BDGP Sequence Production Resources |
Search the DGRC for LD32410
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 324 |
Well: | 10 |
Vector: | pOT2 |
Associated Gene/Transcript | Saf6-RA |
Protein status: | LD32410.pep: gold |
Preliminary Size: | 3071 |
Sequenced Size: | 2438 |
Gene | Date | Evidence |
---|---|---|
CG3883 | 2001-01-01 | Release 2 assignment |
CG3883 | 2001-11-29 | Blastp of sequenced clone |
CG3883 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3883 | 2008-04-29 | Release 5.5 accounting |
CG3883 | 2008-08-15 | Release 5.9 accounting |
CG3883 | 2008-12-18 | 5.12 accounting |
2438 bp (2438 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069583
> LD32410.complete CAAGATTTGTTTATTTTGTGGTGCAGCTTCGTTGTTTATTTACCAACTGT TGAAAATATATACATTTATGAATTATACAAAACCAAGAAGATGAAAACCT CTGGCGCCAGCAATACTGACGAGCTGAACAAGTCATCGCACAGCAAAGTC AGCAAAAAGTCCACTAAGTCGCGATCTAAGTCGGCGAAATTGGAGTTGAC TGGAAAGAATTCCCTGTCGGCATCCGCATCATCCTCCATCGCATCCGCAG TGAGCGGGGGCGTTGCAGTGGGCAGCCTGCCGGCCACGCCCACTCACCTA AACATGGTGACAACGCCCACCACGCCAACATCTAGTCTGGGTAACTACAA TCTGTTTGACGCCTCATTTGCGGTAGCAGGAAGTGGTGGGCACGGACTTG CAGGCGGCATCGCGGGCGCAGAAGCCTCTGGCAACTCCAGTCGAATGGGT CATCAGAAGAGCTATGCTGGTTTCGATCCGCGCAGCATCAAGATCTTTTG GGAGCAGCACGACCAGACCGATGTGGAACTCTCCCAGGATGTGTGCGCCC GTTTGGCGGAAGATGCCTCCTACAAAGTCTGGGAGCTGATCAATAATGTC AAAATATACTCGCGCCACTCGGGCGGAGTGGTGACATACGACCTGGTGAA CGAAGTGCTAAAAGATGCCGATGTGCCGCCTATGCTGGGTGCGATGGACA GCGACTGGGACCGGATCGACTATGACGGCAGTTTTTACTTTCACTCGGAT AAGATCTTCGAGCTGAGCGCGGAGTTTCAGAAGGAAGTCAATCTGTGCAC ACCTGATGATGCAGACTTTCAGAGCATCTGCCCAGTGGAGGATAAGCACA TGGACCAACTAAGACAGTGTGTCCAGAGTCTTGTGACGGCAGCCCTTTTT GCGGACAGCAAATCCCAGACGGCCGCCGTCTGCCATGCTTTTCAGACACC CCTGATGGGATCTATCTACCGAGTGATTGTGAGTAAGATGGTCCAGTTGC TAGCCTTTAAGCAGCAGGACCATTTGAGCCAGCGATGCTGGCGACTGCTC CGAGCATGCAACTACAACGCCACTGCTAATCACAATGCCTGCCGGCCGGA GTACTTCAACCTGGCCGAGGTACTGGTCAGCCAGCTAATGGCACCTTACG AAACTATCAAAGCTCCACACGTCGACCCAGATCCGGGACAAACCACCTCC ATCAAAATGGAGTTTGAAGAAGAACTAAAGGTTGAGCCAGACCAGTGCCA TAATCCGGAAACCCAGGAAAATCCGGAGGTCATGGGAGTAGAGAAACAGG AGCAAGAACCCCAGATGTTTCCGGGTGAGAGCACCATGGAACACACAATC TACAAGCTGCAATCGGAGGAGGAGGAATTGAATCCTCAGCCGGAGGCGGA ACACCTATCCAGCTACTTTGCCTGTCCAGTCGGCAATGGCCTGGTGGACG AGCTGTGTGAAACTATAGGACAGCTGGCATCTCAAAGTGGTTACCTACAT GCAGAGTGCCTGTTTTTGATCAAGAGACGCCTAGCGAGATTCTTCGAAGG TCGCCACGTCAGCAGTGAGAGAGACTTTAGGTATATCAGTAGAGCAGTGC GCGGTCTCATTGCCCTGGGAGAATATGCCTTTCGTGAGTTTATTCCCTAC ATCTACAAACTGCGCGTCGAGGAAATCCCGGATAGCCTGTGGCCGGATCT GGCTCCGGCTGCCATCTTCCTTGGCGGTCATGATGACGTATACCTGTATG AATGGCTGGAGTACGGATGCGGTGCTGCTCTGCAGCCCTTCTTGGTCCAC