BDGP Sequence Production Resources |
Search the DGRC for LD32943
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 329 |
Well: | 43 |
Vector: | pOT2 |
Associated Gene/Transcript | nop5-RA |
Protein status: | LD32943.pep: gold |
Preliminary Size: | 1985 |
Sequenced Size: | 1810 |
Gene | Date | Evidence |
---|---|---|
CG10203 | 2001-01-01 | Release 2 assignment |
CG10206 | 2001-01-01 | Release 2 assignment |
CG10206 | 2001-10-10 | Blastp of sequenced clone |
CG10206 | 2003-01-01 | Sim4 clustering to Release 3 |
nop5 | 2008-04-29 | Release 5.5 accounting |
nop5 | 2008-08-15 | Release 5.9 accounting |
nop5 | 2008-12-18 | 5.12 accounting |
1810 bp (1810 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061401
> LD32943.complete CTTTTACACGCGGCATACGGAAAAGAAGGTTAAGTTGCTGCTGGCTGCCG AGAGTTTCGGTGGTTTTAAATTGAATTAAAATTGAAACTAAATGAGCAGA GCGTAACGCGATGTTTGTGCTCTACGAAACGCCGGCGGGCTACGCGATTT TCAAGCTGCTGGACGAAAAGAAACTGGAGCAGGTGGACAATCTGTACCAG GAGTTTGAGACTCCGGAGAAGGCCAACAAGCTGCTGAAGCTGAAGCACTT TGAGAAATTCAATGACACCACAGAGGCGCTGGCCGCTGCAACGGCGGCGG TGGAGGGCAAGGTAGCCAAGCCGCTGAAAAAGACACTCAAGAAGCTGCTC GTTGACGACGTGCAGTCTTCGCTCTTGGTTGCCGATGCCAAACTGGGCAC AGCCATCAAGGACAAACTGTCGGTACAGTGTGTCTGCAACACTGGCGTCC AGGAGCTGATGCGCTGTATTCGCCAGCAGGCGGACAGTCTGCTTGGTGGT CTGCCCAAGCGTGAGATGACCGCCATGGCCCTGGGTCTTGCCCACTCCTT GTCGCGCTACAAGCTTAAGTTCTCGCCCGACAAGATCGACACAATGATTG TGCAGGCCCAGTGCTTGCTGGATGACCTGGACAAGGAGTTGAACAACTAC ATGATGCGTGCACGCGAGTGGTACGGTTGGCACTTTCCCGAGCTGGGCAA GATTATTACCGACAACATTGCCTTCGTGAAGACCATCAAGTTGGTGGGCA CCAGGGATAATATGGCCACAAGCGATCTGTCCGACATTCTGCCAGAAGAT GTGGAGGAAAAGGTCAAGGAGGCAGCTGAGATCTCTATGGGTACCGAAAT CTCCGAGGAGGATGTGCTGAACATTCAGTGTCTGTGCGACGAGATCATAT CGATCAACGATTACCGCACCCACTTGTACGACTACTTGAAGGCCAGAATG ATGGCCATGGCTCCGAATTTGACAGTGCTCGTGGGCGACACCGTCGGCGC TCGACTGATTGCCCATGCTGGCTCGCTGATTAACCTGGCCAAGCATCCCT CATCTACTGTACAAATTCTGGGCGCCGAGAAAGCACTCTTCCGTGCGCTG AAGACCAAGAAGGATACTCCAAAGTACGGTTTGATCTATCACGCCCAGTT GGTGGGACAGGCAAGCCAGAAGAACAAGGGCAAAATGTCGCGTTCACTGG CCGCCAAAGCGTCGCTTGCCACGCGTGTTGATGCCTTTGGCGAAGAGGCT ACCTTTGAGCTAGGAGCGGCTCACAAGGTTAAACTGGAGTCTCGGCTGCG ACTCCTGGAGGAGGGCAACCTGCGCAAACTCTCCGGCACCGGCAAGGCCA AGGCCAAGTTCGAGAAGTACCAGGCCAAGAGCGAGGTGTTCACCTACCAA CCAGAGGCCGACAACACCTTGAACGTGAAGAAGAAGCGCAAGCACTCCGA GTCCGAACAGCAGACGCCTGTTAAGAAGGAGGAACCTGCTGAGGAGGAGG CGGAGGTCAAGTCCGAGAAGAAGAAGAAAAAGAAGAAGAAGCAGAAGGAC GAAGAGGTGGAGGCCGTTGAGGAGGCGGCAGCACCAGAGCCCGAGGATCA GCCAACACCAGCAAAGAAAAAGAAAAAGTCAAAGCACCAGGAGTAATTTC CCACCTTGACTAGTTAGTAGGCCTTAAGTTTTAGCATCATAGGTTACCTT ACTGTAAAGTATAGGATTTTATAATTACCAAAACGATTAAAGTTTCCGGT GTACATTAGAAATAAAATGTAATATTTGCATAACAAAATACAAAAAAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 6916440..6917820 | 1381..1 | 6830 | 99.6 | Minus |
chr2L | 23010047 | chr2L | 6915855..6916263 | 1791..1380 | 1950 | 98.8 | Minus |
chr3R | 27901430 | chr3R | 18243242..18243355 | 1106..993 | 210 | 78.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6917341..6918721 | 1381..1 | 6905 | 100 | Minus |
2L | 23513712 | 2L | 6916750..6917164 | 1794..1380 | 2075 | 100 | Minus |
3R | 32079331 | 3R | 22419629..22419816 | 1180..993 | 220 | 74.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6917341..6918721 | 1381..1 | 6905 | 100 | Minus |
