Clone LD33094 Report

Search the DGRC for LD33094

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:330
Well:94
Vector:pOT2
Associated Gene/TranscriptLiprin-alpha-RA
Protein status:LD33094.pep: gold
Preliminary Size:4217
Sequenced Size:4447

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11199 2001-01-01 Release 2 assignment
CG11199 2003-01-01 Sim4 clustering to Release 3
CG11199 2003-02-15 Blastp of sequenced clone
Liprin-alpha 2008-04-29 Release 5.5 accounting
Liprin-alpha 2008-08-15 Release 5.9 accounting
Liprin-alpha 2008-12-18 5.12 accounting

Clone Sequence Records

LD33094.complete Sequence

4447 bp (4447 high quality bases) assembled on 2003-02-15

GenBank Submission: BT004484

> LD33094.complete
TAACACTGACCAGTTTCTCATCGTTAAAAAATCCATTTGGAATTCGGTTT
ATTTAATTAAAAGCAGCCGGGACACCTATGCGAAGGGCAAAAAGCGGCCA
GAGTTGTTGTTGCTGCTGCTGCCCAGCCGCCGTGCGATCGATCGGGTCTG
GCGGCCCCAACTAAATAATGTGGAACATGATGTGCGACGTAATGCCCACG
ATATCCGAGGATAGCATCTCGCAGCGCTCCTCGCAGTTTAGCGGGGAGGA
TGCCAACTTTGAGCAGCTGATGGTCTCCATGCTGGACGAGCGGGACAAGC
TGATGGACAGCCTGAGGGAGGCGCAGGAGCGGCTTAACGAGACGGAGAAC
AAGCTGCGTGACGTCGAGAAGGAGCGGGACAGCCTGCAGCGACAGATTAA
CGCTAATCTGCCGCAAGAGTTTGCCACCCTGACCAAGGAGCTGACGCAAG
CGCGGGAGACCCTTTTGGAACGTGACGAGGAGATTGGGGAGCTCAAGGCG
GAGAGGAATAATACCAGGCTTCTCCTCGAACATCTGGAGTGCTTGGTGTC
CCGCCACGAGCGTTCCCTGCGTATGACCGTTGTGAAGCGACAGGCTGCCG
CCCAGAGCGGCGTCTCCAGCGAGGTGGAAGTGCTCAAGGCGCTAAAGTCG
CTGTTCGAGCACCACAAGGCGCTGGACGAGAAGGTGCGCGAGCGGTTGCG
GCTTTCCATCGAGAAGAACAACATGATGGAAGAGGAACTCAGCTCTGCCA
AGGAGGAACTGGCCCAGTACAAGGCGGGCGTGGTGCCAGCTGGCGTGGGC
AGTGGCAGCGGAGCAGGGAGTGCCGCAACCACCGCCGGTGGTGGGGGCGC
CGAGAACGGGCTCAAAGAGAAGATGGCGGGCGTGGGCGGATCTGGTGGCG
TTAATGGCGAGGCAAATGAGCTGAACGACTACGCAGCCAAAACCCACGAG
CTGCAAACCATTATTGAGAAGCAGACCTCGGAACTTTCACAATGGCAGCG
ACGCGTTTCTGATTTGAACAACAAGATTAGTGAGCTTGAGGAGAACATGT
CGCGAGTGCAAAAGGAACACTGCAAGGCCCAAGACCAGTGTGCCAAGCTG
CAGCGGGATCTGCGCGAGAATGTTGCCCAGAAAGAGGATCAGGAGGAGCG
CATTACCACATTGGAAAAGCGATACCTGAATGCTCAGAGGGAGTCTACAT
CGTTGCATGATCTCAACGAGAAACTCGAGCAGGAACTACGGCATAAAGAG
GCGCAGCTCAAGCTGCACGAGGAGAAGATCGGGGCCATCGAGGAGAAGCT
GGAGCTCTCCGAACAGAAGCTCGCCCAGCACGCCAAGCTGCAGCCCGACA
TGGAAGAGCAGCTAAAGGCACGCATGGAGGCATTGACTAAGGCTCAAGAA
AGACACGGTTCTGCAGAAGACCGCATCCGGGGACTGGAGACGAACCTCGA
CGAGAAGACCAACGAGGTGGTAAGACTGAACCAGCGTCTGAAGATGAACG
AGGAGCACAACCTACGGCTTTCCTCCACGGTGGATAAGCTGCTCTCGGAG
TCAAACGAGCGTCTGCAAGTGCACCTGAAGGAGCGTATGCATGCGCTGGA
CGAGAAGAACGCCCTCACCCAGGAACTGGAAAAGGCGCGTAAGGTGGCCG
AGGAGCTACACCACGAGAAGAGCGAAATCATGAAGGAGCTTTCGAAGACG
CGCCTGGAGATCGAGAACTTTAAGCGGCAGCTGCTGCAGCAGGAGATCGC
CTACAACATCCAGCAAACGGAGGCGCTCACGCGGAGCCTTTCGCCCAGTA
GCGTAGTGGACCCCAGTGGCGCCTTCAGCCGGAGCAATTCGCACGCCAGC
TTTGAGACGCACTCCCTGCGCCGCCAGAGCAAACAGCGACTGTCCGAGGA
GAACGCCCTGGTCCGCTCCATGGCCGAGCAGGAATGGGAAAAACTGCAGC
