Clone LD32364 Report

Search the DGRC for LD32364

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:323
Well:64
Vector:pOT2
Associated Gene/TranscriptCG8949-RA
Protein status:LD32364.pep: gold
Sequenced Size:4533

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8949 2003-01-01 Sim4 clustering to Release 3
CG8949 2008-04-29 Release 5.5 accounting
CG8949 2008-08-15 Release 5.9 accounting
CG8949 2008-12-18 5.12 accounting

Clone Sequence Records

LD32364.complete Sequence

4533 bp (4533 high quality bases) assembled on 2005-10-24

GenBank Submission: BT023944

> LD32364.complete
GCAAACTCAACACAGCCGTGCCGACGAACAGACCGCACAAAGCGTAATGC
AAAAGAATTGAAAAAAATCATCAAGTATAGAGGCCAAAAAGCGAACACAG
CAAGTCGGCATATAATTAAACAATTGTCGTTCAATGCTGAGCAAATAAAT
GCGGCGATTGCAGCCCAGCAAAGAAGGCGAGCGGCAAATTGCGAATTGCG
GAGGCAGCAAAATAAGCCGATAATAAGGCGACCGCAATTCAGGCACACAT
ATACGCCACACAAACACCGAGTCAGCGGGCCACACAGACGAAAAGCACAC
ACACACACATGCCACTGAGAGCCTCCCATACAAGCAGACCACAACACACA
CACACACACATACAAGCGAGCGTGCCTTGGCAGGTGAGAAGAAGAAGAGG
AAGCGGTGGAGGCAAAAGGAGGAGCAAACAGGAGGCGCCAAAGGCCCCAG
AATATTGGATAAAATCGGAATAAGGCTGCATTATCTTCTCCACGAGAAGA
GGAAGCAGCAGCAGCACTACCAGCAACAGCAGTCGACGAAGGAGAAGAGG
AAGCAGACGCATAAGCAGCAGCAGCAGCAGCAGCAGCGGAAGAAGCAGCA
GCAGGAGGAGGAGCAGGAGAGAGAGGGAAAACCAACAGAAGCAGCAGCAG
CGTATTTGGCGAAAAACTTGCATTGATGGTAATGCATGCTAGAAAACCGC
AGCGTATGAACGATGGGTACTTTGAGAAGCATACCAGTCACACATCATAC
CAGAGCTCAAAGTACAGCAGTTCAAAGCGCGACTACGAACGCGATCGTTC
CTCCAATTATCGCGATCGTGACCTGTCGCCAGGCGCTGGCGGTGGAGGAG
GCGGCGGATCCGCTGGAGGAGGTGGCGGCGGTAGCGGAAATGGCGGCGGA
CCATTGAACAATGGCAACAGCTACCGCTCCCAGTCGCCGGACATTGATTC
GCCGTCGTCCCGTTCGCACGATCTGCGCGACCGCAGCGATCATCGGGGCG
GAGGTGGCGGCAATGGGCGTGGCGGCAGTGGCGAGCGGTACAGCTTTATG
CAGAAGATGCGAGATCGAGATCGGGATGTCTACAAGAAGGATAAATATTC
AGATAAACGTGATCGGCGTGGCAACGATCGCGATTCGGAGTCGTCGTATC
GCACCAACCATGATAGGGATCGTCGTGGCGGAGGAGGCAGCGGAGGCGGC
AGCGGCAAGCTCTGCTCCTCGCGGGAGAACGACAAACGATCCGGGTCCGA
CGATCGCGATCGAGATCGGGATCGAGATCTGCGCGACTTGCGCGACAAGC
GGGACCGCGGTTCCGATCGCGACAGGGACATGTACAAGAAGGACAAGTAC
GCAGACAAACGAGAGCGCAGCGATCGCGGCGAACGGACGGCGCGTTATGG
CGACTGGAGCGAGCATGTCAGCTCATCAGGCAAAATGTATTATTACAACT
GCAAGACGGAAATCTCTCAGTGGGAGAAGCCAAAGGAATGGGTGGACAGA
GAAAGAAATTTGCCGCGCGATCAGCATCGTGAGAAGGATTATCGTGACAA
GGATCGCGATCGCGACCGCGATGATCGTTTCTCCAGATCAACATACAAAC
ATTCCAATTCTTCGCGGGACAATTCACGACTGAGATGGAATTACGACAAC
GATGGCGGTCCGCCCAGTCATCGAAGGCGTTTGGATGGTCGACACAACGA
CAATGCTGACATGGATATAAGCGGCGACTCGACGCCTACCTCGGAAGCCA
GTTACTCGCTAAGCGGCACGCCCACCACACACGGCGGCGGTCCGGGCGGA
GGCGGTCCCGGAGGCGGCGGCGGTAGCAACAGCGATCAGCCAATGGGCAA
TGCCCTGCCTCGTTTGTCCTCCCACCCAACTGCCAACTCCTCCGCATCCG
TGGCGACGGGCACAGGTGCGACGGGGGGACTGCACTACGGCAGCGGAACG
GGCGGTGGCCCGGTGACGGGCGCCACAATGCTGCCCACCATGTCGGGAAT
