BDGP Sequence Production Resources |
Search the DGRC for LD32469
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 324 |
Well: | 69 |
Vector: | pOT2 |
Associated Gene/Transcript | SC35-RB |
Protein status: | LD32469.pep: gold |
Preliminary Size: | 1184 |
Sequenced Size: | 1055 |
Gene | Date | Evidence |
---|---|---|
CG5442 | 2001-01-01 | Release 2 assignment |
CG5442 | 2001-11-29 | Blastp of sequenced clone |
CG5442 | 2003-01-01 | Sim4 clustering to Release 3 |
SC35 | 2008-04-29 | Release 5.5 accounting |
SC35 | 2008-08-15 | Release 5.9 accounting |
SC35 | 2008-12-18 | 5.12 accounting |
1055 bp (1055 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069584
> LD32469.complete AGTTTGGCTCGTTTTCAGCATTCGCATTAGCATTTTAGCGGTAAAACAAA TATCCAAATAGACAATGAGCAACGGTGGTGGTGCCGGGGGATTGGGCGCA GCGCGTCCACCTCCACGGATCGATGGAATGGTCTCGCTTAAGGTCGACAA TCTCACATATCGCACCACGCCGGAGGATCTGCGTCGGGTCTTCGAGCGGT GCGGCGAGGTGGGGGACATCTACATACCCAGGGATCGCTACACACGTGAG AGCCGCGGATTCGCATTTGTTCGCTTCTATGACAAACGTGATGCCGAGGA CGCACTGGAGGCCATGGATGGTCGCATGCTAGACGGCAGGGAGCTCCGCG TACAGATGGCCCGCTACGGACGCCCCTCTTCGCCCACTCGCAGCTCCAGT GGTCGTCGTGGCGGAGGAGGAGGCGGTGGTTCCGGCGGGCGTCGTCGGTC ACGTTCTCGCTCCCCAATGCGCCGTCGTTCGCGCAGTCCGCGTCGCCGAT CATACTCCCGTTCCCGCTCGCCTGGTAGCCACTCGCCGGAACGCCGATCC AAATTTTCACGCAGTCCAGTACGCGGCGACAGCCGCAATGGAATCGGAAG CGGATCTGGAGGACTGGCCCCAGCCGCGTCTCGTAGTCGCAGTCGCTCCT AGATATCGACGTCACGTTCCATTTAGTGGGAGTGCGAGATATGACTCGCT GACTAGGGCCAATGCTGTATCCTGTTCCGGATCTATGGCTCCATCTGTGT CATGCTGTACCCGAACAGCAGGTATAGAAACCATTATACAATCTTACACT TAACACAACTATTTATAGCGAACTATTTTAAGTTTCGGCAGAGTAAATAA GTAGAGATCAGGCATGATTATGTTCCGAGTGAGATCCCCGCAACCTGGGC GATCCCTCGATGTCGGTTCTTGCACATAGGCTTTCATATACTAGAGCGTA GTAGAAATCCTTGAACGTAATCAGAAACAGAACAAAATAAACTCAAATTA ACACGGCTTCAATTCAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 12430926..12431349 | 688..265 | 2090 | 99.5 | Minus |
chr2L | 23010047 | chr2L | 12430493..12430823 | 1017..687 | 1655 | 100 | Minus |
chr2L | 23010047 | chr2L | 12432451..12432593 | 143..1 | 715 | 100 | Minus |
chr2L | 23010047 | chr2L | 12432196..12432328 | 273..141 | 665 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 12432309..12432732 | 688..265 | 2090 | 99.5 | Minus |
2L | 23513712 | 2L | 12431876..12432206 | 1017..687 | 1655 | 100 | Minus |
2L | 23513712 | 2L | 12433834..12433976 | 143..1 | 715 | 100 | Minus |
2L | 23513712 | 2L | 12433579..12433711 | 273..141 | 665 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 12432309..12432732 | 688..265 | 2090 | 99.5 | Minus |
2L | 23513712 | 2L | 12431876..12432206 | 1017..687 | 1655 | 100 | Minus |
2L | 23513712 | 2L | 12433834..12433976 | 143..1 | 715 | 100 | Minus |
2L | 23513712 | 2L | 12433579..12433711 | 273..141 | 665 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
McClintock | 6450 | McClintock McCLINTOCK 6450bp | 2659..2711 | 973..1025 | 112 | 67.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 12432452..12432593 | 1..142 | 100 | Minus | |
chr2L | 12430495..12430821 | 689..1015 | 100 | <- | Minus |
chr2L | 12430926..12431340 | 274..688 | 100 | <- | Minus |
chr2L | 12432196..12432326 | 143..273 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SC35-RB | 1..588 | 65..652 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SC35-RC | 1..588 | 65..652 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SC35-RB | 1..588 | 65..652 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SC35-RB | 1..588 | 65..652 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SC35-RB | 1..588 | 65..652 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SC35-RB | 70..1084 | 1..1015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SC35-RB | 70..1084 | 1..1015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SC35-RD | 63..1077 | 1..1015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SC35-RB | 70..1084 | 1..1015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SC35-RD | 63..1077 | 1..1015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12431878..12432204 | 689..1015 | 100 | <- | Minus |