AGGCGGCGCATGCCCAGCAGCAGGCCTACGAGCTGGCCAGCGCTGCGGAT
TGCGATGACTCTGATGTCCTGTACGCAGCGGCCACCGACATGATGTCTCC
TTCGGGACACACAGATGCCCAGACATTGGCCATGATGCTGCAGGAACAGT
TGGACGCCATTAACAATGAGATTCGCCTGATCCAGGAGGAAAAGCAGTCA
ACAGAGGCGCGGGCCGAGGAGCTGGAGTCGCGTGTCGGCAGTCTGGAGCA
CGTAAACCTGCTGGCTCGCGGTCGCTCCATGGACAGGCAGAGTCCGCCAA
TGAGTGGCCGGAGCACGCCCAACAGTCCGCAGCGGGATTTCATGCAGAAG
TATCACACGCTCAACTTGCCCGTGCTGTCCAGCGATGCCTCTCGCGAAGA
GCTCCACGGCGGCATGTCCACCACAGGTGATTCGAGTTCCGGCGGAGCGG
CCTCTCCACTGACCGCCCGCTCTATGCGCCTGGAGCGTGTGGCCCAGGCC
TTGGCCCACAGCCAGGAGGAGCTAAGGCGGCGTTCCATTGGCCTTAATCC
CAATGCTTCAGTGGCGCCCAACCACACTGGCGGTCACATGCCCCTGAGCA
GCCACAGTTACGGACTGTCGCCGCTTAGCTCTCGTTACGGCAGCCAGGAG
TCACTGCGTCACTATAACACAATGGGATCTATGTCCATGCTGCAGACACC
TACTTCGGGCGTATCCAGGGAAGCGGCAGCCGCTGCTGTCCAAAAGAAGA
AGGGCATTAAGTCCTCGCTGGGTAGGTTCTTTAGCAAAAAGGAGAAGGTG
AAGGGCGTGAAGGATACGCTGCCCGACGGCTCGCCCAGCATGATGTCCAT
TGGCAACCTGTCGATTGGACTGAGCGAGGTGGACTCCAACTATGATGCTA
TGAGCATGACTGGCGGAATGATGCCCCGCATTGCCAGCTCCCAGGGATCC
AAAATAAGCAGCGTTGACTACGGCAGGCAGAAGAAGGAGCATGATTACCG
CAATGACTTGCTGGGGGAGGCCATGAAGGCGGGCACACCGTTTGCCCTGT
GGAATGGCCCCACCATAGTCGCCTGGTTGGAACTGTGGGTGGGCATGCCA
GCCTGGTATGTTGCCGCCTGTCGAGCCAATGTCAAGTCCGGGGCCATCAT
GAGTGCGTTAAGCGATACGGAAATTCAGCGGGAAATTGGCATCAGTAATC
CCTTGCACAGGCTCAAACTTCGGCTGGCCATTCAGGAAATGGTTTCACTG
ACCTCTCCCTCGGCGCCACAAACCTCTCGCACCACTCTGGCATTTGGCGA
TATGAACCATGAGTGGATCGGTAACTATTGGTTGCCAGGTCTTGGCCTGC
CCCAATATCGCACAACCTTCATGGAGTGTCTGGTGGATGCCCGGATGCTG
GACCACCTCACCAAAAAGGACTTGCGTGGTCAGCTCAAAATGGTGGATAG
TTTCCATCGCACCAGCCTACAGTACGGCATATCGATGCTCAAGCGCCTTA
ACTACGATCGCACGGAGTTGGAGCACAGGCGCAAGATGAGTGAAAACGGC
CTGTGTGACGTACTAGTCTGGAGCAACGAGAGAGTTATCCGATGGGTTGG
CAGCATCGGATTGAAGGAATATGCTAATAACTTGCTCGAATCGGGAGTGC
ATGGAGGATTGATGGCCCTGGACGAGGGTTTCGATGCGAATGCCATGGGC
TTGGCCCTTCAAATACCTACACAAAATGCTCAGGCTCGCCAAATACTTGA
CACGGAGTTTAATAATCTGCTGCAGATTGCCACAGATCGCAGGCCGGAGA
ATGAGCAGCGCAGTGCTTCCTGATGCAGCTACAGCCCGCCCACGTCCTCG
GTGGATGAGTGAGCACCAGCCAAGGGGGGCAGGACGAAAAACAGACAACA
AAGGCAACCTACAACAATAATAACGTAAAGACCAGGGGCAAAGTTTCCTA
AACAGCAACAGCAACCGTAACGACAAGCTGAACTAGAAGAGATGAATGAA
AATGCTAGCAAGCAACTAAGCCACAAAAAATCTAACAAGAAAGACGCAAC
GCAAGAGACTCCCCAGCATGATGCACGTCTAATCCACATATTTAATATAT
ATAAATACACGCATAGTCACATAATCCATAACAAGACAATGTATACAAGA
CATAGCACATACTCTACATAGGGCATACGTAGTTGCATTGGCGCCAAGTC
GCTGCCGCTGCCAGGCGTGTACAAGTTTTAGAAGCTAATCAGTTTTCGAT
TGTAAAATTATTATTGTATTTTTTTATATAGTGTAATTGGGCTTGCAATA
GACTAACAGTATTTTGTTTTAGATGATGCAGAGGTGGAAAGAGATGACAG
CGTGCTTCGAACCAAATTCGTAACCAAACTTGTTTGTTATATAATTTTTA
TGGCATTTGTACAGTTATTAATTTAATCCAATTTTAATTTCTTTAAAATT
AAAACAACTAACATACGCTTTACATATGAAAAAAAAAAAAAAAAAAA

LD33094.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:20:42
Subject Length Description Subject Range Query Range Score Percent Strand