2L | 23513712 | 2L | 6916750..6917164 | 1794..1380 | 2075 | 100 | Minus |
3R | 31820162 | 3R | 22160534..22160647 | 1106..993 | 210 | 78.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 6916440..6917820 | 1..1381 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nop5-RA | 1..1536 | 111..1646 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nop5-RA | 1..1536 | 111..1646 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nop5-RA | 1..1536 | 111..1646 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nop5-RA | 1..1536 | 111..1646 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nop5-RA | 1..1536 | 111..1646 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nop5-RA | 21..1811 | 1..1791 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nop5-RA | 21..1811 | 1..1791 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nop5-RA | 23..1813 | 1..1791 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nop5-RA | 21..1811 | 1..1791 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nop5-RA | 23..1813 | 1..1791 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6916753..6917162 | 1382..1791 | 100 | <- | Minus |
2L | 6917341..6918721 | 1..1381 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6916753..6917162 | 1382..1791 | 100 | <- | Minus |
2L | 6917341..6918721 | 1..1381 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6916753..6917162 | 1382..1791 | 100 | <- | Minus |
2L | 6917341..6918721 | 1..1381 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 6916753..6917162 | 1382..1791 | 100 | <- | Minus |
arm_2L | 6917341..6918721 | 1..1381 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6916753..6917162 | 1382..1791 | 100 | <- | Minus |
2L | 6917341..6918721 | 1..1381 | 100 | Minus |
Translation from 110 to 1645
> LD32943.pep MFVLYETPAGYAIFKLLDEKKLEQVDNLYQEFETPEKANKLLKLKHFEKF NDTTEALAAATAAVEGKVAKPLKKTLKKLLVDDVQSSLLVADAKLGTAIK DKLSVQCVCNTGVQELMRCIRQQADSLLGGLPKREMTAMALGLAHSLSRY KLKFSPDKIDTMIVQAQCLLDDLDKELNNYMMRAREWYGWHFPELGKIIT DNIAFVKTIKLVGTRDNMATSDLSDILPEDVEEKVKEAAEISMGTEISEE DVLNIQCLCDEIISINDYRTHLYDYLKARMMAMAPNLTVLVGDTVGARLI AHAGSLINLAKHPSSTVQILGAEKALFRALKTKKDTPKYGLIYHAQLVGQ ASQKNKGKMSRSLAAKASLATRVDAFGEEATFELGAAHKVKLESRLRLLE EGNLRKLSGTGKAKAKFEKYQAKSEVFTYQPEADNTLNVKKKRKHSESEQ QTPVKKEEPAEEEAEVKSEKKKKKKKKQKDEEVEAVEEAAAPEPEDQPTP AKKKKKSKHQE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14470-PA | 512 | GF14470-PA | 1..452 | 1..453 | 2223 | 97.8 | Plus |
Dana\GF16568-PA | 495 | GF16568-PA | 4..414 | 1..404 | 863 | 42.8 | Plus |
Dana\GF23690-PA | 501 | GF23690-PA | 100..341 | 162..401 | 312 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23571-PA | 508 | GG23571-PA | 1..508 | 1..511 | 2616 | 98.6 | Plus |
Dere\GG12519-PA | 497 | GG12519-PA | 4..414 | 1..404 | 860 | 42.8 | Plus |
Dere\GG15883-PA | 501 | GG15883-PA | 100..341 | 162..401 | 319 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13163-PA | 512 | GH13163-PA | 1..453 | 1..456 | 2204 | 96.1 | Plus |
Dgri\GH17505-PA | 498 | GH17505-PA | 4..414 | 1..404 | 847 | 43.1 | Plus |
Dgri\GH14529-PA | 503 | GH14529-PA | 104..345 | 162..401 | 290 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
