Clone LD31834 Report

Search the DGRC for LD31834

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:318
Well:34
Vector:pOT2
Associated Gene/Transcriptbru-3-RA
Protein status:LD31834.pep: gold
Preliminary Size:2625
Sequenced Size:2605

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10046 2001-01-01 Release 2 assignment
CG12478 2001-01-01 Release 2 assignment
CG12478 2001-07-04 Blastp of sequenced clone
CG12478 2003-01-01 Sim4 clustering to Release 3
bru-3 2008-04-29 Release 5.5 accounting
bru-3 2008-08-15 Release 5.9 accounting
bru-3 2008-12-18 5.12 accounting

Clone Sequence Records

LD31834.complete Sequence

2605 bp (2605 high quality bases) assembled on 2001-07-04

GenBank Submission: AY060398

> LD31834.complete
TTCTGTGTAGTTAAGTCGGAATATTTCGTATAGTTCTCGTCGACTGTCGT
GTGACATTTGTTCTTCAATTCAGAAACGCATATTGAAACGCAGCGATAAT
ACAAATTACGAATATTCAATGAAGAAGATTTAAACCAAACCAAACCAAAC
CAAACAAAACAAAAAACCAAACCAAACCAAAGAAAACCAACCAATTAAAA
TTAAAAATTTCAATTCGCTTCAAAAATATATTACAAATATAACAGCCAAT
TTAATCAAATCAAATTCGCCAGAAAAATCGCAAACAAAGTTTACAAAATT
CGTTTACTCAATTCCATAACACAAAACCAGCTACAACTAATTCAAATATA
TAACTGTTAAATCTATCAGAGAGAAAGAAAGAGCGAGAGAAAGAAAAAGA
GATAGAAAAGTACACGCGTGTGTTTAAATACTGGAAAATACAGATAAGAT
AAATTATTATTAACACTAAGCCATACACACATTATAGAAGGCTAACCACA
CGAAAATACATTAAAATCAATAAGTAACCAGTACAGAGAAGACAGTTCAA
GTGAAAAACAGAAACGAAACTTTCAAAAAGTGCTTAAAAGTAATCAAAAG
AATTATTCAAGAGATTCAAATTACAAAAAAAAAAAACTTAGACAAATAAA
CAACGGTCATTTTCAGAGGAAGATATACAAAAAGCTTCCAACAGAATCGG
TGAAAATCGTTAACAATTTTTTCTCGCAAAGGCGCCACGTCCAAGAGCAA
ATCGTTCCATATGGTTCATATTATTGAATTGGTCGGCCAGCCGAAGGTTG
AGTTTGCTCAACAAGTTACTGTAAGTTGCCATCATCCATTAATACCACCA
GCCATCAAATTAATGAACCGTGCTTTACAGCTGAAGCCAGCTGAAAATGA
AAGTCGCAGCGAGCATTTAGATCGCAAGCTGTTCGTTGGCATGCTCAGCA