Liprin-alpha.p 5732 Liprin-alpha.p 1467..4507 1389..4429 15205 100 Plus
Liprin-alpha.n 4951 Liprin-alpha.n 1467..4507 1389..4429 15205 100 Plus
Liprin-alpha.k 5456 Liprin-alpha.k 1467..4507 1389..4429 15205 100 Plus
Liprin-alpha.p 5732 Liprin-alpha.p 67..1458 1..1392 6960 100 Plus
Liprin-alpha.n 4951 Liprin-alpha.n 67..1458 1..1392 6960 100 Plus
Liprin-alpha.k 5456 Liprin-alpha.k 67..1458 1..1392 6960 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:07:17
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 6726912..6727831 1390..2309 4510 99.3 Plus
chr2L 23010047 chr2L 6729648..6730394 3682..4428 3690 99.6 Plus
chr2L 23010047 chr2L 6727928..6728555 2309..2936 3110 99.7 Plus
chr2L 23010047 chr2L 6724826..6725180 518..872 1775 100 Plus
chr2L 23010047 chr2L 6729097..6729418 3246..3567 1610 100 Plus
chr2L 23010047 chr2L 6723877..6724148 146..417 1360 100 Plus
chr2L 23010047 chr2L 6728621..6728831 2936..3146 1010 98.6 Plus
chr2L 23010047 chr2L 6725421..6725592 972..1143 845 99.4 Plus
chr2L 23010047 chr2L 6722990..6723135 1..146 730 100 Plus
chr2L 23010047 chr2L 6726243..6726374 1261..1392 660 100 Plus
chr2L 23010047 chr2L 6725648..6725769 1141..1262 610 100 Plus
chr2L 23010047 chr2L 6729471..6729591 3564..3684 605 100 Plus
chr2L 23010047 chr2L 6728877..6728986 3138..3247 550 100 Plus
chr2L 23010047 chr2L 6725251..6725354 871..974 520 100 Plus
chr2L 23010047 chr2L 6724209..6724310 417..518 510 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:27:17 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:07:14
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6727861..6728780 1390..2309 4600 100 Plus
2L 23513712 2L 6730597..6731344 3682..4429 3740 100 Plus
2L 23513712 2L 6728877..6729504 2309..2936 3140 100 Plus
2L 23513712 2L 6725775..6726129 518..872 1775 100 Plus
2L 23513712 2L 6730046..6730367 3246..3567 1610 100 Plus
2L 23513712 2L 6724826..6725097 146..417 1360 100 Plus
2L 23513712 2L 6729570..6729780 2936..3146 1025 99.1 Plus
2L 23513712 2L 6726370..6726541 972..1143 860 100 Plus
2L 23513712 2L 6723939..6724084 1..146 730 100 Plus
2L 23513712 2L 6727192..6727323 1261..1392 660 100 Plus
2L 23513712 2L 6726597..6726718 1141..1262 610 100 Plus
2L 23513712 2L 6730420..6730540 3564..3684 605 100 Plus
2L 23513712 2L 6729826..6729935 3138..3247 550 100 Plus
2L 23513712 2L 6726200..6726303 871..974 520 100 Plus
2L 23513712 2L 6725158..6725259 417..518 510 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:59:24
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6727861..6728780 1390..2309 4600 100 Plus
2L 23513712 2L 6730597..6731344 3682..4429 3740 100 Plus
2L 23513712 2L 6728877..6729504 2309..2936 3140 100 Plus