GCTGAACAGCAACAGCAGCAACAGTGCCGGCGGCAGCAGCAGCAATGCCA
GCAGCAGCAGTCTGAGGAACTCCGTTGTCGGTCACATTGGCTCCACATCT
GGCACGACTGTGCCCACACTGGGAAGTCAGGATCCGCACCAGCATCATCT
GAACTCGAATGCTCCACTGCCACCGGGTGCCAAGGGCAAGGATCAGGCGC
TGCTGATGCGCCAGAAGATGCACCTGGGCCTGGGCGTCCTCGATGTACAA
TCACATCACGGCGTTAACTCGGTTGGTTCGGTGTCAGATGGGACCAATCA
CGCCTACAATTCGGTCAATAACTCGGTCTCCGGCAGCTTACGGGACAACA
GCGTAAACTCGCCGTTGTATATGCACCACAGCATGTCGCCCTCGTTGAAC
TTCACCAAGAGTCCCATACCGACGATTGTGGGCCACACGAACAACATGAG
CATCGCCTACACCTGCAATCCACCCTTTGGCCTCAAGGCTACCCTCGATG
GCGGAGTGATGGTGGCGAATGCCTCACCGGCCACGCCCGGTGGCAACGCC
TCCTCCGGCTCCAGTGGAGCGAATAGCAGCCAAAGCATCGTGCCCGGCAT
GGGCCCCGTCTGCGGAATCAGTGTGATCACCTCGATGGGCAGCAACAGCG
GCACGCTATGCGAAGGACCGCCTACGCCCACCCAGGAGCTGGATTTGAGC
GGCTCGGCGTTGGAGCAGCAACAGTTGGCCGCCGCAGCGGCAGCCGCGAC
AGCGTCAAGCCTCCAGCTACAGGCGGCGCAACAGGCCCAGCAGCAGCGGA
AATTGGATGGGACGTCGTCGGCCACGCTGAGCTCACTGCAGAGCTGCGTG
AGTTCCTCAGGACAGGCGGCAAACCTACGTGGTCCCGAGATTTCGCCAAA
GCTGGCCAAATACTTCCGCGCCGATCTGATCGCGCATGTGACCAATTGGC
ACGCGGAGGTGCTGGAGCGTCAGGCGCAGAAGTGCTGTGAGGATACGCAC
CTGTTTGGCGACATAACGTGCACGAGGATATGCGCGGAATTGAAGTGCGC
CCGCAGCCTGGTGCGAAGCACCGAAATCAATGCCACCCTGCAGGAACAAA
AAATTATGTATTTACGCCACCAGATCCGCCGTATCGAGGAGTCGAAGACT
CAGAACGCGTTCATGTCAGACGATACTTAGGATCAGGAGCAGGTTAGGCT
GCGCGTACATCGCAAGCTGTCTGTTAGGCTCAAAAAGAGCTTCTTCTGGC
GCAGCTGATGATGATTGCGATGATGATTGGTCGATTGTGGCCGCCGTCAG
CAGCTTGTCCTCGTTTAGCAGGCCCGGATCCAACCCTATTTATTGAGGGC
ATCTGGAAATGGCTTAGATGATGACGACGACTGGCGGTGGCCCACGACAA
TGACTGAGAAACCGCGTGCATCCTGCTCCATCCTCTTACTTCTCTCCTCT
GGGCGACGCATCTCTCCCCACCACCACAACCAGCCCGCGATTCACTTGTG
TTCGGATCGAGTTCCAGTCCCCAACCGACTATATAGTGGCAGTATGTAAC
TGGCTGAGCGGACTGCATGGACTTGGCACAGGACAAATCAGGATAAATCA
ACCAACAGCTGCAACAAGAACTTCAACAAGAAACACAAAAACTAAAACAT
AATTTATAATTAGCAAAGCGTAAATTAAAAGCAAAAATAAACTAAAATAA
GCATTGCATTAAGCAAGACGGAGGAAAAGCCAGAGAAATAGCCACAAATA
AAATACAACACCATTCAAGATAACTACAAAAGAAGAATACAGCCAACAGC
CGACCTATCAAGATCAAGAAGCAATATGGATAAAGCCTCGTATCGAATCG
AATCGAAAGAAACAAAACAAAACAAAAGGATAAACAAACGAAATAGGATC
AACAACACCAGCAAAGCAACAACACCAACAAAAAACAAGTCAACATAGTA
TACTCAACTGCAATAAAAAGCTAATTAAACTATATACAAATTATATATAA
ACAAATATATATAAATAGAGTATATGAAAGAGTGTATATTTACATCCACC
TAACATAAATACGGAGGATAAATCATGATGATAAAATGATTACGATGACA
ACCAAAATGCGAGTCAAGTCGAACCGAATGCACGCTTCTCGGGACGAGGA
AATCGACAATTTTATATATATATATTTATTTGTATATATATTATTTATAG
GTTTGGCAGCCACCACACTTCCCACATTTATTTTTACAGTGCGATCGAAA
TGTTTGTTTAATCTGCTGATCATCGGCTTGGTATCCTGCTAATTGGTGCA
GAATTTATATCTTGTTTTGTAGTTATTTACCGATTACAATTCATGTTTTT
TATTTTAAAACTATAAGCATAAAAATTTATATTTACAACACACCATATTC
TTTAACCTCCGATTCAAATTGCAGATAGATTTGTTTTAGTTTAGTTTTTT
TTTGTATGCACTACATTAATGTCTTTATGATATATGATCGTATATATATA
TATATATTTTATTATAAAAAAAAAAAAAAAAAA

