BDGP Sequence Production Resources |
Search the DGRC for LD32923
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 329 |
Well: | 23 |
Vector: | pOT2 |
Associated Gene/Transcript | CG42240-RA |
Protein status: | LD32923.pep: gold |
Preliminary Size: | 2059 |
Sequenced Size: | 1911 |
Gene | Date | Evidence |
---|---|---|
CG15893 | 2001-01-01 | Release 2 assignment |
CG15893 | 2001-12-12 | Blastp of sequenced clone |
CG15893 | 2003-01-01 | Sim4 clustering to Release 3 |
CG42240 | 2008-08-15 | Release 5.9 accounting |
CG42240 | 2008-12-18 | 5.12 accounting |
1911 bp (1911 high quality bases) assembled on 2001-12-12
GenBank Submission: AY070559.1
> LD32923.complete AGCCATCGAACGGCGAAGGTGCGCGCATTAAAACTCTCCCCCGCAAAAAC CAAACAGAAAAAAGTGAAGAACGAAAACCGAAAAGAAAACGAAAAGACAG GAAAATCCAAGCAAAACGAGCCGAAAGACCGTTTTATTTCTTTTTGTTTT GTGTTCTGAAAGAGAGAGGGAAAAAGGCAAGCAGCAGAAAGTGATCGAGA TGGCGTTCATGATGCCCGTGATGAAGAACAATTACGATATTTACAAGGAC ACGCGTTCCCGCAAAACGTCAGAATGTTCGAATGCGAGTAGTAACGGTAC AACGGCTTTGGCCACCGCTCTTGGAACGCCCGCCCAGGGACAACAACAAC AGCGACGCCGCAAGGTGTCCGAATGCAAGTCGGAGAGCTTCGCCACCTCA CCATCGCACGGTCAACTGGGCGTGTCCTCCCCCCACCAAAGGATGCAAAT GCAGCGCTGCCACAGTTCGCGCGCTTTTCCACGCAACGCATCGCGCAGTT CGCACGGTTCGCTGCAGCAAATGGTGTCGCCCACGCGCAGTAGTCCGCCC AGCCGCTCGCACACCGCATCCGCACTGGAAAGGCAGGCGGCCGCCCAGGC AGCCGCGATTAATCAAAAGCAACAACAGTCGGCCGCTGCAGCTGCTGCTG TTGAATCTTCAAATGATTATACGAAGTTTCATTTGCGTTTGGTCGACAAG CTGCGCAAGTCCTTTCGCAAGGATAGCGGTAAGCGGTCATGAGAGCAGCG CAATCACAGCAACAACAACCAAATCTACGACAACAACAATGCCAGCAGCA GCAGCACGGCGCTCCTTTCCATTTCCCACAACAATAACAACGACAACAAC GGAGCCGGGTGGAAAGTTAGTGACGGTGCCGATGCCATTTCCAGAGGAAG ATCGCCTGGAAGAGATGTGGAGGAGTGCAGTTCTGCAACGTTCGAGGCAC TGGAAGCGTGTTCGAGAGCAGCCGAAGCGACAACACACAGAGAACGAGAG AGAGGCATGGTCAGTCGTTTGGGGATACGCTTCCGGCGATACTGTAGATT CCTGGCCCACTCCCCCCATGGAAGCGCTGCGGCGCCAGAAGACGAGACAG AGGCGGAGGCTAGCTCCTTGGAGCAGCTGACCGGCAGCAGGAGCAGCAGT CGCAGTCGCCGACGGCGCAGCAGCAGCATTGGGAGCGCCGGCAGCCGGCT GAAGATGCGACTGCGGCGCTGCACTTCGTCGCCAGGATAAGAGCGAGATG ACACTGATGATGGTCGGAGCGACAGAGAACGAGAGAGAGAGGACAGACTG GAAGTGAAGTGCAGAAGAAGAGAAAGAGAGTGCAGTGGCGTAGCCAAAAG GGAAAGGGGGTCGGGTCACAACAAAGAGTCACTTAACCTAGTTATTATTT GCCCCCCGGGAAAAAGGAAAGTGAGTTGGCGTACAGAGTTGTTGGTGCAA ATTAGATTGGGCATAATCTACATAATCTATACCTAAATCAATTTCGGTGT ACATATGCAAACTACTAAATATCTACATATATATACAAGTTAAAGTCCCA AATGTATAATTACATTAATTATATGTATTTATGTATGCCAGGCTTCCAAA TAGAATAGAGAGCATAGAACCTATCCCAAAACCCAAACCAAAACCTCTCC CAAATAATTCAAACTTTTTTTGTACCTGCGGTTTCGCGACAAGAGGAAAA CAGAGAATTGCAACTGCCAATTGCATTGTATAACAAAGACCACATCAGCA ACAACCCACAACAAGACAAAACACTTAAGAAAATAAACAGCAACCAGAAG AAAAGAACCACGGATTTTTACCCTTCATTTTATAATTGCATAATTACGAA GAGCAATTGACAATATACTTTTGAAAGCATTGCGAACAACAACAAAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG42240-RA | 1893 | CG42240-RA | 1..1893 | 1..1893 | 9465 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 6223036..6224928 | 1..1893 | 9420 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 6330858..6332767 | 1..1910 | 9520 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 6338956..6340865 | 1..1910 | 9520 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2411 | 750..852 | 188 | 67.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1518..1567 | 757..806 | 151 | 78 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2463..2627 | 757..914 | 149 | 58.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2359..2469 | 744..850 | 148 | 63.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6751..6816 | 742..806 | 147 | 71.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2327..2427 | 750..850 | 145 | 60.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6730..6842 | 742..850 | 139 | 62.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2399..2464 | 742..806 | 138 | 69.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2596..2644 | 758..806 | 137 | 75.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1070..1146 | 731..806 | 130 | 64.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6772..6883 | 742..852 | 125 | 58 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6725..6774 | 757..806 | 124 | 72 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2387..2480 | 756..852 | 117 | 62.2 | Plus |