2L 23513712 2L 6725775..6726129 518..872 1775 100 Plus
2L 23513712 2L 6730046..6730367 3246..3567 1610 100 Plus
2L 23513712 2L 6724826..6725097 146..417 1360 100 Plus
2L 23513712 2L 6729570..6729780 2936..3146 1025 99 Plus
2L 23513712 2L 6726370..6726541 972..1143 860 100 Plus
2L 23513712 2L 6723939..6724084 1..146 730 100 Plus
2L 23513712 2L 6727192..6727323 1261..1392 660 100 Plus
2L 23513712 2L 6726597..6726718 1141..1262 610 100 Plus
2L 23513712 2L 6730420..6730540 3564..3684 605 100 Plus
2L 23513712 2L 6729826..6729935 3138..3247 550 100 Plus
2L 23513712 2L 6726200..6726303 871..974 520 100 Plus
2L 23513712 2L 6725158..6725259 417..518 510 100 Plus
Blast to na_te.dros performed 2019-03-16 11:07:15
Subject Length Description Subject Range Query Range Score Percent Strand
rover 7318 rover ROVER 7318bp 735..797 4396..4332 140 70.8 Minus
rover 7318 rover ROVER 7318bp 886..948 4396..4332 140 70.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2312..2405 3829..3926 137 64.3 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3298..3383 3901..3992 130 65.2 Plus
rover 7318 rover ROVER 7318bp 1037..1088 4396..4345 125 71.2 Minus

LD33094.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:08:18 Download gff for LD33094.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 6726245..6726373 1263..1391 100 -> Plus
chr2L 6722990..6723135 1..146 100 -> Plus
chr2L 6723878..6724147 147..416 100 -> Plus
chr2L 6724209..6724310 417..518 100 -> Plus
chr2L 6724827..6725180 519..872 100 -> Plus
chr2L 6725253..6725354 873..974 100 -> Plus
chr2L 6725424..6725591 975..1142 99 -> Plus
chr2L 6725650..6725769 1143..1262 100 -> Plus
chr2L 6726914..6727831 1392..2309 99 -> Plus
chr2L 6727929..6728554 2310..2935 99 -> Plus
chr2L 6728621..6728823 2936..3138 99 -> Plus
chr2L 6728878..6728985 3139..3246 100 -> Plus
chr2L 6729098..6729417 3247..3566 100 -> Plus
chr2L 6729474..6729590 3567..3683 100 -> Plus
chr2L 6729650..6730394 3684..4428 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:14:48 Download gff for LD33094.complete
Subject Subject Range Query Range Percent Splice Strand
Liprin-alpha-RA 1..3606 168..3773 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:50:50 Download gff for LD33094.complete
Subject Subject Range Query Range Percent Splice Strand
Liprin-alpha-RA 1..3606 168..3773 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 11:33:20 Download gff for LD33094.complete
Subject Subject Range Query Range Percent Splice Strand
Liprin-alpha-RE 1..3645 168..3812 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:42:01 Download gff for LD33094.complete
Subject Subject Range Query Range Percent Splice Strand
Liprin-alpha-RA 1..3606 168..3773 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:27:23 Download gff for LD33094.complete