AACAACAGACCGAAGACGATGTTAGACAAATCTTCCATCCCTTCGGCACT
ATAGAGGAGTGCACCATACTTCGTGGGCCGGACGGTGCTAGCAAAGGCTG
CGCTTTCGTCAAATTTGGTTCGCAGCAGGAGGCCCAGTCAGCAATAACCA
ACCTACACGGAAGTCAAACTATGCCGGGCGCATCCTCCAGCCTGGTCGTC
AAATACGCCGACACGGAGAAGGAGCGACAAATAAGGCGCATGCAGCAAAT
GGCCGGTCACATGAACCTGCTGAATCCGTTCGTCTTTAATCAGTTCAGTC
CGTACGGCGCCTACGCCCAGCAACAGCAACAGGCCGCTCTGATGGCCGCC
GCTGCCACGGCACCCGGATCCGCAGCCGCCTACATGAACCCGATGGCGGC
TCTGGCAACGCAGATACCTCATGGCCTAAACGGCACCGGCCAGCCCCCCT
CGCTGCCGTCGCCGACCATGCCCAACTTCAACATGGGCGCCAACACGCCC
AACGGACAGCCCGGCGGAGCGGCCGCCGCTGCTGCTGCGGCGGCTGCCGC
GGACGGCGTCTTCACGAACGGCATTCCACAAACGGCATTCCCAGGACATC
CGCTGCACTTGACTATACCGCCACAAGGTTTGCCAAACGGCGATGCTGCT
ACCCTGCAACATGCCTTCCCTGGTCTGCCACCGTTTCCAGGAGTTGCCTT
TCCCGCCGTCTATGGACAGTTTCCACAAGCTTTACCACCTCCCCTAGCGG
CGGTTGCACCCACTCAGCGTGAAGATTTTCTGATGTTCCCAGGATGTTCG
ATATCCGGACCCGAGGGATGCAATCTCTTCATCTACCATTTGCCCCAGGA
GTTTGGCGACGCCGAGTTAATGCAAATGTTCCTGCCCTTTGGCAATGTGA
TCAGCTCCAAGGTCTTCATCGATCGTGCTACAAACCAGAGCAAATGTTTC
GGATTTGTTTCATTCGATAATCCCGCCAGCGCTCAAGCGGCCATTCAGGC
CATGAATGGCTTCCAGATTGGCATGAAAAGACTGAAAGTTCAATTGAAGC
GGCCAAAGGATGCCAGTCGACCCTATTAACAATCGGAGTTCCTTAAACGC
AATTCACAACAACCAACTGGAGCAACAACATCAGCAACAGGCGCTTTGCC
AACAACTACCGCATTTTCAGCAGCCACGCCCACATCGGCAGTAACCTCCG
TATCAGCAACAGTGACAACAACGGCCCACTATAATAACCTTGGCAGCAGC
TTTAGGCCAACCTTACCTTTGCCCACTGAAAGCTCCAACCACAATGCCCA
CATACCCTATACATTTGCCAGCTGGCGCAGCGGTACCTACTGCTATCGCA
ACCACAACAACAATAGTGAAAACTACAGCGATAACAACAACAACCACAGG
AACGTACCCGATTCCCAATCCCAAAACGATACATCATCCAACACCAATTG
CTCCAAAGTTGAACTGGTCGAGAGACTATTCATGTGGCAACAGCAAAAGC
GAAAGGCCTAAAAGTAACATCAAACACAACAGCAACCATAACAACTGCAG
CTACAATAAGGAGCAACTATTGATGGGATGGTCGTCAACCATGCTATGTG
AAAACGATTATAGAAATGAAACATGCAAAGCGTATGTAAAAAAAAAAAAA
AAAAA