X-element | 4740 | X-element ROXELEMENT 4740bp | 1743..1795 | 607..660 | 114 | 70.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1542..1587 | 757..802 | 113 | 71.7 | Plus |
rover | 7318 | rover ROVER 7318bp | 1257..1293 | 764..800 | 113 | 78.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 6223036..6223785 | 1..750 | 99 | == | Plus |
chrX | 6223842..6224156 | 807..1121 | 100 | == | Plus |
chrX | 6224231..6224928 | 1196..1893 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42240-RA | 1..543 | 200..742 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42240-RA | 1..543 | 200..742 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42240-RB | 1..1041 | 200..1240 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42240-RA | 1..543 | 200..742 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42240-RB | 1..1041 | 200..1240 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42240-RA | 1..1893 | 1..1893 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42240-RA | 1..1893 | 1..1893 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42240-RB | 17..1909 | 1..1893 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42240-RA | 1..1893 | 1..1893 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42240-RB | 17..1909 | 1..1893 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6330858..6332750 | 1..1893 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6330858..6332750 | 1..1893 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6330858..6332750 | 1..1893 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 6224891..6226783 | 1..1893 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6338956..6340848 | 1..1893 | 100 | Plus |
Translation from 199 to 741
> LD32923.pep MAFMMPVMKNNYDIYKDTRSRKTSECSNASSNGTTALATALGTPAQGQQQ QRRRKVSECKSESFATSPSHGQLGVSSPHQRMQMQRCHSSRAFPRNASRS SHGSLQQMVSPTRSSPPSRSHTASALERQAAAQAAAINQKQQQSAAAAAA VESSNDYTKFHLRLVDKLRKSFRKDSGKRS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20917-PA | 315 | GF20917-PA | 1..194 | 1..177 | 624 | 73.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19586-PA | 345 | GG19586-PA | 1..186 | 1..180 | 708 | 86.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24056-PA | 190 | GH24056-PA | 1..190 | 1..180 | 528 | 75.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG42240-PC | 180 | CG42240-PC | 1..180 | 1..180 | 907 | 100 | Plus |
CG42240-PA | 180 | CG42240-PA | 1..180 | 1..180 | 907 | 100 | Plus |
CG42240-PB | 346 | CG42240-PB | 1..180 | 1..180 | 907 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15185-PA | 313 | GI15185-PA | 1..177 | 1..169 | 513 | 74 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19985-PA | 165 | GL19985-PA | 6..165 | 33..180 | 393 | 65.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22636-PA | 191 | GA22636-PA | 1..191 | 1..180 | 619 | 73.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12482-PA | 335 | GM12482-PA | 1..176 | 1..179 | 701 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24755-PA | 180 | GD24755-PA | 1..180 | 1..180 | 925 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17065-PA | 345 | GJ17065-PA | 1..198 | 1..179 | 566 | 70.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19883-PA | 196 | GK19883-PA | 1..196 | 1..180 | 532 | 67.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16745-PA | 185 | GE16745-PA | 1..185 | 1..180 | 910 | 95.7 | Plus |
Translation from 281 to 1129
> LD32923.hyp MRVVTVQRLWPPLLERPPRDNNNSDAARCPNASRRASPPHHRTVNWACPP PTKGCKCSAATVRALFHATHRAVRTVRCSKWCRPRAVVRPAARTPHPHWK GRRPPRQPRLIKSNNSRPLQLLLLNLQMIIRSFICVWSTSCASPFARIAV SGHESSAITATTTKSTTTTMPAAAARRSFPFPTTITTTTTEPGGKLVTVP MPFPEEDRLEEMWRSAVLQRSRHWKRVREQPKRQHTENEREAWSVVWGYA SGDTVDSWPTPPMEALRRQKTRQRRRLAPWSS*