Subject Subject Range Query Range Percent Splice Strand
Liprin-alpha-RE 1..3645 168..3812 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:04:12 Download gff for LD33094.complete
Subject Subject Range Query Range Percent Splice Strand
Liprin-alpha-RA 33..4460 1..4428 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:50:50 Download gff for LD33094.complete
Subject Subject Range Query Range Percent Splice Strand
Liprin-alpha-RA 33..4460 1..4428 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:33:20 Download gff for LD33094.complete
Subject Subject Range Query Range Percent Splice Strand
Liprin-alpha-RA 37..4464 1..4428 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:42:02 Download gff for LD33094.complete
Subject Subject Range Query Range Percent Splice Strand
Liprin-alpha-RA 33..4460 1..4428 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:27:23 Download gff for LD33094.complete
Subject Subject Range Query Range Percent Splice Strand
Liprin-alpha-RA 37..4464 1..4428 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:08:18 Download gff for LD33094.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6726202..6726303 873..974 100 -> Plus
2L 6723939..6724084 1..146 100 -> Plus
2L 6724827..6725096 147..416 100 -> Plus
2L 6725158..6725259 417..518 100 -> Plus
2L 6725776..6726129 519..872 100 -> Plus
2L 6726373..6726540 975..1142 100 -> Plus
2L 6726599..6726718 1143..1262 100 -> Plus
2L 6727194..6727322 1263..1391 100 -> Plus
2L 6727863..6728780 1392..2309 100 -> Plus
2L 6728878..6729503 2310..2935 100 -> Plus
2L 6729570..6729772 2936..3138 100 -> Plus
2L 6729827..6729934 3139..3246 100 -> Plus
2L 6730047..6730366 3247..3566 100 -> Plus
2L 6730423..6730539 3567..3683 100 -> Plus
2L 6730599..6731343 3684..4428 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:08:18 Download gff for LD33094.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6726202..6726303 873..974 100 -> Plus
2L 6723939..6724084 1..146 100 -> Plus
2L 6724827..6725096 147..416 100 -> Plus
2L 6725158..6725259 417..518 100 -> Plus
2L 6725776..6726129 519..872 100 -> Plus
2L 6726373..6726540 975..1142 100 -> Plus
2L 6726599..6726718 1143..1262 100 -> Plus
2L 6727194..6727322 1263..1391 100 -> Plus
2L 6727863..6728780 1392..2309 100 -> Plus
2L 6728878..6729503 2310..2935 100 -> Plus
2L 6729570..6729772 2936..3138 100 -> Plus
2L 6729827..6729934 3139..3246 100 -> Plus
2L 6730047..6730366 3247..3566 100 -> Plus
2L 6730423..6730539 3567..3683 100 -> Plus
2L 6730599..6731343 3684..4428 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:08:18 Download gff for LD33094.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6726202..6726303 873..974 100 -> Plus