LD31834.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:30:56
Subject Length Description Subject Range Query Range Score Percent Strand
bru-3-RA 2620 bru-3-RA 15..2619 1..2605 13010 99.9 Plus
bru-3.a 2608 bru-3.a 15..1660 1..1646 8230 100 Plus
bru-3-RB 2495 bru-3-RB 883..2442 1046..2605 7785 99.9 Plus
bru-3.a 2608 bru-3.a 1660..2541 1724..2605 4395 99.8 Plus
bru-3-RB 2495 bru-3-RB 15..834 1..820 4100 100 Plus
bru-3-RB 2495 bru-3-RB 835..883 863..911 245 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 22:27:14
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 13528489..13529115 2527..1901 3105 99.7 Minus
chr3L 24539361 chr3L 13654617..13655078 826..365 2265 99.4 Minus
chr3L 24539361 chr3L 13656590..13656953 364..1 1820 100 Minus
chr3L 24539361 chr3L 13531970..13532249 1547..1268 1400 100 Minus
chr3L 24539361 chr3L 13529185..13529365 1902..1722 905 100 Minus
chr3L 24539361 chr3L 13532323..13532467 1270..1126 725 100 Minus
chr3L 24539361 chr3L 13592582..13592718 1047..911 685 100 Minus
chr3L 24539361 chr3L 13531737..13531835 1646..1548 495 100 Minus
chr3L 24539361 chr3L 13574430..13574512 1127..1045 415 100 Minus
chr3L 24539361 chr3L 13530807..13530885 1724..1646 395 100 Minus
chr3L 24539361 chr3L 13528169..13528229 2587..2527 305 100 Minus
chr3L 24539361 chr3L 13628756..13628804 911..863 245 100 Minus
chr3L 24539361 chr3L 13641788..13641829 862..821 210 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:25:40 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 22:27:11
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 13538246..13538872 2527..1901 3135 100 Minus
3L 28110227 3L 13664413..13664874 826..365 2295 99.8 Minus
3L 28110227 3L 13666386..13666749 364..1 1820 100 Minus
3L 28110227 3L 13541722..13542001 1547..1268 1400 100 Minus
3L 28110227 3L 13538942..13539122 1902..1722 905 100 Minus
3L 28110227 3L 13542075..13542219 1270..1126 725 100 Minus
3L 28110227 3L 13602341..13602477 1047..911 685 100 Minus
3L 28110227 3L 13541489..13541587 1646..1548 495 100 Minus
3L 28110227 3L 13584191..13584273 1127..1045 415 100 Minus
3L 28110227 3L 13540564..13540642 1724..1646 395 100 Minus
3L 28110227 3L 13537919..13537997 2605..2527 380 98.7 Minus
3L 28110227 3L 13638517..13638565 911..863 245 100 Minus
3L 28110227 3L 13651555..13651596 862..821 210 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:53:10
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 13531346..13531972 2527..1901 3135 100 Minus
3L 28103327 3L 13657513..13657974 826..365 2295 99.7 Minus
3L 28103327 3L 13659486..13659849 364..1 1820 100 Minus
3L 28103327 3L 13534822..13535101 1547..1268 1400 100 Minus
3L 28103327 3L 13532042..13532222 1902..1722 905 100 Minus
3L 28103327 3L 13535175..13535319 1270..1126 725 100 Minus
3L 28103327 3L 13595441..13595577 1047..911 685 100 Minus
3L 28103327 3L 13534589..13534687 1646..1548 495 100 Minus
3L 28103327 3L 13577291..13577373 1127..1045 415 100 Minus
3L 28103327 3L 13533664..13533742 1724..1646 395 100 Minus
3L 28103327 3L 13531019..13531097 2605..2527 380 98.7 Minus
3L 28103327 3L 13631617..13631665 911..863 245 100 Minus
3L 28103327 3L 13644655..13644696 862..821 210 100 Minus
Blast to na_te.dros performed 2019-03-15 22:27:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2356..2834 2062..2519 257 55.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6772..7240 2056..2524 192 54.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2423..2836 2056..2505 175 55.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2314..2434 2231..2348 174 62.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2769..2886 2057..2172 172 64.5 Plus
Dana\Tom 7060 Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). 584..893 203..515 161 56 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3253..3433 2270..2454 159 58 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2357..2429 2437..2509 158 68.5 Plus
Stalker2 7672 Stalker2 STALKER2 7672bp 1933..2019 100..189 155 65.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2302..2421 2080..2200 152 62.9 Plus
ZAM 8435 ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). 2631..2714 2299..2383 152 67.4 Plus
McClintock 6450 McClintock McCLINTOCK 6450bp 762..1100 318..656 151 54.1 Plus
gypsy9 5349 gypsy9 GYPSY9 5349bp 287..512 438..655 144 57 Plus
Dtei\I-element 5386 Dtei\I-element DTEII 5386bp 1156..1276 2295..2414 133 61 Plus
Doc2-element 4789 Doc2-element DOC2 4789bp 312..586 2064..2344 131 53 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1526..1585 2056..2113 115 68.3 Plus