LD32364.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:26:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG8949.a 4754 CG8949.a 1..4516 1..4516 22580 100 Plus
CG8949-RA 4602 CG8949-RA 88..4602 1..4515 22575 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:05:42
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 16958525..16959944 4515..3102 6975 99.6 Minus
chrX 22417052 chrX 16966440..16966959 719..200 2585 99.8 Minus
chrX 22417052 chrX 16960500..16960961 2803..2342 2310 100 Minus
chrX 22417052 chrX 16961331..16961747 2103..1687 2070 99.8 Minus
chrX 22417052 chrX 16962776..16963127 1102..751 1760 100 Minus
chrX 22417052 chrX 16962459..16962712 1354..1101 1270 100 Minus
chrX 22417052 chrX 16961022..16961261 2343..2104 1200 100 Minus
chrX 22417052 chrX 16967198..16967398 201..1 1005 100 Minus
chrX 22417052 chrX 16960258..16960428 2974..2804 840 99.4 Minus
chrX 22417052 chrX 16960014..16960143 3101..2972 650 100 Minus
chrX 22417052 chrX 16961804..16961901 1689..1592 490 100 Minus
chrX 22417052 chrX 16961967..16962054 1591..1504 440 100 Minus
chrX 22417052 chrX 16962162..16962241 1505..1426 400 100 Minus
chrX 22417052 chrX 16962302..16962379 1430..1353 390 100 Minus
chrX 22417052 chrX 16965465..16965502 753..716 190 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:26:21 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:05:39
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17069017..17070431 4516..3102 7075 100 Minus
X 23542271 X 17076922..17077441 719..200 2600 100 Minus
X 23542271 X 17070987..17071448 2803..2342 2310 100 Minus
X 23542271 X 17071818..17072234 2103..1687 2085 100 Minus
X 23542271 X 17073263..17073614 1102..751 1760 100 Minus
X 23542271 X 17072946..17073199 1354..1101 1270 100 Minus
X 23542271 X 17071509..17071748 2343..2104 1200 100 Minus
X 23542271 X 17077680..17077880 201..1 1005 100 Minus
X 23542271 X 17070745..17070915 2974..2804 855 100 Minus
X 23542271 X 17070501..17070630 3101..2972 650 100 Minus
X 23542271 X 17072291..17072388 1689..1592 490 100 Minus
X 23542271 X 17072454..17072541 1591..1504 440 100 Minus
X 23542271 X 17072649..17072728 1505..1426 400 100 Minus
X 23542271 X 17072789..17072866 1430..1353 390 100 Minus
X 23542271 X 17075953..17075990 753..716 190 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:18:05
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 17077115..17078529 4516..3102 7075 100 Minus
X 23527363 X 17085020..17085539 719..200 2600 100 Minus
X 23527363 X 17079085..17079546 2803..2342 2310 100 Minus
X 23527363 X 17079916..17080332 2103..1687 2085 100 Minus
X 23527363 X 17081361..17081712 1102..751 1760 100 Minus
X 23527363 X 17081044..17081297 1354..1101 1270 100 Minus
X 23527363 X 17079607..17079846 2343..2104 1200 100 Minus
X 23527363 X 17085778..17085978 201..1 1005 100 Minus
X 23527363 X 17078843..17079013 2974..2804 855 100 Minus
X 23527363 X 17078599..17078728 3101..2972 650 100 Minus
X 23527363 X 17080389..17080486 1689..1592 490 100 Minus
X 23527363 X 17080552..17080639 1591..1504 440 100 Minus
X 23527363 X 17080747..17080826 1505..1426 400 100 Minus
X 23527363 X 17080887..17080964 1430..1353 390 100 Minus
X 23527363 X 17084051..17084088 753..716 190 100 Minus
Blast to na_te.dros performed 2019-03-16 11:05:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6731..6887 491..651 290 67.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6703..6875 475..651 281 63.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6777..6923 504..651 277 67.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6723..6863 504..651 273 68.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6715..6900 469..649 269 62.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6757..7072 475..793 263 56.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6723..6952 420..650 243 58.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2311..2463 504..651 240 64.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2254..2505 401..651 207 55.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2337..2495 490..653 203 61.6 Plus
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 6692..7218 3602..4118 202 53.2 Plus
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 6693..7115 3682..4116 199 55.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2745..2902 500..649 195 61.4 Plus
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 6694..6860 3631..3798 188 60.8 Plus
roo 9092 roo DM_ROO 9092bp 1048..1163 472..587 184 62.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2266..2539 358..649 182 56.2 Plus
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 6699..7016 3731..4063 179 55.1 Plus
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 6706..7077 3725..4108 179 56.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2751..2871 488..602 175 66.4 Plus
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 6671..6860 3643..3826 169 60.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6846..6944 504..602 161 65 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2842..2989 504..646 150 60.4 Plus
HMS-Beagle 7062 HMS-Beagle Beagle 7062bp 846..985 498..640 149 58 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2455..2535 504..584 134 65.9 Plus
McClintock 6450 McClintock McCLINTOCK 6450bp 1815..2012 3619..3808 130 57.3 Plus
McClintock 6450 McClintock McCLINTOCK 6450bp 919..1166 4510..4278 124 56.3 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2617..2655 549..587 123 79.5 Plus
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 6300..6421 4320..4429 122 62.3 Plus