2L | 12432309..12432723 | 274..688 | 100 | <- | Minus |
2L | 12433579..12433709 | 143..273 | 100 | <- | Minus |
2L | 12433835..12433976 | 1..142 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12431878..12432204 | 689..1015 | 100 | <- | Minus |
2L | 12432309..12432723 | 274..688 | 100 | <- | Minus |
2L | 12433579..12433709 | 143..273 | 100 | <- | Minus |
2L | 12433835..12433976 | 1..142 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12431878..12432204 | 689..1015 | 100 | <- | Minus |
2L | 12432309..12432723 | 274..688 | 100 | <- | Minus |
2L | 12433579..12433709 | 143..273 | 100 | <- | Minus |
2L | 12433835..12433976 | 1..142 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 12431878..12432204 | 689..1015 | 100 | <- | Minus |
arm_2L | 12432309..12432723 | 274..688 | 100 | <- | Minus |
arm_2L | 12433579..12433709 | 143..273 | 100 | <- | Minus |
arm_2L | 12433835..12433976 | 1..142 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12431878..12432204 | 689..1015 | 100 | <- | Minus |
2L | 12432309..12432723 | 274..688 | 100 | <- | Minus |
2L | 12433579..12433709 | 143..273 | 100 | <- | Minus |
2L | 12433835..12433976 | 1..142 | 100 | Minus |
Translation from 64 to 651
> LD32469.pep MSNGGGAGGLGAARPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVG DIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQMAR YGRPSSPTRSSSGRRGGGGGGGSGGRRRSRSRSPMRRRSRSPRRRSYSRS RSPGSHSPERRSKFSRSPVRGDSRNGIGSGSGGLAPAASRSRSRS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15672-PA | 199 | GF15672-PA | 1..105 | 1..108 | 527 | 96.3 | Plus |
Dana\GF16759-PA | 154 | GF16759-PA | 31..105 | 24..98 | 148 | 38.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10262-PA | 195 | GG10262-PA | 1..195 | 1..195 | 927 | 99.5 | Plus |
Dere\GG22670-PA | 154 | GG22670-PA | 28..103 | 21..96 | 151 | 39.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11678-PA | 203 | GH11678-PA | 1..104 | 1..104 | 495 | 95.2 | Plus |
Dgri\GH15101-PA | 154 | GH15101-PA | 31..105 | 24..98 | 148 | 38.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SC35-PD | 195 | CG5442-PD | 1..195 | 1..195 | 1009 | 100 | Plus |
SC35-PC | 195 | CG5442-PC | 1..195 | 1..195 | 1009 | 100 | Plus |
SC35-PB | 195 | CG5442-PB | 1..195 | 1..195 | 1009 | 100 | Plus |
SC35-PA | 112 | CG5442-PA | 1..112 | 84..195 | 571 | 100 | Plus |
Rbp1-PA | 135 | CG17136-PA | 15..134 | 27..160 | 222 | 42.5 | Plus |
RnpS1-PA | 374 | CG16788-PA | 214..372 | 15..157 | 199 | 37.7 | Plus |
Rbp1-like-PC | 158 | CG1987-PC | 15..157 | 27..160 | 195 | 36.2 | Plus |
Rbp1-like-PA | 158 | CG1987-PA | 15..157 | 27..160 | 195 | 36.2 | Plus |
B52-PN | 350 | CG10851-PN | 93..278 | 5..195 | 195 | 37.4 | Plus |
B52-PC | 350 | CG10851-PC | 93..278 | 5..195 | 195 | 37.4 | Plus |
B52-PA | 350 | CG10851-PA | 93..278 | 5..195 | 195 | 37.4 | Plus |
B52-PB | 329 | CG10851-PB | 93..283 | 4..195 | 191 | 36.5 | Plus |
B52-PO | 355 | CG10851-PO | 93..283 | 4..195 | 191 | 36.5 | Plus |
B52-PM | 355 | CG10851-PM | 93..283 | 4..195 | 191 | 36.5 | Plus |
x16-PB | 257 | CG10203-PB | 12..184 | 27..195 | 180 | 33.5 | Plus |
