BDGP Sequence Production Resources |
Search the DGRC for LD31675
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 316 |
Well: | 75 |
Vector: | pOT2 |
Associated Gene/Transcript | CycY-RA |
Protein status: | LD31675.pep: gold |
Preliminary Size: | 2324 |
Sequenced Size: | 2139 |
Gene | Date | Evidence |
---|---|---|
CG14939 | 2001-01-01 | Release 2 assignment |
CG14939 | 2001-11-29 | Blastp of sequenced clone |
CG14939 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14939 | 2008-04-29 | Release 5.5 accounting |
CG14939 | 2008-08-15 | Release 5.9 accounting |
CG14939 | 2008-12-18 | 5.12 accounting |
2139 bp (2139 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069580
> LD31675.complete AAAATACGATACATTTCATTTTCGAGCAGCAAACGCTCGACGACGGGCAG CGGTAATTGTGGAGCGATAGAAACGCCAGCGCCATGCCCATAGACATAGA CGCACGACGACCAAGTGCCAAAAGCGAGAACCGAGCGTGAGCGACTGCCA GGAGCAGGATCCGTAACCACGGGGTCCATCCGCTAGTCAAGAGAGAGTGA GCAAGCGAGCGAGTGAGTGCCAAGCCAAGTTTGCATTTAGTTTGAGCGCC CGACCAACCGAACCAATCCGAAACGGCAAAATGGGCAACAAGAACTCGTG CTGCGCGTACTCCAGTCCGCAGTCGGACCGCAAGTCTAAGGACATGCCGC CCGTCTTCGAGGAGCGGATTATCCAGCTGGGTCATCCGCCGCACACGTCA CAGCACCAGTTGGACGGCCACCATGGATCCGCGTCGGCGGTGCACCTGCA TCACCATCATCACGGCCACAATCAGCAACAGAATCAGCAGGGTGGCGGCG GTGACAACTATGAGAACCAGCAGAATCTGCAGCACATCTCCGAGCGAGAG GCGCTGGAGGGCGAGGAGGATCCGTCGGTCGATCCCACTGCAGCCACCAT GTTCCTGGAACGATCAAAGGTGGAGAACGGCGGCATGACGCGCAAGCGTT CGCAACAGCAGATTGCCCAGCAGGCGGGCAGCGGCGGCGGAGGAGGCGGC GGCGGTGGCGGCGGCAGTACTCCCGGTGGCAATAGTTGCGGCGGTGGTGG CGGCATGAAGAAGAGCTCCTCCTGCTCGACGATCTATCTGGACGACAGCA CTGTGTCGCAGCCGAATCTTAAGAATACGGTCAAATGCGTCTCACTGGCC ATTTACTATCACATCAAGAATCGGCAATCGGATCGCCGGCTGGACATCTT CGACGAGAAGCTTCATCCGCTGACCCACGACCAGGTGCCGGATAACTATG ACACGCACAATCCGGAACACCGGCAGATCTACAAGTTCGTGCGCACGCTC TTTAACGCCGCCCAGCTGACGGCCGAGTGTGCGATCATCACGCTAGTCTA CCTGGAGCGGCTACTCACCTACGCCGAGCTGGATGTGGGACCCTGCAACT GGAAGCGCATGGTGTTGGGTGCCATTCTCCTCGCCTCAAAGGTGTGGGAT GACCAGGCCGTTTGGAATGTAGATTACTGCCAAATACTCAAAGACATCAC CGTGGAGGACATGAACGAGCTGGAGCGCCAGTTCCTCGAGCTGCTGCAGT TCAACATCAATGTACCGTCCTCGGTGTACGCCAAATACTACTTCGACCTG CGCACGCTCGCCGAGGCCAACGAGCTCAACTTCCCCACGGAGCCGCTGTC CAAGGAGCGGGCCCAGAAGCTGGAGGCCATGTCGCGTGTGATGCAGGACA AGGTCACTGCCGAGGCACTGAAGAATGGGATCAAGAAGTGGTCCTCCATG GACAACATCAGTCAGGGCGGGCCGCGACGCAGCGTGGCCATACTATCGTG ATTTATATTAGCTTACTAAAACCGAACAACCAACCAACAGCAGCAATGAG ATCCGTACTCTGTAGTCCGTAGTCCGATCGAACGTCATTTGAGAACCGTA GCTCTGCGCTGAATCAGATTTTGCACACAGATTCAGATACATTTCGTAGG CCACCCGGTTGCATAAGCTTTTGCGGGTGGCTTTTTAGCCAGCACACAGA CTCTAAAAGGAACACCCAAATACGTGCAGAAAGAATCACAGTCTTATATA CAATATATACATACACGAAGAAAAGCGTTTTAACCACACGTCTCGAATTA AGGACCACTTTTTACATATACGTACATGCGATCGATGTATGTAAGCGAAA CTACCGATGCAGTCATGGATTTGGATGATGATTTTAAACAGAGACACAGA AGTACTACTACAGCAACGCGTAACCAATTGCCAAACGAAAGATCACAGAA GCAGAAAGAGATACAGAAACCTAAACCGAACAGTAGAGAATTGTTTGTAC AAAACGGCTTAAATAATATTGTAATTGACTTGGCCACCTAATCCAGCTGG CATCTAAGCAATTTAATCTCAACGGTTGGCCACGGCCACCAAATTGTCAT TTACTTAGCGCGTCCGCGCCCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 11811591..11812686 | 1121..26 | 5480 | 100 | Minus |
2L | 23513712 | 2L | 11810479..11811500 | 2139..1118 | 5080 | 99.8 | Minus |
2L | 23513712 | 2L | 11813725..11813753 | 29..1 | 145 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tabor | 7345 | Tabor TABOR 7345bp | 6619..6713 | 1921..2014 | 121 | 61.5 | Plus |
accord2 | 7650 | accord2 QBERT 7650bp | 5523..5616 | 1773..1683 | 120 | 61.7 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6791..6898 | 383..490 | 116 | 60 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 11809141..11810143 | 1119..2121 | 99 | <- | Minus |
chr2L | 11810238..11811326 | 30..1118 | 96 | <- | Minus |
