BDGP Sequence Production Resources |
Search the DGRC for LD32631
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 326 |
Well: | 31 |
Vector: | pOT2 |
Associated Gene/Transcript | tef-RA |
Protein status: | LD32631.pep: gold |
Preliminary Size: | 2176 |
Sequenced Size: | 2161 |
Gene | Date | Evidence |
---|---|---|
CG8961 | 2001-01-01 | Release 2 assignment |
CG8961 | 2001-07-04 | Blastp of sequenced clone |
CG8961 | 2003-01-01 | Sim4 clustering to Release 3 |
tef | 2008-04-29 | Release 5.5 accounting |
tef | 2008-08-15 | Release 5.9 accounting |
tef | 2008-12-18 | 5.12 accounting |
2161 bp (2161 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051818
> LD32631.complete CTTTCAGCCCTCTTTTTAAGACGACGCGCGATTGTAATTTGTTAATATTA TTAAGTCTTTAGTCCTGTGATTTTTATAATGTCTAAGTTTCTGGACATGC TATCGGGGAGCCAGTGCGTCAGCCTGGAAAAGTGCGGCGATGTGGTGGTC TCAACCAACGACTGTATGATTGCACTTTACTGCCACTTCTGCCGTGACCT CTTCACACAACTGCCGGAGTTCTTAAGACACCTCCAAAGCAACCATTCGG ATGTGCTGCACTTCACCAAGGAGCACAACGTTTACAGCGTGGAGGAGCTG TTGTCCGGTGAGCAGGGTAAAGCCCACGAGGACGCCCAGTCGGCGGGGCA CAACAGCAGCAGCGGTGACTCTAGTTCACTGATGAATTCAGAGGATTCTA GGGCCATCGAAGGCTCAGAAGATAACTCAGACAATAGCCCAATGAAACCT GAACAAATAGGGAAACAGAGTGAAATAAACCTGCTAGCGGAAGTGACAAA CATTTTATTGCAAACCAACGACAAGGAATTAAAACCCGAAAATGGCGTAT TCAACAGACCACGCAAAAAGGCTAATAACGAGAGCAGTTCTTTGAAGATA TGCGATCTGAAGAGTCACACTATTGCAAGGACTTCGCGAAAGCGAATGAG CATGGTAAAGAACCGCATCCTGCGAGTCCTTGACAGCGATTTGTCTGCAA AGCTTGAAATTAAACCTCCAGAGCCCAACTCCAAACTTTCTATAACTGAG CCCATCCAAGAAGACAACATACCTGGAACATGTTTTGACACTCCTACAAA GCCCATACCGAGCTCATCTCAATTAAGTGTAAGAAAGTCTTCTTTAACAG AGGCAAACCAAATATGTACCAAATATGCCGAGAAGAAAACGGCGCCTACC ATGCCTAAGCTACTGAACTGTGTACCAAAGCCCATATTAACTAGTCAACA AGCTCATACTAATGCCGAGATAAGTGAGATAAATGAAACCTATCACCTAG CAGCTAGTCAAGTGACAAAAACCACGAAAACATTTCCCGTAAAAATAACA CAAATAGATATTTTACAACCAGTTAAGTTACCTAAAACTTTAATAACACC AATCAATGAAGAGGGTGTCAGTGACCAAGTGGAGAATAGCACGAATAATA TAAACAATGCCCAAAGTCTGCCGAAAGAAAACACAAAAAAGTTTTTTAAA AAGCGTAGCGAATTAGGGATAAAAGCTCAAGGCAGTCCCAACAAATTTTT TAAAATAATAAAGTCCAAGGCAAACCCCATTATTGTAAAACGGGTGCAGA CCACCAGTGCCAAAGCTAGTACAAACAAAATCCAAATACGATCTAATGAC AAAACTAATTGTTTTGCTTCTGAGTTTAACAGCACAAAGATCCGCAAGTT AAAGATGGAAAATTGCGTCGACCTAAAATCGGAAGATCCCTGCGCCAATA CAAATACGCGTTTAAACAAATTGGCAACAATAAGCAGTTGCGAAATATTA AAAGCGGTTGGATTGCCGGCAATCACAGATAACCCGATCGAGGATACATT ATTGCCAGACGAGTTAGAAACGATCCGAAAAAAGGCAGATCAATTCATCA AAATCTACAGGAAGTACGATTCTATTTGGAATTATAGAAAAATTTGTCCG CCAGCGAAACCGGACTTTATTTCTCAACAGATATTTGCTTTAACCAGAGA AGTTAACAAGACAATGTTATGCAACCTGGCGAACAGCGATATAAAAGGCA TTATTAATCAGATTTCAGTTTGGCATTACAATATATATACCCAATATATT GACTTGGATACCATTTCGGAAAATGCCCGATATACTTTAAAGCTATTCTC GTTTTTACCTGTTAGTTTTGCTTACTTTTGCAAATGTTGCGACGATATTT TCATCTTAAAGAAAGAGTACTTAAAGCATTTGATTTCTCACCAAGTTCGG TTTCAGTGCACAAAATGCATTAAAGTATTCAAGTACAAGGGATACTATGA AAAGCATTTGCGAAACGCTCATTCTTAAGCCACAATGTGTCATTTAGTCA TGGTTACATATATTTTTTCTAACCCTACATAAAGTTATGTATTTATTAAA TAAAAAGGAATTCCGAAAAGCTAATGCTAACCAATTTGTCAATAAAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
tef-RA | 2210 | tef-RA | 48..2193 | 1..2146 | 10730 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 12942435..12943498 | 1512..449 | 5305 | 99.9 | Minus |