2L 6723939..6724084 1..146 100 -> Plus
2L 6724827..6725096 147..416 100 -> Plus
2L 6725158..6725259 417..518 100 -> Plus
2L 6725776..6726129 519..872 100 -> Plus
2L 6726373..6726540 975..1142 100 -> Plus
2L 6726599..6726718 1143..1262 100 -> Plus
2L 6727194..6727322 1263..1391 100 -> Plus
2L 6727863..6728780 1392..2309 100 -> Plus
2L 6728878..6729503 2310..2935 100 -> Plus
2L 6729570..6729772 2936..3138 100 -> Plus
2L 6729827..6729934 3139..3246 100 -> Plus
2L 6730047..6730366 3247..3566 100 -> Plus
2L 6730423..6730539 3567..3683 100 -> Plus
2L 6730599..6731343 3684..4428 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:33:20 Download gff for LD33094.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6723939..6724084 1..146 100 -> Plus
arm_2L 6724827..6725096 147..416 100 -> Plus
arm_2L 6725158..6725259 417..518 100 -> Plus
arm_2L 6725776..6726129 519..872 100 -> Plus
arm_2L 6726202..6726303 873..974 100 -> Plus
arm_2L 6726373..6726540 975..1142 100 -> Plus
arm_2L 6726599..6726718 1143..1262 100 -> Plus
arm_2L 6727194..6727322 1263..1391 100 -> Plus
arm_2L 6727863..6728780 1392..2309 100 -> Plus
arm_2L 6728878..6729503 2310..2935 100 -> Plus
arm_2L 6729570..6729772 2936..3138 100 -> Plus
arm_2L 6729827..6729934 3139..3246 100 -> Plus
arm_2L 6730047..6730366 3247..3566 100 -> Plus
arm_2L 6730423..6730539 3567..3683 100 -> Plus
arm_2L 6730599..6731343 3684..4428 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:12:40 Download gff for LD33094.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6729570..6729772 2936..3138 100 -> Plus
2L 6729827..6729934 3139..3246 100 -> Plus
2L 6727194..6727322 1263..1391 100 -> Plus
2L 6730047..6730366 3247..3566 100 -> Plus
2L 6730423..6730539 3567..3683 100 -> Plus
2L 6724827..6725096 147..416 100 -> Plus
2L 6725158..6725259 417..518 100 -> Plus
2L 6725776..6726129 519..872 100 -> Plus
2L 6726202..6726303 873..974 100 -> Plus
2L 6726373..6726540 975..1142 100 -> Plus
2L 6726599..6726718 1143..1262 100 -> Plus
2L 6727863..6728780 1392..2309 100 -> Plus
2L 6728878..6729503 2310..2935 100 -> Plus
2L 6730599..6731343 3684..4428 100   Plus
2L 6723939..6724084 1..146 100 -> Plus

LD33094.pep Sequence

Translation from 167 to 3772

> LD33094.pep
MWNMMCDVMPTISEDSISQRSSQFSGEDANFEQLMVSMLDERDKLMDSLR
EAQERLNETENKLRDVEKERDSLQRQINANLPQEFATLTKELTQARETLL
ERDEEIGELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAAAQSGVS
SEVEVLKALKSLFEHHKALDEKVRERLRLSIEKNNMMEEELSSAKEELAQ
YKAGVVPAGVGSGSGAGSAATTAGGGGAENGLKEKMAGVGGSGGVNGEAN
ELNDYAAKTHELQTIIEKQTSELSQWQRRVSDLNNKISELEENMSRVQKE
HCKAQDQCAKLQRDLRENVAQKEDQEERITTLEKRYLNAQRESTSLHDLN
EKLEQELRHKEAQLKLHEEKIGAIEEKLELSEQKLAQHAKLQPDMEEQLK
