BDGP Sequence Production Resources |
Search the DGRC for LD32106
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 321 |
Well: | 6 |
Vector: | pOT2 |
Associated Gene/Transcript | RpS9-RB |
Protein status: | LD32106.pep: gold |
Preliminary Size: | 1050 |
Sequenced Size: | 915 |
Gene | Date | Evidence |
---|---|---|
CG3395 | 2001-01-01 | Release 2 assignment |
CG3395 | 2001-10-10 | Blastp of sequenced clone |
CG3395 | 2003-01-01 | Sim4 clustering to Release 3 |
RpS9 | 2008-04-29 | Release 5.5 accounting |
RpS9 | 2008-08-15 | Release 5.9 accounting |
RpS9 | 2008-12-18 | 5.12 accounting |
915 bp (915 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061396
> LD32106.complete CAAAACCTGCTCGGTTGAATTGTCGGAACCATGGTGAACGGCCGCATACC CTCGGTCTTCTCGAAGACCTACGTGACTCCCCGTCGCCCCTATGAGAAGG CGCGTCTGGACCAGGAGTTGAAGATCATCGGCGAGTATGGTCTGCGCAAC AAGCGCGAAGTGTGGCGCGTCAAGTACGCCCTGGCTAAGATCCGTAAGGC CGCTCGTGAGCTGCTGACCCTCGACGAGAAGGACGAGAAGCGTCTGTTCC AGGGTAATGCCCTGCTGCGCCGTCTGGTCCGTATCGGTGTCCTGGACGAG TCCCGCATGAAGCTCGATTACGTGCTGGGTCTGAAGATTGAGGACTTCTT GGAGCGTCGTCTGCAGACGCAGGTGTTCAAGCTGGGACTTGCCAAGTCCA TCCATCATGCTCGCGTCCTGATCCGTCAGCGTCACATTCGGTAAATATCG CTTGGACAGGCGACAACATCGTCGCCAGGCTCTCTCAGATATAAACTCTG TTCTGTTCAGTAAGACCACTTGGGAGTCGAACAGGCGCCAATGCTTGTAC CGACTCTCAACGTCTGTAGATTGCGCATGTGACTCCGTTCACACCAATCG AAAATGCAAAATGCCCGCCTAGCTGTCCGCAAGCAGGTGGTCAACATCCC GTCGTTCGTCGTGCGCCTGGACTCCCAGAAGCACATCGACTTCTCCCTGA AGTCGCCCTTCGGCGGCGGCCGTCCCGGTCGCGTCAAGAGGAAGAACCTG AAGAAGAACCAGGGCGGTGGCGGTGGAGCTGCTGAAGAGGAGGAGGACTA AGCAGTGGTAGCCAGCTGTAGCCAAGACAAATACATGGCGCAGACTTGAT AAAAATCCGTTTGCTTTACACAAATAAATGTAAAAATACACGAAAAAAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpS9-RB | 928 | RpS9-RB | 37..928 | 1..892 | 4460 | 100 | Plus |
RpS9-RA | 922 | RpS9-RA | 105..544 | 1..440 | 2200 | 100 | Plus |
RpS9-RD | 967 | RpS9-RD | 169..601 | 8..440 | 2165 | 100 | Plus |
RpS9-RA | 922 | RpS9-RA | 545..815 | 624..894 | 1355 | 100 | Plus |
RpS9-RD | 967 | RpS9-RD | 602..872 | 624..894 | 1355 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 9502147..9502517 | 623..253 | 1855 | 100 | Minus |
chr3L | 24539361 | chr3L | 9501755..9502023 | 892..624 | 1345 | 100 | Minus |
chr3L | 24539361 | chr3L | 9502917..9503166 | 257..8 | 1250 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 9503382..9503752 | 623..253 | 1855 | 100 | Minus |
3L | 28103327 | 3L | 9502988..9503258 | 894..624 | 1355 | 100 | Minus |
3L | 28103327 | 3L | 9504152..9504401 | 257..8 | 1250 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 9502921..9503166 | 8..253 | 100 | Minus | |
chr3L | 9501755..9502023 | 624..892 | 100 | <- | Minus |
chr3L | 9502147..9502516 | 254..623 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS9-RB | 1..414 | 31..444 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS9-RB | 1..414 | 31..444 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS9-RB | 1..414 | 31..444 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS9-RB | 1..414 | 31..444 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS9-RB | 1..414 | 31..444 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS9-RB | 37..928 | 1..892 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS9-RB | 37..928 | 1..892 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS9-RB | 26..917 | 1..892 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS9-RB | 37..928 | 1..892 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS9-RB | 26..917 | 1..892 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9509890..9510158 | 624..892 | 100 | <- | Minus |