chr2R | 21145070 | chr2R | 12941746..12942376 | 2143..1513 | 3140 | 99.8 | Minus |
chr2R | 21145070 | chr2R | 12943563..12944010 | 448..1 | 2240 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 17055235..17056298 | 1512..449 | 5320 | 100 | Minus |
2R | 25286936 | 2R | 17054543..17055176 | 2146..1513 | 3170 | 100 | Minus |
2R | 25286936 | 2R | 17056363..17056810 | 448..1 | 2240 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 17056434..17057497 | 1512..449 | 5320 | 100 | Minus |
2R | 25260384 | 2R | 17055742..17056375 | 2146..1513 | 3170 | 100 | Minus |
2R | 25260384 | 2R | 17057562..17058009 | 448..1 | 2240 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
GATE | 8507 | GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). | 711..752 | 1653..1694 | 138 | 81 | Plus |
copia | 5143 | copia DMCOPIA 5143bp Derived from X02599 (g7740) (Rel. 49, Last updated, Version 4). | 540..654 | 1543..1659 | 120 | 58.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 12941746..12942376 | 1513..2143 | 99 | <- | Minus |
chr2R | 12942435..12943498 | 449..1512 | 99 | <- | Minus |
chr2R | 12943563..12944010 | 1..448 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tef-RA | 1..1950 | 79..2028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tef-RA | 1..1950 | 79..2028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tef-RA | 1..1950 | 79..2028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tef-RA | 1..1950 | 79..2028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tef-RA | 1..1950 | 79..2028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tef-RA | 15..2157 | 1..2143 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tef-RA | 15..2157 | 1..2143 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tef-RA | 26..2168 | 1..2143 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tef-RA | 15..2157 | 1..2143 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tef-RA | 26..2168 | 1..2143 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17054546..17055176 | 1513..2143 | 100 | <- | Minus |
2R | 17055235..17056298 | 449..1512 | 100 | <- | Minus |
2R | 17056363..17056810 | 1..448 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17054546..17055176 | 1513..2143 | 100 | <- | Minus |
2R | 17055235..17056298 | 449..1512 | 100 | <- | Minus |
2R | 17056363..17056810 | 1..448 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17054546..17055176 | 1513..2143 | 100 | <- | Minus |
2R | 17055235..17056298 | 449..1512 | 100 | <- | Minus |
2R | 17056363..17056810 | 1..448 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 12942051..12942681 | 1513..2143 | 100 | <- | Minus |
arm_2R | 12942740..12943803 | 449..1512 | 100 | <- | Minus |
arm_2R | 12943868..12944315 | 1..448 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17055745..17056375 | 1513..2143 | 100 | <- | Minus |
2R | 17056434..17057497 | 449..1512 | 100 | <- | Minus |
2R | 17057562..17058009 | 1..448 | 100 | Minus |
Translation from 78 to 2027