TATGCGCGAGCCTACGAAAAGATGGTAACCAGACGGTATGTGAAGGCCAA ACAACCCGCTTACAGAATAGAATCAGTGCCGGGAGTGCGTCGGTTGGAAT GGAGTACTCTTGCGGCAGCCATGTGCCACGGAGACGATCCTAGCAAGGCA CTCAAACCGAAGCCTACGCTCTGCGAGGCTTTCCCCGACCTTCAGTCACC AAATCTTCAGCTCAACTGCGCGGGCAACATCCGCTTTAAGTTTGCAGGAT GCCGCCCGGTGCTGCTGAAGCCGAAGGTTGCGACTGTTCCCCACTCCGAA GACTCGCCTTCGTCGGCAGCGAACGGTGGTGGGGGTGGCGGTGCCAGCTC CGACATCCTGATCGCCAAACGAAAACTCTTTAAGCCCCTGACCAACGTGA GAAAGTGGTCGCCCATCAGTGGCTATCACTACCTAAGGATCTGAAAGGGA CTTGGGAAAGTATTATAAGACCTTCTGGAGGTCCAGGAGGACCTGGGGAT CTCAATAAAACTCTTCGTTTACTTTAGACTTCCTCTTCGGTCTTCCGAAA GGTGATACAACTTTACTCGTAATACATAAAAACACAGAAAAAAAAAAAAA AAATAAAACAAAGAAAAAACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3883-RA | 2492 | CG3883-RA | 44..2432 | 1..2389 | 11945 | 100 | Plus |
CG3883.a | 2470 | CG3883.a | 477..2410 | 456..2389 | 9670 | 100 | Plus |
CG3883.a | 2470 | CG3883.a | 31..477 | 1..447 | 2235 | 100 | Plus |
KH1-RA | 1887 | KH1-RA | 1747..1887 | 2389..2249 | 705 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 814119..815097 | 1573..595 | 4760 | 99.1 | Minus |
chr2L | 23010047 | chr2L | 813188..813769 | 2389..1808 | 2850 | 99.3 | Minus |
chr2L | 23010047 | chr2L | 815345..815792 | 448..1 | 2225 | 99.8 | Minus |
chr2L | 23010047 | chr2L | 813826..814062 | 1808..1572 | 1170 | 99.6 | Minus |
chr2L | 23010047 | chr2L | 815146..815293 | 594..447 | 740 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 814243..815221 | 1573..595 | 4895 | 100 | Minus |
2L | 23513712 | 2L | 813312..813893 | 2389..1808 | 2910 | 100 | Minus |
2L | 23513712 | 2L | 815474..815921 | 448..1 | 2240 | 100 | Minus |
2L | 23513712 | 2L | 813950..814186 | 1808..1572 | 1185 | 100 | Minus |
2L | 23513712 | 2L | 815275..815422 | 594..447 | 740 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 814243..815221 | 1573..595 | 4895 | 100 | Minus |
2L | 23513712 | 2L | 813312..813893 | 2389..1808 | 2910 | 100 | Minus |
2L | 23513712 | 2L | 815474..815921 | 448..1 | 2240 | 100 | Minus |
2L | 23513712 | 2L | 813950..814186 | 1808..1572 | 1185 | 100 | Minus |
2L | 23513712 | 2L | 815275..815422 | 594..447 | 740 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 815146..815292 | 448..594 | 100 | <- | Minus |
chr2L | 813190..813769 | 1808..2387 | 99 | <- | Minus |
chr2L | 813827..814060 | 1574..1807 | 99 | <- | Minus |
chr2L | 814119..815097 | 595..1573 | 99 | <- | Minus |