3L | 9510282..9510651 | 254..623 | 100 | <- | Minus |
3L | 9511056..9511301 | 8..253 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9509890..9510158 | 624..892 | 100 | <- | Minus |
3L | 9510282..9510651 | 254..623 | 100 | <- | Minus |
3L | 9511056..9511301 | 8..253 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9509890..9510158 | 624..892 | 100 | <- | Minus |
3L | 9510282..9510651 | 254..623 | 100 | <- | Minus |
3L | 9511056..9511301 | 8..253 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 9502990..9503258 | 624..892 | 100 | <- | Minus |
arm_3L | 9503382..9503751 | 254..623 | 100 | <- | Minus |
arm_3L | 9504156..9504401 | 8..253 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9504156..9504401 | 8..253 | 100 | Minus | |
3L | 9502990..9503258 | 624..892 | 100 | <- | Minus |
3L | 9503382..9503751 | 254..623 | 100 | <- | Minus |
Translation from 30 to 443
> LD32106.pep MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYA LAKIRKAARELLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLG LKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24655-PA | 195 | GF24655-PA | 1..137 | 1..137 | 696 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14025-PA | 195 | GG14025-PA | 1..137 | 1..137 | 696 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15146-PA | 195 | GH15146-PA | 1..137 | 1..137 | 697 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpS9-PB | 137 | CG3395-PB | 1..137 | 1..137 | 685 | 100 | Plus |
RpS9-PE | 195 | CG3395-PE | 1..137 | 1..137 | 685 | 100 | Plus |
RpS9-PD | 195 | CG3395-PD | 1..137 | 1..137 | 685 | 100 | Plus |
RpS9-PA | 195 | CG3395-PA | 1..137 | 1..137 | 685 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12083-PA | 195 | GI12083-PA | 1..137 | 1..137 | 692 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20135-PA | 195 | GL20135-PA | 1..137 | 1..137 | 695 | 100 | Plus |
Dper\GL21280-PA | 195 | GL21280-PA | 1..137 | 1..137 | 695 | 100 | Plus |
Dper\GL17960-PA | 195 | GL17960-PA | 1..137 | 1..137 | 695 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28351-PA | 195 | GA28351-PA | 1..137 | 1..137 | 695 | 100 | Plus |
Dpse\GA29203-PA | 84 | GA29203-PA | 2..76 | 14..114 | 275 | 63.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24860-PA | 195 | GM24860-PA | 1..137 | 1..137 | 696 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12912-PA | 195 | GD12912-PA | 1..137 | 1..137 | 696 | 100 | Plus |
Dsim\GD17704-PA | 138 | GD17704-PA | 54..90 | 43..82 | 157 | 85 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13353-PA | 195 | GJ13353-PA | 1..137 | 1..137 | 696 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17575-PA | 195 | GK17575-PA | 1..137 | 1..137 | 696 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\RpS9-PA | 195 | GE21228-PA | 1..137 | 1..137 | 696 | 100 | Plus |
Translation from 30 to 443
> LD32106.hyp MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYA LAKIRKAARELLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLG LKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpS9-PB | 137 | CG3395-PB | 1..137 | 1..137 | 685 | 100 | Plus |
RpS9-PE | 195 | CG3395-PE | 1..137 | 1..137 | 685 | 100 | Plus |
RpS9-PD | 195 | CG3395-PD | 1..137 | 1..137 | 685 | 100 | Plus |
RpS9-PA | 195 | CG3395-PA | 1..137 | 1..137 | 685 | 100 | Plus |