LD31834.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 22:28:24 Download gff for LD31834.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 13592583..13592717 912..1046 100 <- Minus
chr3L 13628756..13628804 863..911 100 <- Minus
chr3L 13641788..13641829 821..862 100 <- Minus
chr3L 13528169..13528228 2528..2587 100 <- Minus
chr3L 13528489..13528662 2354..2527 100 == Minus
chr3L 13528718..13529114 1902..2298 99 <- Minus
chr3L 13529186..13529362 1725..1901 100 <- Minus
chr3L 13530807..13530884 1647..1724 100 <- Minus
chr3L 13531737..13531835 1548..1646 100 <- Minus
chr3L 13531970..13532246 1271..1547 100 <- Minus
chr3L 13532323..13532466 1127..1270 100 <- Minus
chr3L 13574431..13574510 1047..1126 100 <- Minus
chr3L 13654623..13655034 409..820 99 == Minus
chr3L 13656590..13656759 195..364 100 == Minus
chr3L 13656823..13656953 1..131 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:49:05 Download gff for LD31834.complete
Subject Subject Range Query Range Percent Splice Strand
bru-3-RA 1..1269 761..2029 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:19:23 Download gff for LD31834.complete
Subject Subject Range Query Range Percent Splice Strand
bru-3-RA 1..1269 761..2029 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:20:17 Download gff for LD31834.complete
Subject Subject Range Query Range Percent Splice Strand
bru-3-RA 1..1269 761..2029 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:50:58 Download gff for LD31834.complete
Subject Subject Range Query Range Percent Splice Strand
bru-3-RA 1..1269 761..2029 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:22:58 Download gff for LD31834.complete
Subject Subject Range Query Range Percent Splice Strand
bru-3-RA 1..1269 761..2029 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:49:04 Download gff for LD31834.complete
Subject Subject Range Query Range Percent Splice Strand
bru-3-RA 1..2587 1..2587 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:19:23 Download gff for LD31834.complete
Subject Subject Range Query Range Percent Splice Strand
bru-3-RA 1..2587 1..2587 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:20:17 Download gff for LD31834.complete
Subject Subject Range Query Range Percent Splice Strand
bru-3-RA 1..2587 1..2587 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:50:58 Download gff for LD31834.complete
Subject Subject Range Query Range Percent Splice Strand
bru-3-RA 1..2587 1..2587 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:22:58 Download gff for LD31834.complete
Subject Subject Range Query Range Percent Splice Strand
bru-3-RA 1..2587 1..2587 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:28:24 Download gff for LD31834.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13541722..13541998 1271..1547 100 <- Minus
3L 13542075..13542218 1127..1270 100 <- Minus
3L 13584192..13584271 1047..1126 100 <- Minus
3L 13602342..13602476 912..1046 100 <- Minus
3L 13638517..13638565 863..911 100 <- Minus
3L 13651555..13651596 821..862 100 <- Minus
3L 13537937..13537996 2528..2587 100 <- Minus
3L 13538246..13538871 1902..2527 100 <- Minus
