BDGP Sequence Production Resources |
Search the DGRC for LD32951
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 329 |
Well: | 51 |
Vector: | pOT2 |
Associated Gene/Transcript | Sin-RA |
Protein status: | LD32951.pep: gold |
Preliminary Size: | 1739 |
Sequenced Size: | 1612 |
Gene | Date | Evidence |
---|---|---|
Sin-RA | 2010-11-11 | Gleaning Pick By Joe Carlson |
1612 bp assembled on 2011-03-25
GenBank Submission: BT126277.1
> LD32951.complete GCAGACAAAACTATCAAATCGAAATTTAAATTATGGAAGACGAGGACGAT CCCGTCGTGGAGGAGATTCCCGTATTCCTGTCGAAGAACCTGAGGGACAG CCTGTATCTCTTTCAATACCCCACGAAAACGGAGCTCCCCAACCACGATG ACTCCGTGATTGTCAATTGTTGTGTAAAACCAATCGCCCAGGAGGTGAAG GTGGACTTCGGCCTGGACATTGAGTCGGCCCACTTCGATCGCTTCAAGGG CGAGCAATTTGCGGTGGCCGCCGACGGAAAGAACACCTATGGAGCAGTTC CACCAAAGGGTCAGGAGCGACCCACCTACAAACGTGGCATCATGGACAAA CAGGCCTTCACAAGCTCGCGTTCCATAACCGATGTGGCCAAGTACATAGT GGGCATCTTTACGGATCGGGAGGTGCATCTGTCGCCACTTACATCCATAG TCCAAATGCGACCCGTTCTCAGTCACTTCGATAAGGACGACAAGCGCAAG AAGGCGGAACTGAAGGCTCAAACGGAGGACACGGACGATGACGAGGTGCT GCAGCAGGTCACGGTTAAATTTGCACGAGGAAATGCCAAAAACAGCGGAA AGGAGCAACGTGTCGGCACCTACGACAGTTTCGTCCAGCGAATTGCGGAT GAGCCGTGGTGCGAGGCCTACTGGCACTCGAGGGGCACGCCCACCGCCGA ACTGGAGCGCCAGAAGCTCTTTGCCACCAGTCATCACGGCAGTTCCTCTT TGGCTCTCGCTCCTGACGAATATCTTCGAAAGCTTCTGCCCTACGACGAG CATGTGCAGACGGTAGCCCCAGCAGCTGCTTCTGCTGCCGCCCAAGTACT TCCCGTCTACAACAAGGCCATGCTTAAGTCTATGCCGCTGCTGGAACAGC TTACAGTGCTACTGAGAGATGCGCGGATGCTCTCGTTCAGCGACGTCATT AGTATTCTCGCGGAGCACGTGGATCCGCATGTGGCTGCCGACAAGGTGCT GGCTTTGCTGCCCCAGGTGGGCATCCTACTGCACGGCAACTGGGTGCCGA AATCCGAGGTGGTCTTTCCCGAGAAGGTGCTTTCCCATGCGAACGGTGTG TCCGCAGAGCAGATGATTCGCGCCAGAGATTATATACTCTTTCGTTTCTC CCGCACGCCCTACCTGTTCCGAGCTCAGGTAATGGCCGCCACCCAGTTAC CTCCTGCGGAAACACTTGACGTTTTGAAGACTGTGGCCCGGGTGAATAAC ACAAAACGGTGGGAGCTGCTACTGCCACCCGACAAGGAGTTCGAGCAAAA GTACCCGGAACTGGTCAGCCGACAGGAGTACCACTGGACCGCTTCCGAGC AGCACTACAATGAAATGGACTGGGCTAGGGAAACCAAACGTGTTCGGAAA CGTTCGACGAGGAAGAGCGAATCCCAGTCACTGACTTCAGCCATGCCGCC GCCCGCAATGAATCACTCAACAACTGGCTCCGTGGATGCGTAGCATCGGA TGATGATCTCCCAGCGGCGGAGAATCGGCAGCACGATTATACATCTAGGC ACTATTAAAAAGACCAACAATTTTACTTTGTTAAAAAAAAAAAAAAAAAA AAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 21020988..21022060 | 64..1136 | 5365 | 100 | Plus |
chr3L | 24539361 | chr3L | 21022125..21022570 | 1137..1582 | 2230 | 100 | Plus |
chr3L | 24539361 | chr3L | 21020866..21020930 | 1..65 | 325 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 21031979..21033051 | 64..1136 | 5365 | 100 | Plus |
3L | 28110227 | 3L | 21033116..21033564 | 1137..1585 | 2245 | 100 | Plus |
3L | 28110227 | 3L | 21031857..21031921 | 1..65 | 325 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 21025079..21026151 | 64..1136 | 5365 | 100 | Plus |
3L | 28103327 | 3L | 21026216..21026664 | 1137..1585 | 2245 | 100 | Plus |
3L | 28103327 | 3L | 21024957..21025021 | 1..65 | 325 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 21020866..21020930 | 1..65 | 100 | -> | Plus |
chr3L | 21020990..21022060 | 66..1136 | 100 | -> | Plus |
chr3L | 21022125..21022570 | 1137..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sin-RA | 1..1461 | 33..1493 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sin-RA | 1..1461 | 33..1493 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sin-RA | 1..1461 | 33..1493 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sin-RA | 61..1642 | 1..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sin-RA | 33..1614 | 1..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sin-RA | 33..1614 | 1..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21031857..21031921 | 1..65 | 100 | -> | Plus |