Rsf1-PB | 200 | CG5655-PB | 14..193 | 27..195 | 174 | 34 | Plus |
Rsf1-PA | 200 | CG5655-PA | 14..193 | 27..195 | 174 | 34 | Plus |
x16-PA | 258 | CG10203-PA | 12..185 | 27..195 | 174 | 33.9 | Plus |
Rox8-PC | 464 | CG5422-PC | 86..196 | 14..124 | 173 | 35.1 | Plus |
Rox8-PB | 464 | CG5422-PB | 86..196 | 14..124 | 173 | 35.1 | Plus |
Rox8-PH | 470 | CG5422-PH | 86..196 | 14..124 | 173 | 35.1 | Plus |
Rox8-PG | 470 | CG5422-PG | 86..196 | 14..124 | 173 | 35.1 | Plus |
Rox8-PE | 470 | CG5422-PE | 86..196 | 14..124 | 173 | 35.1 | Plus |
Rox8-PD | 470 | CG5422-PD | 86..196 | 14..124 | 173 | 35.1 | Plus |
Rbp1-like-PB | 247 | CG1987-PB | 15..101 | 27..125 | 167 | 39.4 | Plus |
snRNP-U1-70K-PC | 448 | CG8749-PC | 99..261 | 20..194 | 163 | 28.4 | Plus |
snRNP-U1-70K-PA | 448 | CG8749-PA | 99..261 | 20..194 | 163 | 28.4 | Plus |
SF2-PB | 255 | CG6987-PB | 11..116 | 27..136 | 156 | 38.2 | Plus |
SF2-PA | 255 | CG6987-PA | 11..116 | 27..136 | 156 | 38.2 | Plus |
CG34334-PA | 708 | CG34334-PA | 535..696 | 23..176 | 155 | 32.5 | Plus |
Rbp1-PD | 144 | CG17136-PD | 15..115 | 27..139 | 148 | 35.4 | Plus |
atms-PB | 538 | CG2503-PB | 395..526 | 74..195 | 147 | 35.6 | Plus |
atms-PA | 538 | CG2503-PA | 395..526 | 74..195 | 147 | 35.6 | Plus |
caz-PD | 355 | CG3606-PD | 57..186 | 4..127 | 146 | 31.1 | Plus |
caz-PC | 384 | CG3606-PC | 86..215 | 4..127 | 146 | 31.1 | Plus |
caz-PB | 399 | CG3606-PB | 101..230 | 4..127 | 146 | 31.1 | Plus |
Cbp20-PA | 154 | CG12357-PA | 31..103 | 24..96 | 144 | 39.7 | Plus |
tra2-PE | 179 | CG10128-PE | 16..170 | 27..153 | 141 | 32.9 | Plus |
B52-PI | 135 | CG10851-PI | 8..116 | 27..140 | 138 | 35.6 | Plus |
B52-PD | 135 | CG10851-PD | 8..116 | 27..140 | 138 | 35.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17122-PA | 203 | GI17122-PA | 14..105 | 13..104 | 482 | 100 | Plus |
Dmoj\GI23717-PA | 154 | GI23717-PA | 31..105 | 24..98 | 149 | 38.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18771-PA | 72 | GL18771-PA | 1..68 | 1..68 | 294 | 92.6 | Plus |
Dper\GL12592-PA | 154 | GL12592-PA | 30..105 | 23..98 | 148 | 38.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18884-PA | 207 | GA18884-PA | 1..108 | 1..108 | 515 | 97.2 | Plus |
Dpse\GA11577-PA | 154 | GA11577-PA | 30..105 | 23..98 | 148 | 38.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26218-PA | 195 | GM26218-PA | 1..195 | 1..195 | 930 | 99.5 | Plus |
Dsec\GM15280-PA | 154 | GM15280-PA | 30..105 | 23..98 | 146 | 38.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22120-PA | 195 | GD22120-PA | 1..195 | 1..195 | 930 | 99.5 | Plus |
Dsim\GD19204-PA | 154 | GD19204-PA | 30..105 | 23..98 | 146 | 38.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16161-PA | 202 | GJ16161-PA | 15..105 | 14..104 | 481 | 100 | Plus |
Dvir\GJ23276-PA | 154 | GJ23276-PA | 31..105 | 24..98 | 148 | 38.7 | Plus |
Dvir\GJ18756-PA | 154 | GJ18756-PA | 31..103 | 24..96 | 142 | 38.4 | Plus |
Translation from 64 to 651
> LD32469.hyp MSNGGGAGGLGAARPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVG DIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQMAR YGRPSSPTRSSSGRRGGGGGGGSGGRRRSRSRSPMRRRSRSPRRRSYSRS RSPGSHSPERRSKFSRSPVRGDSRNGIGSGSGGLAPAASRSRSRS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SC35-PD | 195 | CG5442-PD | 1..195 | 1..195 | 1009 | 100 | Plus |
SC35-PC | 195 | CG5442-PC | 1..195 | 1..195 | 1009 | 100 | Plus |
SC35-PB | 195 | CG5442-PB | 1..195 | 1..195 | 1009 | 100 | Plus |
SC35-PA | 112 | CG5442-PA | 1..112 | 84..195 | 571 | 100 | Plus |
Rbp1-PA | 135 | CG17136-PA | 15..134 | 27..160 | 222 | 42.5 | Plus |