ARMEALTKAQERHGSAEDRIRGLETNLDEKTNEVVRLNQRLKMNEEHNLR
LSSTVDKLLSESNERLQVHLKERMHALDEKNALTQELEKARKVAEELHHE
KSEIMKELSKTRLEIENFKRQLLQQEIAYNIQQTEALTRSLSPSSVVDPS
GAFSRSNSHASFETHSLRRQSKQRLSEENALVRSMAEQEWEKLQQAAHAQ
QQAYELASAADCDDSDVLYAAATDMMSPSGHTDAQTLAMMLQEQLDAINN
EIRLIQEEKQSTEARAEELESRVGSLEHVNLLARGRSMDRQSPPMSGRST
PNSPQRDFMQKYHTLNLPVLSSDASREELHGGMSTTGDSSSGGAASPLTA
RSMRLERVAQALAHSQEELRRRSIGLNPNASVAPNHTGGHMPLSSHSYGL
SPLSSRYGSQESLRHYNTMGSMSMLQTPTSGVSREAAAAAVQKKKGIKSS
LGRFFSKKEKVKGVKDTLPDGSPSMMSIGNLSIGLSEVDSNYDAMSMTGG
MMPRIASSQGSKISSVDYGRQKKEHDYRNDLLGEAMKAGTPFALWNGPTI
VAWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLK
LRLAIQEMVSLTSPSAPQTSRTTLAFGDMNHEWIGNYWLPGLGLPQYRTT
FMECLVDARMLDHLTKKDLRGQLKMVDSFHRTSLQYGISMLKRLNYDRTE
LEHRRKMSENGLCDVLVWSNERVIRWVGSIGLKEYANNLLESGVHGGLMA
LDEGFDANAMGLALQIPTQNAQARQILDTEFNNLLQIATDRRPENEQRSA
S*

LD33094.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 07:07:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14949-PA 1203 GF14949-PA 1..1203 1..1201 6146 96.1 Plus
Dana\GF13024-PA 1134 GF13024-PA 698..934 941..1185 555 44.5 Plus
Dana\GF23472-PA 687 GF23472-PA 340..598 924..1185 262 30.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 07:07:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10430-PA 1202 GG10430-PA 1..1202 1..1201 6371 99.7 Plus
Dere\GG20699-PA 1172 GG20699-PA 737..973 941..1185 555 44.5 Plus
Dere\GG15652-PA 680 GG15652-PA 342..600 924..1185 296 30.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 07:07:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10707-PA 1188 GH10707-PA 1..1188 1..1201 5806 93.2 Plus
Dgri\GH20090-PA 1191 GH20090-PA 765..1001 941..1185 552 44.1 Plus
Dgri\GH14825-PA 723 GH14825-PA 400..643 942..1185 287 31.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:27:18
Subject Length Description Subject Range Query Range Score Percent Strand
Liprin-alpha-PE 1214 CG11199-PE 1..1201 1..1201 6060 100 Plus
Liprin-alpha-PA 1201 CG11199-PA 1..1201 1..1201 6060 100 Plus
Liprin-alpha-PB 1201 CG11199-PB 1..1201 1..1201 6060 100 Plus
Liprin-alpha-PD 1205 CG11199-PD 1..1205 1..1201 6045 99.7 Plus
Liprin-alpha-PC 1158 CG11199-PC 1..1158 1..1201 5490 92 Plus
Liprin-gamma-PD 852 CG11206-PD 248..824 563..1185 526 28.7 Plus
Liprin-gamma-PB 1023 CG11206-PB 248..824 563..1185 526 28.7 Plus
Liprin-gamma-PA 1023 CG11206-PA 248..824 563..1185 526 28.7 Plus
Liprin-gamma-PE 1082 CG11206-PE 307..883 563..1185 526 28.7 Plus
Liprin-gamma-PC 1152 CG11206-PC 377..953 563..1185 526 28.7 Plus
Liprin-beta-PC 680 CG10743-PC 342..600 924..1185 285 30.9 Plus
Liprin-beta-PA 680 CG10743-PA 342..600 924..1185 285 30.9 Plus
Liprin-beta-PB 680 CG10743-PB 342..600 924..1185 285 30.9 Plus
Gmap-PC 1208 CG33206-PC 469..1168 44..811 230 22.3 Plus
