLIGVPLGSFLAQRLRGRYENCDP YICAVGLFISAPMVFAALVVPQTSESLCFFFVFVAQVALNLCWSIVADIL LYVVVPTRRSTAEAFQILISHALGDAGSPYLVGAISEAIMKHLHKNPSDS GLTTELRSMSQVAGSAISNATQVIAEATTSLMETARSSASQEYSDVEQFE GLQYALFSTSFVEVLGGIFFIFTACFIIKDKYNATRGLQDATAQQQQRDE RGQIA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11295-PA | 712 | GF11295-PA | 1..436 | 1..449 | 1887 | 81.5 | Plus |
Dana\GF11295-PA | 712 | GF11295-PA | 446..671 | 365..587 | 720 | 61.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20571-PA | 605 | GG20571-PA | 1..605 | 1..605 | 3156 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22071-PA | 576 | GH22071-PA | 1..557 | 1..599 | 1997 | 67.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
spin-PC | 605 | CG8428-PC | 1..605 | 1..605 | 3120 | 100 | Plus |
spin-PB | 630 | CG8428-PB | 1..598 | 1..598 | 3043 | 98.8 | Plus |
spin-PA | 605 | CG8428-PA | 1..605 | 1..605 | 2906 | 92.9 | Plus |
spin-PD | 630 | CG8428-PD | 1..598 | 1..598 | 2829 | 91.6 | Plus |
spin-PE | 402 | CG8428-PE | 1..365 | 1..365 | 1918 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19157-PA | 590 | GI19157-PA | 1..543 | 1..585 | 1927 | 66.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20621-PA | 609 | GL20621-PA | 1..574 | 1..586 | 2368 | 77.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21072-PB | 591 | GA21072-PB | 1..589 | 1..601 | 2394 | 76.7 | Plus |
Dpse\GA21072-PA | 609 | GA21072-PA | 1..576 | 1..588 | 2367 | 77.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21663-PA | 605 | GM21663-PA | 1..605 | 1..605 | 3203 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11163-PA | 710 | GD11163-PA | 1..451 | 1..451 | 2436 | 99.1 | Plus |
Dsim\GD11163-PA | 710 | GD11163-PA | 472..710 | 367..605 | 1009 | 81.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22291-PA | 668 | GJ22291-PA | 1..447 | 1..492 | 1604 | 66.7 | Plus |
Dvir\GJ22291-PA | 668 | GJ22291-PA | 418..630 | 365..585 | 607 | 55.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21866-PA | 699 | GK21866-PA | 1..612 | 1..587 | 2176 | 71 | Plus |
Translation from 358 to 2175
> LD31602.hyp MSLKHQKQSYQPLPTAAAMDNPAMIQSSGSSGSSSSEEGGSREDVANLSP LGLPTTYSSQQLMPSDTDSMEEERHRLRPHHHHHHPLGEHHHIPGIPPSA VVPSRLSSVGRSQWFTVTVLCFVNLINYMDRFTIAGVLTDVRNDFDIGND SAGLLQTVFVISYMVCAPIFGYLGDRYSRPWIMAVGVGLWSTTTLLGSFM KQFGWFIAFRALVGIGEASYSTIAPTIISDLFVHDMRSKMLALFYFAIPV GSGLGYIVGSKTAHLANDWRWALRVTPILGIVAVFLILLIKDPVRGHSEG SHNLEATTYKQDIKALVRNRSFMLSTAGFTCVAFVAGALAWWGPSFIYLG MKMQPGNENIVQDDISYKFGLVAMLAGLIGVPLGSFLAQRLRGRYENCDP YICAVGLFISAPMVFAALVVPQTSESLCFFFVFVAQVALNLCWSIVADIL LYVVVPTRRSTAEAFQILISHALGDAGSPYLVGAISEAIMKHLHKNPSDS GLTTELRSMSQVAGSAISNATQVIAEATTSLMETARSSASQEYSDVEQFE GLQYALFSTSFVEVLGGIFFIFTACFIIKDKYNATRGLQDATAQQQQRDE RGQIA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
spin-PC | 605 | CG8428-PC | 1..605 | 1..605 | 3120 | 100 | Plus |
spin-PB | 630 | CG8428-PB | 1..598 | 1..598 | 3043 | 98.8 | Plus |
spin-PA | 605 | CG8428-PA | 1..605 | 1..605 | 2906 | 92.9 | Plus |
spin-PD | 630 | CG8428-PD | 1..598 | 1..598 | 2829 | 91.6 | Plus |
spin-PE | 402 | CG8428-PE | 1..365 | 1..365 | 1918 | 99.7 | Plus |