3L 13538943..13539119 1725..1901 100 <- Minus
3L 13540564..13540641 1647..1724 100 <- Minus
3L 13541489..13541587 1548..1646 100 <- Minus
3L 13664419..13664874 365..820 100 <- Minus
3L 13666386..13666749 1..364 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:28:24 Download gff for LD31834.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13541722..13541998 1271..1547 100 <- Minus
3L 13542075..13542218 1127..1270 100 <- Minus
3L 13584192..13584271 1047..1126 100 <- Minus
3L 13602342..13602476 912..1046 100 <- Minus
3L 13638517..13638565 863..911 100 <- Minus
3L 13651555..13651596 821..862 100 <- Minus
3L 13537937..13537996 2528..2587 100 <- Minus
3L 13538246..13538871 1902..2527 100 <- Minus
3L 13538943..13539119 1725..1901 100 <- Minus
3L 13540564..13540641 1647..1724 100 <- Minus
3L 13541489..13541587 1548..1646 100 <- Minus
3L 13664419..13664874 365..820 100 <- Minus
3L 13666386..13666749 1..364 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:28:24 Download gff for LD31834.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13541722..13541998 1271..1547 100 <- Minus
3L 13542075..13542218 1127..1270 100 <- Minus
3L 13584192..13584271 1047..1126 100 <- Minus
3L 13602342..13602476 912..1046 100 <- Minus
3L 13638517..13638565 863..911 100 <- Minus
3L 13651555..13651596 821..862 100 <- Minus
3L 13537937..13537996 2528..2587 100 <- Minus
3L 13538246..13538871 1902..2527 100 <- Minus
3L 13538943..13539119 1725..1901 100 <- Minus
3L 13540564..13540641 1647..1724 100 <- Minus
3L 13541489..13541587 1548..1646 100 <- Minus
3L 13664419..13664874 365..820 100 <- Minus
3L 13666386..13666749 1..364 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:20:17 Download gff for LD31834.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 13531037..13531096 2528..2587 100 <- Minus
arm_3L 13531346..13531971 1902..2527 100 <- Minus
arm_3L 13532043..13532219 1725..1901 100 <- Minus
arm_3L 13533664..13533741 1647..1724 100 <- Minus
arm_3L 13534589..13534687 1548..1646 100 <- Minus
arm_3L 13534822..13535098 1271..1547 100 <- Minus
arm_3L 13535175..13535318 1127..1270 100 <- Minus
arm_3L 13577292..13577371 1047..1126 100 <- Minus
arm_3L 13595442..13595576 912..1046 100 <- Minus
arm_3L 13631617..13631665 863..911 100 <- Minus
arm_3L 13644655..13644696 821..862 100 <- Minus
arm_3L 13657519..13657974 365..820 100 <- Minus
arm_3L 13659486..13659849 1..364 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:29:22 Download gff for LD31834.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13531037..13531096 2528..2587 100 <- Minus
3L 13659486..13659849 1..364 100   Minus
3L 13531346..13531971 1902..2527 100 <- Minus
3L 13532043..13532219 1725..1901 100 <- Minus
3L 13533664..13533741 1647..1724 100 <- Minus
3L 13534589..13534687 1548..1646 100 <- Minus
3L 13534822..13535098 1271..1547 100 <- Minus
3L 13535175..13535318 1127..1270 100 <- Minus
3L 13577292..13577371 1047..1126 100 <- Minus
3L 13595442..13595576 912..1046 100 <- Minus
3L 13631617..13631665 863..911 100 <- Minus
3L 13644655..13644696 821..862 100 <- Minus
3L 13657519..13657974 365..820 100 <- Minus