LD32364.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:06:39 Download gff for LD32364.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 16967199..16967398 1..200 100   Minus
chrX 16960014..16960141 2974..3101 100 <- Minus
chrX 16960259..16960428 2804..2973 99 <- Minus
chrX 16960500..16960960 2343..2803 100 <- Minus
chrX 16961023..16961261 2104..2342 100 <- Minus
chrX 16961331..16961373 2061..2103 100 == Minus
chrX 16961428..16961599 1835..2006 100 == Minus
chrX 16961653..16961746 1688..1781 98 <- Minus
chrX 16961806..16961901 1592..1687 100 <- Minus
chrX 16961967..16962052 1506..1591 100 <- Minus
chrX 16962162..16962237 1430..1505 100 <- Minus
chrX 16962303..16962377 1355..1429 100 <- Minus
chrX 16962459..16962710 1103..1354 100 <- Minus
chrX 16962776..16962978 900..1102 100 == Minus
chrX 16963047..16963124 754..831 100 <- Minus
chrX 16965465..16965501 717..753 100 <- Minus
chrX 16966443..16966542 617..716 100 == Minus
chrX 16966596..16966794 365..563 100 == Minus
chrX 16966864..16966958 201..295 98 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:13:54 Download gff for LD32364.complete
Subject Subject Range Query Range Percent Splice Strand
CG8949-RA 1..2505 676..3180 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:47:34 Download gff for LD32364.complete
Subject Subject Range Query Range Percent Splice Strand
CG8949-RD 1..2505 676..3180 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 11:30:46 Download gff for LD32364.complete
Subject Subject Range Query Range Percent Splice Strand
CG8949-RG 1..2583 676..3258 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:29:01 Download gff for LD32364.complete
Subject Subject Range Query Range Percent Splice Strand
CG8949-RA 1..2505 676..3180 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:26:10 Download gff for LD32364.complete
Subject Subject Range Query Range Percent Splice Strand
CG8949-RG 1..2583 676..3258 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:20:45 Download gff for LD32364.complete
Subject Subject Range Query Range Percent Splice Strand
CG8949-RA 1..4515 1..4515 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:47:34 Download gff for LD32364.complete
Subject Subject Range Query Range Percent Splice Strand
CG8949-RD 18..4532 1..4515 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:30:46 Download gff for LD32364.complete
Subject Subject Range Query Range Percent Splice Strand
CG8949-RA 18..4532 1..4515 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:29:01 Download gff for LD32364.complete
Subject Subject Range Query Range Percent Splice Strand
CG8949-RA 1..4515 1..4515 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:26:10 Download gff for LD32364.complete
Subject Subject Range Query Range Percent Splice Strand
CG8949-RA 18..4532 1..4515 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:06:39 Download gff for LD32364.complete
Subject Subject Range Query Range Percent Splice Strand
X 17071510..17071748 2104..2342 100 <- Minus
X 17069018..17070431 3102..4515 100 <- Minus
X 17070501..17070628 2974..3101 100 <- Minus
X 17070746..17070915 2804..2973 100 <- Minus
X 17070987..17071447 2343..2803 100 <- Minus
X 17071818..17072233 1688..2103 100 <- Minus
X 17072293..17072388 1592..1687 100 <- Minus
X 17072454..17072539 1506..1591 100 <- Minus
X 17072649..17072724 1430..1505 100 <- Minus
X 17072790..17072864 1355..1429 100 <- Minus
X 17072946..17073197 1103..1354 100 <- Minus