> LD32631.pep MSKFLDMLSGSQCVSLEKCGDVVVSTNDCMIALYCHFCRDLFTQLPEFLR HLQSNHSDVLHFTKEHNVYSVEELLSGEQGKAHEDAQSAGHNSSSGDSSS LMNSEDSRAIEGSEDNSDNSPMKPEQIGKQSEINLLAEVTNILLQTNDKE LKPENGVFNRPRKKANNESSSLKICDLKSHTIARTSRKRMSMVKNRILRV LDSDLSAKLEIKPPEPNSKLSITEPIQEDNIPGTCFDTPTKPIPSSSQLS VRKSSLTEANQICTKYAEKKTAPTMPKLLNCVPKPILTSQQAHTNAEISE INETYHLAASQVTKTTKTFPVKITQIDILQPVKLPKTLITPINEEGVSDQ VENSTNNINNAQSLPKENTKKFFKKRSELGIKAQGSPNKFFKIIKSKANP IIVKRVQTTSAKASTNKIQIRSNDKTNCFASEFNSTKIRKLKMENCVDLK SEDPCANTNTRLNKLATISSCEILKAVGLPAITDNPIEDTLLPDELETIR KKADQFIKIYRKYDSIWNYRKICPPAKPDFISQQIFALTREVNKTMLCNL ANSDIKGIINQISVWHYNIYTQYIDLDTISENARYTLKLFSFLPVSFAYF CKCCDDIFILKKEYLKHLISHQVRFQCTKCIKVFKYKGYYEKHLRNAHS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13428-PA | 384 | GF13428-PA | 1..233 | 1..248 | 409 | 39.9 | Plus |
Dana\GF13428-PA | 384 | GF13428-PA | 211..383 | 451..622 | 246 | 32.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22222-PA | 658 | GG22222-PA | 1..657 | 1..648 | 2345 | 72.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22944-PA | 667 | GH22944-PA | 486..664 | 473..649 | 246 | 32.1 | Plus |
Dgri\GH22944-PA | 667 | GH22944-PA | 1..84 | 1..87 | 225 | 52.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
tef-PA | 649 | CG8961-PA | 1..649 | 1..649 | 3365 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18435-PA | 391 | GI18435-PA | 1..228 | 1..224 | 283 | 35.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10555-PA | 920 | GL10555-PA | 1..283 | 1..206 | 360 | 36 | Plus |
Dper\GL10555-PA | 920 | GL10555-PA | 737..917 | 473..648 | 327 | 38.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21437-PA | 485 | GA21437-PA | 1..267 | 1..197 | 331 | 36.2 | Plus |
Dpse\GA21437-PA | 485 | GA21437-PA | 302..482 | 473..648 | 322 | 39.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20010-PA | 656 | GM20010-PA | 1..655 | 1..648 | 3036 | 89 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25499-PA | 658 | GD25499-PA | 1..657 | 1..648 | 2974 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21520-PA | 576 | GJ21520-PA | 1..93 | 1..96 | 275 | 55.2 | Plus |
Dvir\GJ21520-PA | 576 | GJ21520-PA | 452..573 | 531..649 | 185 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14219-PA | 648 | GE14219-PA | 1..647 | 1..648 | 2417 | 72.8 | Plus |
Translation from 78 to 2027
> LD32631.hyp MSKFLDMLSGSQCVSLEKCGDVVVSTNDCMIALYCHFCRDLFTQLPEFLR HLQSNHSDVLHFTKEHNVYSVEELLSGEQGKAHEDAQSAGHNSSSGDSSS LMNSEDSRAIEGSEDNSDNSPMKPEQIGKQSEINLLAEVTNILLQTNDKE LKPENGVFNRPRKKANNESSSLKICDLKSHTIARTSRKRMSMVKNRILRV LDSDLSAKLEIKPPEPNSKLSITEPIQEDNIPGTCFDTPTKPIPSSSQLS VRKSSLTEANQICTKYAEKKTAPTMPKLLNCVPKPILTSQQAHTNAEISE INETYHLAASQVTKTTKTFPVKITQIDILQPVKLPKTLITPINEEGVSDQ VENSTNNINNAQSLPKENTKKFFKKRSELGIKAQGSPNKFFKIIKSKANP IIVKRVQTTSAKASTNKIQIRSNDKTNCFASEFNSTKIRKLKMENCVDLK SEDPCANTNTRLNKLATISSCEILKAVGLPAITDNPIEDTLLPDELETIR KKADQFIKIYRKYDSIWNYRKICPPAKPDFISQQIFALTREVNKTMLCNL ANSDIKGIINQISVWHYNIYTQYIDLDTISENARYTLKLFSFLPVSFAYF CKCCDDIFILKKEYLKHLISHQVRFQCTKCIKVFKYKGYYEKHLRNAHS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
tef-PA | 649 | CG8961-PA | 1..649 | 1..649 | 3365 | 100 | Plus |