chr2L | 11812370..11812398 | 1..29 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14939-RA | 1..1221 | 281..1501 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycY-RA | 1..1221 | 281..1501 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycY-RA | 1..1221 | 281..1501 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14939-RA | 1..1221 | 281..1501 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycY-RA | 1..1221 | 281..1501 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14939-RA | 48..2168 | 1..2121 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycY-RA | 48..2168 | 1..2121 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycY-RA | 28..2148 | 1..2121 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14939-RA | 48..2168 | 1..2121 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycY-RA | 28..2148 | 1..2121 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11810497..11811499 | 1119..2121 | 100 | <- | Minus |
2L | 11811594..11812682 | 30..1118 | 100 | <- | Minus |
2L | 11813725..11813753 | 1..29 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11810497..11811499 | 1119..2121 | 100 | <- | Minus |
2L | 11811594..11812682 | 30..1118 | 100 | <- | Minus |
2L | 11813725..11813753 | 1..29 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11810497..11811499 | 1119..2121 | 100 | <- | Minus |
2L | 11811594..11812682 | 30..1118 | 100 | <- | Minus |
2L | 11813725..11813753 | 1..29 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 11810497..11811499 | 1119..2121 | 100 | <- | Minus |
arm_2L | 11811594..11812682 | 30..1118 | 100 | <- | Minus |
arm_2L | 11813725..11813753 | 1..29 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11810497..11811499 | 1119..2121 | 100 | <- | Minus |
2L | 11811594..11812682 | 30..1118 | 100 | <- | Minus |
2L | 11813725..11813753 | 1..29 | 100 | Minus |
Translation from 280 to 1500
> LD31675.pep MGNKNSCCAYSSPQSDRKSKDMPPVFEERIIQLGHPPHTSQHQLDGHHGS ASAVHLHHHHHGHNQQQNQQGGGGDNYENQQNLQHISEREALEGEEDPSV DPTAATMFLERSKVENGGMTRKRSQQQIAQQAGSGGGGGGGGGGGSTPGG NSCGGGGGMKKSSSCSTIYLDDSTVSQPNLKNTVKCVSLAIYYHIKNRQS DRRLDIFDEKLHPLTHDQVPDNYDTHNPEHRQIYKFVRTLFNAAQLTAEC AIITLVYLERLLTYAELDVGPCNWKRMVLGAILLASKVWDDQAVWNVDYC QILKDITVEDMNELERQFLELLQFNINVPSSVYAKYYFDLRTLAEANELN FPTEPLSKERAQKLEAMSRVMQDKVTAEALKNGIKKWSSMDNISQGGPRR SVAILS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23396-PA | 402 | GF23396-PA | 1..402 | 1..406 | 2054 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10296-PA | 402 | GG10296-PA | 1..402 | 1..406 | 2060 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13072-PA | 404 | GH13072-PA | 1..404 | 1..406 | 1814 | 88.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CycY-PB | 406 | CG14939-PB | 1..406 | 1..406 | 2161 | 100 | Plus |
CycY-PA | 406 | CG14939-PA | 1..406 | 1..406 | 2161 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17691-PA | 401 | GI17691-PA | 1..401 | 1..406 | 1791 | 87.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15279-PA | 395 | GL15279-PA | 1..395 | 1..406 | 1809 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13366-PA | 395 | GA13366-PA | 1..395 | 1..406 | 1809 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10957-PA | 404 | GM10957-PA | 1..404 | 1..406 | 2182 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22156-PA | 404 | GD22156-PA | 1..404 | 1..406 | 2182 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17477-PA | 393 | GJ17477-PA | 1..393 | 1..406 | 1876 | 89 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14972-PA | 407 | GK14972-PA | 1..407 | 1..406 | 1818 | 90 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12676-PA | 400 | GE12676-PA | 1..400 | 1..406 | 2117 | 97.3 | Plus |
Translation from 280 to 1500
> LD31675.hyp MGNKNSCCAYSSPQSDRKSKDMPPVFEERIIQLGHPPHTSQHQLDGHHGS ASAVHLHHHHHGHNQQQNQQGGGGDNYENQQNLQHISEREALEGEEDPSV DPTAATMFLERSKVENGGMTRKRSQQQIAQQAGSGGGGGGGGGGGSTPGG NSCGGGGGMKKSSSCSTIYLDDSTVSQPNLKNTVKCVSLAIYYHIKNRQS DRRLDIFDEKLHPLTHDQVPDNYDTHNPEHRQIYKFVRTLFNAAQLTAEC AIITLVYLERLLTYAELDVGPCNWKRMVLGAILLASKVWDDQAVWNVDYC QILKDITVEDMNELERQFLELLQFNINVPSSVYAKYYFDLRTLAEANELN FPTEPLSKERAQKLEAMSRVMQDKVTAEALKNGIKKWSSMDNISQGGPRR SVAILS*