BDGP Sequence Production Resources |
Search the DGRC for LD32220
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 322 |
Well: | 20 |
Vector: | pOT2 |
Associated Gene/Transcript | CG11263-RA |
Protein status: | LD32220.pep: gold |
Preliminary Size: | 862 |
Sequenced Size: | 1027 |
Gene | Date | Evidence |
---|---|---|
CG11263 | 2002-01-01 | Sim4 clustering to Release 2 |
CG11263 | 2002-05-18 | Blastp of sequenced clone |
CG11263 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11263 | 2008-04-29 | Release 5.5 accounting |
CG11263 | 2008-08-15 | Release 5.9 accounting |
CG11263 | 2008-12-18 | 5.12 accounting |
1027 bp (1027 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118948
> LD32220.complete CTTTTCAAAGCTTTTATTATCCGAAAAGCATAAATTACAATGAACAAGAG CGATGGAAACGAGAGCTTTGCTCTGGACAGTCTCCCGGAAAACATTCGTT ACCCTTTCGGAAAACGAGAACTGGAAATCCTGGAGAAGCAACTAGATCGA ATTGTTTTGATATACCAGGTGGATACCACATACCACAGTGCACTAAAGGA CATAAAGGATCAGAAGATCATATCGCTGCTGGTGGAGCCCAGTTTTTACG GACGACATCACCCCACGTCTATTTTGGTGGTAGCCACGTGCAATGGAACG TACATTTTCGACATCAAGGCCCTTGGCTTGATATTTCTGGAACTGGCCAA GATTCTGGAGGCGGATCAGCCGCGCAAGGTAATCCACTACAGCCACCGGA TCGCCGATCATCTGTTGCATAGGCAACGCATCTCGTTGGGAGGAATATTT GATACCTTTGTGGCTGTATGCCTGAGCAGCAACACAAGAATTCCGTACAC CTTGCCAGAGGCTATATCTCTCGTCTTCGGACTACCCATGGAGAAGGTGA CTGGAGGCTGTGAGTCGCAGCGTAACTTCACTGCTCGTCCACTGACCCAC AGTCAAATGAGATACTTGGCCAAGTTGGTCCAGCTTCAACACATAATGCA CGATCATTTGAATTATAGTCACATCTTTTGCGCCGAGGTTTATCGCATAT CCTTAGAGTTCAGCCACAGCTACTACGGCTTACGGTCCTGCGACGTCGCC ATAAACATGGCACCTGCCAGTAGCTTCGGGTTCCAACTCTTAGATTCATT CTGCAAAAAGGCCGACAAGGAACTCGAGCAGATCTAGGAGAGCACCAAAT GGGTCGCAAGGTAAGGGATTAGTTTGGCAGGAATGTAATGTAATAGCTTC TGCTGATATGTGTCTCATATATGCATATATGAGGTCAAGCATGATAGGTC AAGGGACTTGCATGATATGCTCTCTTATTAAATGAAAATTTTTTTTCTTA AAAGTTCTCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11263-RB | 1010 | CG11263-RB | 2..1010 | 1..1009 | 5045 | 100 | Plus |
CG11263-RA | 1058 | CG11263-RA | 76..1058 | 27..1009 | 4915 | 100 | Plus |
nc_12347.a | 120 | nc_12347.a | 26..120 | 46..140 | 475 | 100 | Plus |
CG11263-RA | 1058 | CG11263-RA | 2..29 | 1..28 | 140 | 100 | Plus |
nc_12347.a | 120 | nc_12347.a | 1..28 | 1..28 | 140 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 12997185..12998161 | 27..1009 | 4680 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 13006899..13007886 | 27..1014 | 4940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 12997111..12997138 | 1..28 | 100 | -> | Plus |
chr3L | 12997187..12998161 | 29..1009 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11263-RA | 1..798 | 40..837 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11263-RB | 1..798 | 40..837 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11263-RA | 1..798 | 40..837 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11263-RA | 1..798 | 40..837 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11263-RA | 1..798 | 40..837 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11263-RA | 2..29 | 1..28 | 100 | -> | Plus |
CG11263-RA | 78..1058 | 29..1009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11263-RB | 2..1010 | 1..1009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11263-RB | 9..1017 | 1..1009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11263-RA | 2..29 | 1..28 | 100 | -> | Plus |
CG11263-RA | 78..1058 | 29..1009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11263-RB | 9..1017 | 1..1009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 13006825..13006852 | 1..28 | 100 | -> | Plus |
3L | 13006901..13007881 | 29..1009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 13006825..13006852 | 1..28 | 100 | -> | Plus |
3L | 13006901..13007881 | 29..1009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 13006825..13006852 | 1..28 | 100 | -> | Plus |
3L | 13006901..13007881 | 29..1009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 12999925..12999952 | 1..28 | 100 | -> | Plus |
arm_3L | 13000001..13000981 | 29..1009 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 13000001..13000981 | 29..1009 | 100 | Plus | |
3L | 12999925..12999952 | 1..28 | 100 | -> | Plus |
Translation from 39 to 836
> LD32220.pep MNKSDGNESFALDSLPENIRYPFGKRELEILEKQLDRIVLIYQVDTTYHS ALKDIKDQKIISLLVEPSFYGRHHPTSILVVATCNGTYIFDIKALGLIFL ELAKILEADQPRKVIHYSHRIADHLLHRQRISLGGIFDTFVAVCLSSNTR IPYTLPEAISLVFGLPMEKVTGGCESQRNFTARPLTHSQMRYLAKLVQLQ HIMHDHLNYSHIFCAEVYRISLEFSHSYYGLRSCDVAINMAPASSFGFQL LDSFCKKADKELEQI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24627-PA | 293 | GF24627-PA | 1..272 | 1..262 | 672 | 53.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15614-PA | 235 | GG15614-PA | 24..217 | 76..264 | 760 | 74.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17078-PA | 276 | GH17078-PA | 8..267 | 5..253 | 553 | 47.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11263-PB | 265 | CG11263-PB | 1..265 | 1..265 | 1374 | 100 | Plus |
CG11263-PA | 265 | CG11263-PA | 1..265 | 1..265 | 1374 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11678-PA | 279 | GI11678-PA | 39..271 | 27..254 | 587 | 50.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18050-PA | 284 | GL18050-PA | 23..269 | 17..258 | 623 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22370-PA | 284 | GA22370-PA | 23..269 | 17..258 | 631 | 50.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25386-PA | 267 | GM25386-PA | 1..267 | 1..265 | 1275 | 91.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14419-PA | 267 | GD14419-PA | 1..267 | 1..265 | 1270 | 91 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11350-PA | 282 | GJ11350-PA | 16..276 | 4..256 | 620 | 49.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24824-PA | 352 | GK24824-PA | 1..167 | 1..163 | 421 | 50.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21941-PA | 274 | GE21941-PA | 1..271 | 1..264 | 1025 | 72.7 | Plus |
Translation from 39 to 836
> LD32220.hyp MNKSDGNESFALDSLPENIRYPFGKRELEILEKQLDRIVLIYQVDTTYHS ALKDIKDQKIISLLVEPSFYGRHHPTSILVVATCNGTYIFDIKALGLIFL ELAKILEADQPRKVIHYSHRIADHLLHRQRISLGGIFDTFVAVCLSSNTR IPYTLPEAISLVFGLPMEKVTGGCESQRNFTARPLTHSQMRYLAKLVQLQ HIMHDHLNYSHIFCAEVYRISLEFSHSYYGLRSCDVAINMAPASSFGFQL LDSFCKKADKELEQI*