chr2L | 815346..815792 | 1..447 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3883-RA | 1..2154 | 91..2244 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Saf6-RA | 1..2154 | 91..2244 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Saf6-RA | 1..2154 | 91..2244 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3883-RA | 1..2154 | 91..2244 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Saf6-RA | 1..2154 | 91..2244 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3883-RA | 31..2417 | 1..2387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Saf6-RA | 31..2417 | 1..2387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Saf6-RA | 30..2416 | 1..2387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3883-RA | 31..2417 | 1..2387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Saf6-RA | 30..2416 | 1..2387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 813314..813893 | 1808..2387 | 100 | <- | Minus |
2L | 813951..814184 | 1574..1807 | 100 | <- | Minus |
2L | 814243..815221 | 595..1573 | 100 | <- | Minus |
2L | 815275..815421 | 448..594 | 100 | <- | Minus |
2L | 815475..815921 | 1..447 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 813314..813893 | 1808..2387 | 100 | <- | Minus |
2L | 813951..814184 | 1574..1807 | 100 | <- | Minus |
2L | 814243..815221 | 595..1573 | 100 | <- | Minus |
2L | 815275..815421 | 448..594 | 100 | <- | Minus |
2L | 815475..815921 | 1..447 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 813314..813893 | 1808..2387 | 100 | <- | Minus |
2L | 813951..814184 | 1574..1807 | 100 | <- | Minus |
2L | 814243..815221 | 595..1573 | 100 | <- | Minus |
2L | 815275..815421 | 448..594 | 100 | <- | Minus |
2L | 815475..815921 | 1..447 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 813314..813893 | 1808..2387 | 100 | <- | Minus |
arm_2L | 813951..814184 | 1574..1807 | 100 | <- | Minus |
arm_2L | 814243..815221 | 595..1573 | 100 | <- | Minus |
arm_2L | 815275..815421 | 448..594 | 100 | <- | Minus |
arm_2L | 815475..815921 | 1..447 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 813314..813893 | 1808..2387 | 100 | <- | Minus |
2L | 813951..814184 | 1574..1807 | 100 | <- | Minus |
2L | 814243..815221 | 595..1573 | 100 | <- | Minus |
2L | 815275..815421 | 448..594 | 100 | <- | Minus |
2L | 815475..815921 | 1..447 | 100 | Minus |
Translation from 0 to 2243
> LD32410.hyp QDLFILWCSFVVYLPTVENIYIYELYKTKKMKTSGASNTDELNKSSHSKV SKKSTKSRSKSAKLELTGKNSLSASASSSIASAVSGGVAVGSLPATPTHL NMVTTPTTPTSSLGNYNLFDASFAVAGSGGHGLAGGIAGAEASGNSSRMG HQKSYAGFDPRSIKIFWEQHDQTDVELSQDVCARLAEDASYKVWELINNV KIYSRHSGGVVTYDLVNEVLKDADVPPMLGAMDSDWDRIDYDGSFYFHSD KIFELSAEFQKEVNLCTPDDADFQSICPVEDKHMDQLRQCVQSLVTAALF ADSKSQTAAVCHAFQTPLMGSIYRVIVSKMVQLLAFKQQDHLSQRCWRLL