LD31834.pep Sequence

Translation from 760 to 2028

> LD31834.pep
MVHIIELVGQPKVEFAQQVTVSCHHPLIPPAIKLMNRALQLKPAENESRS
EHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFV
KFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGH
MNLLNPFVFNQFSPYGAYAQQQQQAALMAAAATAPGSAAAYMNPMAALAT
QIPHGLNGTGQPPSLPSPTMPNFNMGANTPNGQPGGAAAAAAAAAAADGV
FTNGIPQTAFPGHPLHLTIPPQGLPNGDAATLQHAFPGLPPFPGVAFPAV
YGQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGCNLFIYHLPQEFGD
AELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNG
FQIGMKRLKVQLKRPKDASRPY*

LD31834.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 15:10:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\bru-3-PA 422 GF10965-PA 1..422 1..422 2208 99.8 Plus
Dana\GF14192-PA 852 GF14192-PA 758..852 328..422 417 77.9 Plus
Dana\GF19661-PA 229 GF19661-PA 135..229 328..422 399 74.7 Plus
Dana\GF19660-PA 215 GF19660-PA 1..87 61..147 272 59.8 Plus
Dana\GF21392-PA 353 GF21392-PA 259..349 325..416 172 40.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 15:10:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\bru-3-PA 422 GG13757-PA 1..422 1..422 2212 100 Plus
Dere\GG23776-PA 837 GG23776-PA 744..837 328..422 405 76.8 Plus
Dere\GG23781-PA 163 GG23781-PA 69..163 328..422 387 74.7 Plus
Dere\GG23780-PA 646 GG23780-PA 381..490 35..147 339 58.4 Plus
Dere\GG17743-PA 353 GG17743-PA 259..349 325..416 172 40.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 15:10:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14684-PA 421 GH14684-PA 1..421 1..422 2175 98.6 Plus
Dgri\GH11642-PA 833 GH11642-PA 739..833 328..422 418 77.9 Plus
Dgri\GH11645-PA 791 GH11645-PA 697..791 328..422 393 73.7 Plus
Dgri\GH24423-PA 353 GH24423-PA 259..349 325..416 172 40.2 Plus
Dgri\GH12602-PA 511 GH12602-PA 424..509 332..416 172 46.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:46:41
Subject Length Description Subject Range Query Range Score Percent Strand
bru3-PA 422 CG43744-PA 1..422 1..422 2216 100 Plus
bru3-PE 408 CG43744-PE 1..408 1..422 2112 96.7 Plus
bru3-PH 416 CG43744-PH 1..416 1..422 2093 94.9 Plus
bru3-PO 403 CG43744-PO 14..403 33..422 2047 100 Plus
bru3-PN 403 CG43744-PN 14..403 33..422 2047 100 Plus
bru3-PC 396 CG43744-PC 1..396 1..422 2042 93.8 Plus
bru3-PD 382 CG43744-PD 1..382 1..422 1938 90.5 Plus
bru3-PG 390 CG43744-PG 1..390 1..422 1919 88.8 Plus
bru3-PI 384 CG43744-PI 1..384 1..422 1884 87.4 Plus
bru3-PB 363 CG43744-PB 1..363 1..422 1818 86 Plus
bru3-PM 370 CG43744-PM 1..370 1..422 1791 84.4 Plus
bru3-PF 337 CG43744-PF 1..337 1..422 1644 79.9 Plus
bru3-PL 345 CG43744-PL 1..345 1..422 1625 78.4 Plus
bru3-PK 331 CG43744-PK 1..331 1..422 1604 78.4 Plus
bru2-PK 737 CG43065-PK 365..737 35..422 705 45 Plus
bru2-PD 737 CG31761-PD 365..737 35..422 705 45 Plus
bru1-PK 573 CG31762-PK 190..573 35..422 658 44.1 Plus
bru1-PJ 573 CG31762-PJ 190..573 35..422 658 44.1 Plus
bru1-PI 573 CG31762-PI 190..573 35..422 658 44.1 Plus
bru1-PH 573 CG31762-PH 190..573 35..422 658 44.1 Plus
bru1-PE 604 CG31762-PE 221..604 35..422 658 44.1 Plus
bru1-PA 604 CG31762-PA 221..604 35..422 658 44.1 Plus