X 17073263..17073611 754..1102 100 <- Minus
X 17075953..17075989 717..753 100 <- Minus
X 17076925..17077440 201..716 100 <- Minus
X 17077681..17077880 1..200 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:06:39 Download gff for LD32364.complete
Subject Subject Range Query Range Percent Splice Strand
X 17071510..17071748 2104..2342 100 <- Minus
X 17069018..17070431 3102..4515 100 <- Minus
X 17070501..17070628 2974..3101 100 <- Minus
X 17070746..17070915 2804..2973 100 <- Minus
X 17070987..17071447 2343..2803 100 <- Minus
X 17071818..17072233 1688..2103 100 <- Minus
X 17072293..17072388 1592..1687 100 <- Minus
X 17072454..17072539 1506..1591 100 <- Minus
X 17072649..17072724 1430..1505 100 <- Minus
X 17072790..17072864 1355..1429 100 <- Minus
X 17072946..17073197 1103..1354 100 <- Minus
X 17073263..17073611 754..1102 100 <- Minus
X 17075953..17075989 717..753 100 <- Minus
X 17076925..17077440 201..716 100 <- Minus
X 17077681..17077880 1..200 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:06:39 Download gff for LD32364.complete
Subject Subject Range Query Range Percent Splice Strand
X 17071510..17071748 2104..2342 100 <- Minus
X 17069018..17070431 3102..4515 100 <- Minus
X 17070501..17070628 2974..3101 100 <- Minus
X 17070746..17070915 2804..2973 100 <- Minus
X 17070987..17071447 2343..2803 100 <- Minus
X 17071818..17072233 1688..2103 100 <- Minus
X 17072293..17072388 1592..1687 100 <- Minus
X 17072454..17072539 1506..1591 100 <- Minus
X 17072649..17072724 1430..1505 100 <- Minus
X 17072790..17072864 1355..1429 100 <- Minus
X 17072946..17073197 1103..1354 100 <- Minus
X 17073263..17073611 754..1102 100 <- Minus
X 17075953..17075989 717..753 100 <- Minus
X 17076925..17077440 201..716 100 <- Minus
X 17077681..17077880 1..200 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:30:46 Download gff for LD32364.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 16966979..16967230 1103..1354 100 <- Minus
arm_X 16966326..16966421 1592..1687 100 <- Minus
arm_X 16966487..16966572 1506..1591 100 <- Minus
arm_X 16966682..16966757 1430..1505 100 <- Minus
arm_X 16963051..16964464 3102..4515 100 <- Minus
arm_X 16964534..16964661 2974..3101 100 <- Minus
arm_X 16964779..16964948 2804..2973 100 <- Minus
arm_X 16965020..16965480 2343..2803 100 <- Minus
arm_X 16965543..16965781 2104..2342 100 <- Minus
arm_X 16965851..16966266 1688..2103 100 <- Minus
arm_X 16966823..16966897 1355..1429 100 <- Minus
arm_X 16967296..16967644 754..1102 100 <- Minus
arm_X 16969986..16970022 717..753 100 <- Minus
arm_X 16970958..16971473 201..716 100 <- Minus
arm_X 16971714..16971913 1..200 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:07:28 Download gff for LD32364.complete
Subject Subject Range Query Range Percent Splice Strand
X 17081044..17081295 1103..1354 100 <- Minus
X 17079916..17080331 1688..2103 100 <- Minus
X 17080391..17080486 1592..1687 100 <- Minus
X 17080552..17080637 1506..1591 100 <- Minus
X 17077116..17078529 3102..4515 100 <- Minus
X 17078599..17078726 2974..3101 100 <- Minus
X 17078844..17079013 2804..2973 100 <- Minus
X 17079085..17079545 2343..2803 100 <- Minus
X 17079608..17079846 2104..2342 100 <- Minus
X 17080747..17080822 1430..1505 100 <- Minus
X 17080888..17080962 1355..1429 100 <- Minus
X 17081361..17081709 754..1102 100 <- Minus
X 17084051..17084087 717..753 100 <- Minus
X 17085023..17085538 201..716 100 <- Minus
X 17085779..17085978 1..200 100   Minus