RACNYNATANHNACRPEYFNLAEVLVSQLMAPYETIKAPHVDPDPGQTTS IKMEFEEELKVEPDQCHNPETQENPEVMGVEKQEQEPQMFPGESTMEHTI YKLQSEEEELNPQPEAEHLSSYFACPVGNGLVDELCETIGQLASQSGYLH AECLFLIKRRLARFFEGRHVSSERDFRYISRAVRGLIALGEYAFREFIPY IYKLRVEEIPDSLWPDLAPAAIFLGGHDDVYLYEWLEYGCGAALQPFLVH YARAYEKMVTRRYVKAKQPAYRIESVPGVRRLEWSTLAAAMCHGDDPSKA LKPKPTLCEAFPDLQSPNLQLNCAGNIRFKFAGCRPVLLKPKVATVPHSE DSPSSAANGGGGGGASSDILIAKRKLFKPLTNVRKWSPISGYHYLRI*
Translation from 90 to 2243
> LD32410.pep MKTSGASNTDELNKSSHSKVSKKSTKSRSKSAKLELTGKNSLSASASSSI ASAVSGGVAVGSLPATPTHLNMVTTPTTPTSSLGNYNLFDASFAVAGSGG HGLAGGIAGAEASGNSSRMGHQKSYAGFDPRSIKIFWEQHDQTDVELSQD VCARLAEDASYKVWELINNVKIYSRHSGGVVTYDLVNEVLKDADVPPMLG AMDSDWDRIDYDGSFYFHSDKIFELSAEFQKEVNLCTPDDADFQSICPVE DKHMDQLRQCVQSLVTAALFADSKSQTAAVCHAFQTPLMGSIYRVIVSKM VQLLAFKQQDHLSQRCWRLLRACNYNATANHNACRPEYFNLAEVLVSQLM APYETIKAPHVDPDPGQTTSIKMEFEEELKVEPDQCHNPETQENPEVMGV EKQEQEPQMFPGESTMEHTIYKLQSEEEELNPQPEAEHLSSYFACPVGNG LVDELCETIGQLASQSGYLHAECLFLIKRRLARFFEGRHVSSERDFRYIS RAVRGLIALGEYAFREFIPYIYKLRVEEIPDSLWPDLAPAAIFLGGHDDV YLYEWLEYGCGAALQPFLVHYARAYEKMVTRRYVKAKQPAYRIESVPGVR RLEWSTLAAAMCHGDDPSKALKPKPTLCEAFPDLQSPNLQLNCAGNIRFK FAGCRPVLLKPKVATVPHSEDSPSSAANGGGGGGASSDILIAKRKLFKPL TNVRKWSPISGYHYLRI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14825-PA | 708 | GF14825-PA | 45..708 | 54..717 | 2616 | 74.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24629-PA | 717 | GG24629-PA | 1..717 | 1..717 | 3291 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10497-PA | 702 | GH10497-PA | 1..702 | 1..717 | 2354 | 65.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Saf6-PA | 717 | CG3883-PA | 1..717 | 1..717 | 3771 | 100 | Plus |
Saf6-PB | 714 | CG3883-PB | 1..714 | 1..717 | 3738 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18014-PA | 718 | GI18014-PA | 1..718 | 1..717 | 2507 | 66.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18634-PA | 704 | GL18634-PA | 29..704 | 37..717 | 2493 | 73 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17749-PA | 712 | GA17749-PA | 1..712 | 1..717 | 2556 | 73.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16645-PA | 717 | GM16645-PA | 1..717 | 1..717 | 3763 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22941-PA | 717 | GD22941-PA | 1..717 | 1..717 | 3793 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19648-PA | 733 | GJ19648-PA | 1..733 | 1..717 | 2409 | 66.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24415-PA | 703 | GK24415-PA | 1..703 | 1..717 | 2127 | 58.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15931-PA | 717 | GE15931-PA | 1..717 | 1..717 | 3354 | 95.7 | Plus |