bru1-PG 810 CG31762-PG 427..810 35..422 658 44.1 Plus
bru1-PB 810 CG31762-PB 427..810 35..422 658 44.1 Plus
bru1-PF 620 CG31762-PF 221..620 35..422 657 42.6 Plus
bru2-PI 350 CG43065-PI 1..350 61..422 639 44.4 Plus
bru1-PD 361 CG31762-PD 1..361 61..422 595 43.5 Plus
bru2-PJ 651 CG43065-PJ 381..651 186..422 385 38.4 Plus
bru2-PH 651 CG43065-PH 381..651 186..422 385 38.4 Plus
bru2-PL 893 CG43065-PL 623..893 186..422 385 38.4 Plus
bru2-PE 893 CG31761-PE 623..893 186..422 385 38.4 Plus
bru2-PL 893 CG43065-PL 365..570 35..247 357 42.9 Plus
bru2-PE 893 CG31761-PE 365..570 35..247 357 42.9 Plus
bru2-PA 632 CG31761-PA 365..570 35..247 357 42.9 Plus
bru2-PM 664 CG43065-PM 365..570 35..247 357 42.9 Plus
bru2-PG 664 CG43065-PG 365..570 35..247 357 42.9 Plus
bru2-PJ 651 CG43065-PJ 139..328 54..247 323 42.9 Plus
bru2-PH 651 CG43065-PH 139..328 54..247 323 42.9 Plus
elav-PC 479 CG4262-PC 147..477 57..416 200 26.3 Plus
elav-PB 479 CG4262-PB 147..477 57..416 200 26.3 Plus
elav-PA 483 CG4262-PA 151..481 57..416 200 26.3 Plus
elav-PD 483 CG4262-PD 151..481 57..416 200 26.3 Plus
fne-PJ 353 CG4396-PJ 20..349 44..416 180 24.1 Plus
fne-PI 353 CG4396-PI 20..349 44..416 180 24.1 Plus
fne-PD 353 CG4396-PD 20..349 44..416 180 24.1 Plus
fne-PE 356 CG4396-PE 20..352 44..416 177 23.9 Plus
fne-PH 356 CG4396-PH 20..352 44..416 177 23.9 Plus
fne-PG 356 CG4396-PG 20..352 44..416 177 23.9 Plus
fne-PB 356 CG4396-PB 20..352 44..416 177 23.9 Plus
fne-PA 356 CG4396-PA 20..352 44..416 177 23.9 Plus
fne-PC 356 CG4396-PC 20..352 44..416 177 23.9 Plus
CG5213-PA 251 CG5213-PA 42..121 338..417 155 37.5 Plus
Rbp9-PH 439 CG3151-PH 111..192 338..419 155 37.8 Plus
Rbp9-PG 439 CG3151-PG 111..192 338..419 155 37.8 Plus
bru3-PJ 49 CG43744-PJ 1..36 1..50 152 72 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 15:10:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\bru-3-PA 611 GI13095-PA 1..408 1..409 2137 98.5 Plus
Dmoj\GI17944-PA 851 GI17944-PA 757..851 328..422 416 76.8 Plus
Dmoj\GI17947-PA 93 GI17947-PA 1..93 330..422 382 75.3 Plus
Dmoj\GI17946-PA 580 GI17946-PA 325..435 37..147 305 55 Plus
Dmoj\GI16282-PA 353 GI16282-PA 259..349 325..416 172 40.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 15:10:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21647-PA 458 GL21647-PA 1..458 1..422 1893 83.7 Plus
Dper\GL18624-PA 764 GL18624-PA 393..764 35..422 686 43.2 Plus
Dper\GL18622-PA 398 GL18622-PA 304..398 328..422 421 77.9 Plus
Dper\GL22975-PA 385 GL22975-PA 20..381 44..416 187 23.8 Plus
Dper\GL20165-PA 496 GL20165-PA 409..494 332..416 173 46.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 15:10:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\bru-3-PA 421 GA28624-PA 1..421 1..422 2178 98.6 Plus
Dpse\GA25725-PB 818 GA25725-PB 724..818 328..422 418 77.9 Plus
Dpse\GA25725-PC 595 GA25725-PC 501..595 328..422 417 77.9 Plus
Dpse\GA25731-PA 574 GA25731-PA 480..574 328..422 395 74.7 Plus
Dpse\GA25731-PA 574 GA25731-PA 1..87 61..147 277 59.8 Plus
Dpse\GA22283-PA 353 GA22283-PA 259..349 325..416 172 40.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 15:10:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\bru-3-PA 422 GM24582-PA 1..422 1..422 2212 100 Plus