LD32364.pep Sequence

Translation from 675 to 3179

> LD32364.pep
MVMHARKPQRMNDGYFEKHTSHTSYQSSKYSSSKRDYERDRSSNYRDRDL
SPGAGGGGGGGSAGGGGGGSGNGGGPLNNGNSYRSQSPDIDSPSSRSHDL
RDRSDHRGGGGGNGRGGSGERYSFMQKMRDRDRDVYKKDKYSDKRDRRGN
DRDSESSYRTNHDRDRRGGGGSGGGSGKLCSSRENDKRSGSDDRDRDRDR
DLRDLRDKRDRGSDRDRDMYKKDKYADKRERSDRGERTARYGDWSEHVSS
SGKMYYYNCKTEISQWEKPKEWVDRERNLPRDQHREKDYRDKDRDRDRDD
RFSRSTYKHSNSSRDNSRLRWNYDNDGGPPSHRRRLDGRHNDNADMDISG
DSTPTSEASYSLSGTPTTHGGGPGGGGPGGGGGSNSDQPMGNALPRLSSH
PTANSSASVATGTGATGGLHYGSGTGGGPVTGATMLPTMSGMLNSNSSNS
AGGSSSNASSSSLRNSVVGHIGSTSGTTVPTLGSQDPHQHHLNSNAPLPP
GAKGKDQALLMRQKMHLGLGVLDVQSHHGVNSVGSVSDGTNHAYNSVNNS
VSGSLRDNSVNSPLYMHHSMSPSLNFTKSPIPTIVGHTNNMSIAYTCNPP
FGLKATLDGGVMVANASPATPGGNASSGSSGANSSQSIVPGMGPVCGISV
ITSMGSNSGTLCEGPPTPTQELDLSGSALEQQQLAAAAAAATASSLQLQA
AQQAQQQRKLDGTSSATLSSLQSCVSSSGQAANLRGPEISPKLAKYFRAD
LIAHVTNWHAEVLERQAQKCCEDTHLFGDITCTRICAELKCARSLVRSTE
INATLQEQKIMYLRHQIRRIEESKTQNAFMSDDT*