nop5-PA | 511 | CG10206-PA | 1..511 | 1..511 | 2575 | 100 | Plus |
Nop56-PA | 496 | CG13849-PA | 4..495 | 1..487 | 850 | 40.2 | Plus |
Prp31-PA | 501 | CG6876-PA | 100..341 | 162..401 | 323 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17742-PA | 520 | GI17742-PA | 1..452 | 1..455 | 2190 | 96 | Plus |
Dmoj\GI10373-PA | 500 | GI10373-PA | 5..415 | 1..404 | 853 | 42.8 | Plus |
Dmoj\GI13100-PA | 503 | GI13100-PA | 104..345 | 162..401 | 319 | 30.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25602-PA | 517 | GL25602-PA | 1..455 | 1..454 | 2207 | 96.3 | Plus |
Dper\GL23339-PA | 500 | GL23339-PA | 4..414 | 1..404 | 855 | 43.4 | Plus |
Dper\GL24782-PA | 501 | GL24782-PA | 100..341 | 162..401 | 292 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28044-PA | 517 | GA28044-PA | 1..455 | 1..454 | 2212 | 96.5 | Plus |
Dpse\Nop56-PA | 503 | GA12569-PA | 4..502 | 1..487 | 819 | 40 | Plus |
Dpse\GA19924-PA | 501 | GA19924-PA | 100..341 | 162..401 | 292 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13736-PA | 509 | GM13736-PA | 1..509 | 1..511 | 2653 | 99.2 | Plus |
Dsec\GM23654-PA | 496 | GM23654-PA | 4..495 | 1..487 | 833 | 39.2 | Plus |
Dsec\GM25514-PA | 501 | GM25514-PA | 100..341 | 162..401 | 323 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22532-PA | 510 | GD22532-PA | 1..510 | 1..511 | 2671 | 99.6 | Plus |
Dsim\GD18461-PA | 496 | GD18461-PA | 4..495 | 1..487 | 832 | 39.2 | Plus |
Dsim\GD14529-PA | 501 | GD14529-PA | 100..341 | 162..401 | 323 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17567-PA | 518 | GJ17567-PA | 1..486 | 1..482 | 2250 | 92.2 | Plus |
Dvir\GJ22835-PA | 498 | GJ22835-PA | 4..414 | 1..404 | 847 | 42.3 | Plus |
Dvir\GJ13847-PA | 503 | GJ13847-PA | 104..345 | 162..401 | 318 | 30.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24250-PA | 516 | GK24250-PA | 1..464 | 1..465 | 2223 | 95.7 | Plus |
Dwil\GK14188-PA | 512 | GK14188-PA | 14..511 | 1..487 | 819 | 40 | Plus |
Dwil\GK20402-PA | 504 | GK20402-PA | 103..344 | 162..401 | 338 | 32.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18393-PA | 509 | GE18393-PA | 1..509 | 1..511 | 2601 | 98 | Plus |
Dyak\GE24041-PA | 497 | GE24041-PA | 4..496 | 1..487 | 829 | 39.9 | Plus |
Dyak\GE22227-PA | 501 | GE22227-PA | 100..341 | 162..401 | 319 | 31 | Plus |
Translation from 110 to 1645
> LD32943.hyp MFVLYETPAGYAIFKLLDEKKLEQVDNLYQEFETPEKANKLLKLKHFEKF NDTTEALAAATAAVEGKVAKPLKKTLKKLLVDDVQSSLLVADAKLGTAIK DKLSVQCVCNTGVQELMRCIRQQADSLLGGLPKREMTAMALGLAHSLSRY KLKFSPDKIDTMIVQAQCLLDDLDKELNNYMMRAREWYGWHFPELGKIIT DNIAFVKTIKLVGTRDNMATSDLSDILPEDVEEKVKEAAEISMGTEISEE DVLNIQCLCDEIISINDYRTHLYDYLKARMMAMAPNLTVLVGDTVGARLI AHAGSLINLAKHPSSTVQILGAEKALFRALKTKKDTPKYGLIYHAQLVGQ ASQKNKGKMSRSLAAKASLATRVDAFGEEATFELGAAHKVKLESRLRLLE EGNLRKLSGTGKAKAKFEKYQAKSEVFTYQPEADNTLNVKKKRKHSESEQ QTPVKKEEPAEEEAEVKSEKKKKKKKKQKDEEVEAVEEAAAPEPEDQPTP AKKKKKSKHQE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
nop5-PA | 511 | CG10206-PA | 1..511 | 1..511 | 2575 | 100 | Plus |
Nop56-PA | 496 | CG13849-PA | 4..495 | 1..487 | 850 | 40.2 | Plus |
Prp31-PA | 501 | CG6876-PA | 100..341 | 162..401 | 323 | 31 | Plus |