Dsec\GM26763-PA 816 GM26763-PA 421..816 35..422 644 42.6 Plus
Dsec\GM26796-PA 163 GM26796-PA 69..163 328..422 390 74.7 Plus
Dsec\GM26785-PA 644 GM26785-PA 377..486 35..147 339 58.4 Plus
Dsec\GM11591-PA 379 GM11591-PA 285..375 325..416 172 40.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 15:10:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\bru-3-PA 616 GD12651-PA 220..616 32..422 1786 94.5 Plus
Dsim\GD23828-PA 821 GD23828-PA 430..821 39..422 644 42.8 Plus
Dsim\GD23834-PA 163 GD23834-PA 69..163 328..422 390 74.7 Plus
Dsim\GD23833-PA 245 GD23833-PA 1..87 61..147 274 59.8 Plus
Dsim\bru-3-PA 616 GD12651-PA 1..58 1..56 266 91.4 Plus
Dsim\GD16475-PA 466 GD16475-PA 379..464 332..416 173 46.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 15:10:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\bru-3-PA 421 GJ13842-PA 1..421 1..422 2175 98.6 Plus
Dvir\GJ17715-PA 831 GJ17715-PA 737..831 328..422 419 77.9 Plus
Dvir\GJ17718-PA 738 GJ17718-PA 644..738 328..422 396 74.7 Plus
Dvir\GJ17715-PA 831 GJ17715-PA 441..557 35..155 299 50 Plus
Dvir\elav-PA 516 GJ14725-PA 429..514 332..416 173 46.5 Plus
Dvir\GJ16518-PA 353 GJ16518-PA 259..349 325..416 172 40.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 15:10:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17101-PA 645 GK17101-PA 1..448 1..414 2124 90.9 Plus
Dwil\GK15495-PA 758 GK15495-PA 354..462 35..146 337 58.9 Plus
Dwil\GK15493-PA 866 GK15493-PA 449..563 35..151 299 49.2 Plus
Dwil\GK25647-PA 353 GK25647-PA 259..349 325..416 172 40.2 Plus
Dwil\GK16120-PA 509 GK16120-PA 422..507 332..416 172 46.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 15:10:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\bru-3-PA 422 GE20053-PA 1..422 1..422 2212 100 Plus
Dyak\GE18580-PA 830 GE18580-PA 737..830 328..422 404 76.8 Plus
Dyak\GE18585-PA 508 GE18585-PA 414..508 328..422 395 74.7 Plus
Dyak\GE18585-PA 508 GE18585-PA 1..87 61..147 274 59.8 Plus
Dyak\fne-PA 353 GE17033-PA 259..349 325..416 172 40.2 Plus
Dyak\GE16581-PA 478 GE16581-PA 391..476 332..416 172 46.5 Plus

LD31834.hyp Sequence

Translation from 760 to 2028

> LD31834.hyp
MVHIIELVGQPKVEFAQQVTVSCHHPLIPPAIKLMNRALQLKPAENESRS
EHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFV
KFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGH
MNLLNPFVFNQFSPYGAYAQQQQQAALMAAAATAPGSAAAYMNPMAALAT
QIPHGLNGTGQPPSLPSPTMPNFNMGANTPNGQPGGAAAAAAAAAAADGV
FTNGIPQTAFPGHPLHLTIPPQGLPNGDAATLQHAFPGLPPFPGVAFPAV
YGQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGCNLFIYHLPQEFGD
AELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNG
FQIGMKRLKVQLKRPKDASRPY*

LD31834.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:40:02
Subject Length Description Subject Range Query Range Score Percent Strand
bru-3-PA 422 CG43744-PA 1..422 1..422 2216 100 Plus
bru-3-PE 408 CG43744-PE 1..408 1..422 2112 96.7 Plus
bru-3-PH 416 CG43744-PH 1..416 1..422 2093 94.9 Plus
bru-3-PO 403 CG43744-PO 14..403 33..422 2047 100 Plus
bru-3-PN 403 CG43744-PN 14..403 33..422 2047 100 Plus