LD32364.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:44:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21829-PA 868 GF21829-PA 16..868 26..834 2599 78.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:44:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18206-PA 868 GG18206-PA 58..868 25..834 4084 96.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:44:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24503-PA 1091 GH24503-PA 200..825 27..609 1511 68.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:16:47
Subject Length Description Subject Range Query Range Score Percent Strand
wcy-PG 860 CG8949-PG 1..834 1..834 4423 100 Plus
wcy-PD 834 CG8949-PD 1..834 1..834 4423 100 Plus
wcy-PA 834 CG8949-PA 1..834 1..834 4423 100 Plus
wcy-PE 838 CG8949-PE 1..838 1..834 4408 99.5 Plus
wcy-PC 832 CG8949-PC 1..832 1..834 4401 99.8 Plus
wcy-PF 876 CG8949-PF 68..876 26..834 4280 99.9 Plus
Caper-PB 594 CG11266-PB 6..209 36..238 206 33 Plus
Caper-PA 594 CG11266-PA 6..209 36..238 206 33 Plus
CG12075-PD 994 CG12075-PD 589..988 4..419 200 24.9 Plus
CG12075-PE 1006 CG12075-PE 601..1000 4..419 200 24.9 Plus
CG12075-PC 1006 CG12075-PC 601..1000 4..419 200 24.9 Plus
CG12075-PB 1006 CG12075-PB 601..1000 4..419 200 24.9 Plus
CG12075-PA 1006 CG12075-PA 601..1000 4..419 200 24.9 Plus
Mur89F-PC 2158 CG4090-PC 552..1223 20..748 195 17.5 Plus
Mur89F-PB 2159 CG4090-PB 552..1223 20..748 195 17.5 Plus
CG6340-PB 513 CG6340-PB 33..358 88..454 190 25.2 Plus
CG4887-PB 1004 CG4887-PB 1..246 90..335 180 28.8 Plus
CG4887-PA 1004 CG4887-PA 1..246 90..335 180 28.8 Plus
CG30122-PD 1271 CG30122-PD 898..1096 6..197 173 30.8 Plus
CG30122-PB 1271 CG30122-PB 898..1096 6..197 173 30.8 Plus
CG30122-PC 1272 CG30122-PC 898..1096 6..197 173 30.8 Plus
snRNP-U1-70K-PC 448 CG8749-PC 192..395 64..315 167 27.9 Plus
snRNP-U1-70K-PA 448 CG8749-PA 192..395 64..315 167 27.9 Plus
BOD1-PC 1109 CG5514-PC 581..827 181..418 167 24.3 Plus
BOD1-PA 1109 CG5514-PA 581..827 181..418 167 24.3 Plus
BOD1-PD 1150 CG5514-PD 581..827 181..418 167 24.3 Plus
BOD1-PB 1150 CG5514-PB 581..827 181..418 167 24.3 Plus
BOD1-PE 1151 CG5514-PE 581..827 181..418 167 24.3 Plus
ncm-PA 1330 CG12750-PA 1051..1324 4..304 167 27 Plus
CG9915-PC 820 CG9915-PC 79..453 26..386 166 23.9 Plus
CG9915-PB 820 CG9915-PB 79..453 26..386 166 23.9 Plus
caz-PD 355 CG3606-PD 205..353 53..217 164 32.2 Plus
caz-PC 384 CG3606-PC 234..382 53..217 164 32.2 Plus
caz-PB 399 CG3606-PB 249..397 53..217 164 32.2 Plus
SF1-PC 323 CG5836-PC 27..158 172..342 162 31 Plus
SF1-PB 347 CG5836-PB 27..158 172..342 162 31 Plus
SF1-PA 787 CG5836-PA 27..158 172..342 162 31 Plus
sbb-PE 929 CG5580-PE 303..622 353..691 161 27.2 Plus
sbb-PC 929 CG5580-PC 303..622 353..691 161 27.2 Plus
sbb-PF 939 CG5580-PF 313..632 353..691 161 27.2 Plus
sbb-PH 2302 CG5580-PH 303..622 353..691 161 27.2 Plus
sbb-PD 2302 CG5580-PD 303..622 353..691 161 27.2 Plus
sbb-PG 2312 CG5580-PG 313..632 353..691 161 27.2 Plus
sbb-PJ 2330 CG5580-PJ 313..632 353..691 161 27.2 Plus
CG4000-PA 263 CG4000-PA 141..218 53..121 156 47.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:44:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15829-PA 1023 GI15829-PA 170..1023 27..834 2420 72.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:44:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18298-PA 922 GL18298-PA 65..922 27..834 2260 73 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:44:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA27402-PA 944 GA27402-PA 87..944 27..834 2259 72.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:44:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13344-PA 676 GM13344-PA 68..586 26..544 2672 99.4 Plus
Dsec\GM13344-PA 676 GM13344-PA 598..676 710..788 378 96.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:44:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15705-PA 723 GD15705-PA 68..613 26..569 2741 97.4 Plus
Dsim\GD15705-PA 723 GD15705-PA 622..723 733..834 579 99 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:44:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18682-PA 893 GJ18682-PA 71..893 27..834 2487 74.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:44:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25612-PA 1041 GK25612-PA 94..1041 22..834 2174 63.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:44:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15624-PA 879 GE15624-PA 74..879 26..834 2976 91.5 Plus