3L | 21031981..21033051 | 66..1136 | 100 | -> | Plus |
3L | 21033116..21033561 | 1137..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21031857..21031921 | 1..65 | 100 | -> | Plus |
3L | 21031981..21033051 | 66..1136 | 100 | -> | Plus |
3L | 21033116..21033561 | 1137..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21031857..21031921 | 1..65 | 100 | -> | Plus |
3L | 21031981..21033051 | 66..1136 | 100 | -> | Plus |
3L | 21033116..21033561 | 1137..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 21026216..21026661 | 1137..1582 | 100 | Plus | |
arm_3L | 21024957..21025021 | 1..65 | 100 | -> | Plus |
arm_3L | 21025081..21026151 | 66..1136 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21025081..21026151 | 66..1136 | 100 | -> | Plus |
3L | 21026216..21026661 | 1137..1582 | 100 | Plus | |
3L | 21024957..21025021 | 1..65 | 100 | -> | Plus |
Translation from 32 to 1492
> LD32951.pep MEDEDDPVVEEIPVFLSKNLRDSLYLFQYPTKTELPNHDDSVIVNCCVKP IAQEVKVDFGLDIESAHFDRFKGEQFAVAADGKNTYGAVPPKGQERPTYK RGIMDKQAFTSSRSITDVAKYIVGIFTDREVHLSPLTSIVQMRPVLSHFD KDDKRKKAELKAQTEDTDDDEVLQQVTVKFARGNAKNSGKEQRVGTYDSF VQRIADEPWCEAYWHSRGTPTAELERQKLFATSHHGSSSLALAPDEYLRK LLPYDEHVQTVAPAAASAAAQVLPVYNKAMLKSMPLLEQLTVLLRDARML SFSDVISILAEHVDPHVAADKVLALLPQVGILLHGNWVPKSEVVFPEKVL SHANGVSAEQMIRARDYILFRFSRTPYLFRAQVMAATQLPPAETLDVLKT VARVNNTKRWELLLPPDKEFEQKYPELVSRQEYHWTASEQHYNEMDWARE TKRVRKRSTRKSESQSLTSAMPPPAMNHSTTGSVDA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24293-PA | 490 | GF24293-PA | 1..486 | 1..483 | 2134 | 82.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16156-PA | 486 | GG16156-PA | 1..486 | 1..486 | 2563 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14565-PA | 483 | GH14565-PA | 1..476 | 1..475 | 1913 | 74.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sin-PA | 486 | CG10582-PA | 1..486 | 1..486 | 2514 | 100 | Plus |
Sin-PC | 485 | CG10582-PC | 10..485 | 11..486 | 2458 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13892-PA | 480 | GI13892-PA | 1..478 | 1..480 | 1958 | 75.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24473-PA | 115 | GL24473-PA | 1..114 | 1..114 | 495 | 75.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10413-PA | 476 | GA10413-PA | 1..469 | 1..475 | 1992 | 76.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22337-PA | 486 | GM22337-PA | 1..486 | 1..486 | 2578 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14927-PA | 486 | GD14927-PA | 1..486 | 1..486 | 2584 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11746-PA | 480 | GJ11746-PA | 1..478 | 1..480 | 2009 | 76.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25406-PA | 482 | GK25406-PA | 3..475 | 1..477 | 1973 | 75.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19724-PA | 487 | GE19724-PA | 1..487 | 1..486 | 2561 | 98.4 | Plus |
Translation from 32 to 1492
> LD32951.hyp MEDEDDPVVEEIPVFLSKNLRDSLYLFQYPTKTELPNHDDSVIVNCCVKP IAQEVKVDFGLDIESAHFDRFKGEQFAVAADGKNTYGAVPPKGQERPTYK RGIMDKQAFTSSRSITDVAKYIVGIFTDREVHLSPLTSIVQMRPVLSHFD KDDKRKKAELKAQTEDTDDDEVLQQVTVKFARGNAKNSGKEQRVGTYDSF VQRIADEPWCEAYWHSRGTPTAELERQKLFATSHHGSSSLALAPDEYLRK LLPYDEHVQTVAPAAASAAAQVLPVYNKAMLKSMPLLEQLTVLLRDARML SFSDVISILAEHVDPHVAADKVLALLPQVGILLHGNWVPKSEVVFPEKVL SHANGVSAEQMIRARDYILFRFSRTPYLFRAQVMAATQLPPAETLDVLKT VARVNNTKRWELLLPPDKEFEQKYPELVSRQEYHWTASEQHYNEMDWARE TKRVRKRSTRKSESQSLTSAMPPPAMNHSTTGSVDA*