LD32364.hyp Sequence

Translation from 675 to 3179

> LD32364.hyp
MVMHARKPQRMNDGYFEKHTSHTSYQSSKYSSSKRDYERDRSSNYRDRDL
SPGAGGGGGGGSAGGGGGGSGNGGGPLNNGNSYRSQSPDIDSPSSRSHDL
RDRSDHRGGGGGNGRGGSGERYSFMQKMRDRDRDVYKKDKYSDKRDRRGN
DRDSESSYRTNHDRDRRGGGGSGGGSGKLCSSRENDKRSGSDDRDRDRDR
DLRDLRDKRDRGSDRDRDMYKKDKYADKRERSDRGERTARYGDWSEHVSS
SGKMYYYNCKTEISQWEKPKEWVDRERNLPRDQHREKDYRDKDRDRDRDD
RFSRSTYKHSNSSRDNSRLRWNYDNDGGPPSHRRRLDGRHNDNADMDISG
DSTPTSEASYSLSGTPTTHGGGPGGGGPGGGGGSNSDQPMGNALPRLSSH
PTANSSASVATGTGATGGLHYGSGTGGGPVTGATMLPTMSGMLNSNSSNS
AGGSSSNASSSSLRNSVVGHIGSTSGTTVPTLGSQDPHQHHLNSNAPLPP
GAKGKDQALLMRQKMHLGLGVLDVQSHHGVNSVGSVSDGTNHAYNSVNNS
VSGSLRDNSVNSPLYMHHSMSPSLNFTKSPIPTIVGHTNNMSIAYTCNPP
FGLKATLDGGVMVANASPATPGGNASSGSSGANSSQSIVPGMGPVCGISV
ITSMGSNSGTLCEGPPTPTQELDLSGSALEQQQLAAAAAAATASSLQLQA
AQQAQQQRKLDGTSSATLSSLQSCVSSSGQAANLRGPEISPKLAKYFRAD
LIAHVTNWHAEVLERQAQKCCEDTHLFGDITCTRICAELKCARSLVRSTE
INATLQEQKIMYLRHQIRRIEESKTQNAFMSDDT*

LD32364.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:50:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG8949-PG 860 CG8949-PG 1..834 1..834 4423 100 Plus
CG8949-PD 834 CG8949-PD 1..834 1..834 4423 100 Plus
CG8949-PA 834 CG8949-PA 1..834 1..834 4423 100 Plus
CG8949-PE 838 CG8949-PE 1..838 1..834 4408 99.5 Plus
CG8949-PC 832 CG8949-PC 1..832 1..834 4401 99.8 Plus