Gmap-PB 1208 CG33206-PB 469..1168 44..811 230 22.3 Plus
Gmap-PA 1398 CG33206-PA 659..1358 44..811 230 22.3 Plus
lva-PD 2779 CG6450-PD 835..1534 23..668 225 19.3 Plus
lva-PC 2779 CG6450-PC 835..1534 23..668 225 19.3 Plus
zip-PH 1964 CG15792-PH 927..1692 14..677 221 20.7 Plus
zip-PG 1971 CG15792-PG 919..1684 14..677 221 20.7 Plus
zip-PE 1971 CG15792-PE 919..1684 14..677 221 20.7 Plus
zip-PC 1971 CG15792-PC 919..1684 14..677 221 20.7 Plus
zip-PF 1979 CG15792-PF 927..1692 14..677 221 20.7 Plus
zip-PB 2011 CG15792-PB 959..1724 14..677 221 20.7 Plus
zip-PD 2016 CG15792-PD 964..1729 14..677 221 20.7 Plus
zip-PI 2024 CG15792-PI 972..1737 14..677 221 20.7 Plus
zip-PA 2056 CG15792-PA 1004..1769 14..677 221 20.7 Plus
Golgin245-PA 1489 CG3493-PA 548..1258 14..728 218 19.8 Plus
sti-PA 1854 CG10522-PA 620..1186 7..577 218 19.7 Plus
sti-PB 1858 CG10522-PB 624..1190 7..577 218 19.7 Plus
CLIP-190-PN 1598 CG5020-PN 841..1507 17..671 217 19.4 Plus
CLIP-190-PR 1601 CG5020-PR 844..1510 17..671 217 19.4 Plus
CLIP-190-PP 1623 CG5020-PP 866..1532 17..671 217 19.4 Plus
CLIP-190-PC 1652 CG5020-PC 895..1561 17..671 217 19.4 Plus
CLIP-190-PS 1653 CG5020-PS 896..1562 17..671 217 19.4 Plus
CLIP-190-PM 1668 CG5020-PM 911..1577 17..671 217 19.4 Plus
CLIP-190-PB 1689 CG5020-PB 932..1598 17..671 217 19.4 Plus
CLIP-190-PA 1690 CG5020-PA 933..1599 17..671 217 19.4 Plus
CG4119-PB 998 CG4119-PB 198..918 128..890 212 21.7 Plus
CG4119-PA 998 CG4119-PA 198..918 128..890 212 21.7 Plus
CLIP-190-PS 1653 CG5020-PS 365..1087 18..680 210 19.4 Plus
Golgin245-PA 1489 CG3493-PA 285..890 51..682 205 20.7 Plus
zip-PH 1964 CG15792-PH 1179..1781 14..675 202 18.4 Plus
zip-PG 1971 CG15792-PG 1171..1773 14..675 202 18.4 Plus
zip-PE 1971 CG15792-PE 1171..1773 14..675 202 18.4 Plus
zip-PC 1971 CG15792-PC 1171..1773 14..675 202 18.4 Plus
zip-PF 1979 CG15792-PF 1179..1781 14..675 202 18.4 Plus
zip-PB 2011 CG15792-PB 1211..1813 14..675 202 18.4 Plus
zip-PD 2016 CG15792-PD 1216..1818 14..675 202 18.4 Plus
zip-PI 2024 CG15792-PI 1224..1826 14..675 202 18.4 Plus
zip-PA 2056 CG15792-PA 1256..1858 14..675 202 18.4 Plus
mud-PI 2113 CG12047-PI 1226..1889 32..676 200 19.8 Plus
mud-PJ 2165 CG12047-PJ 1226..1889 32..676 200 19.8 Plus
mud-PH 2567 CG12047-PH 1226..1889 32..676 200 19.8 Plus
CLIP-190-PN 1598 CG5020-PN 273..1032 22..680 195 20.5 Plus
CLIP-190-PP 1623 CG5020-PP 298..1057 22..680 195 20.5 Plus
CLIP-190-PC 1652 CG5020-PC 327..1086 22..680 195 20.5 Plus
CLIP-190-PM 1668 CG5020-PM 343..1102 22..680 195 20.5 Plus
CLIP-190-PB 1689 CG5020-PB 364..1123 22..680 195 20.5 Plus
CLIP-190-PA 1690 CG5020-PA 365..1124 22..680 195 20.5 Plus
CLIP-190-PN 1598 CG5020-PN 682..1461 13..700 194 20.4 Plus
CLIP-190-PR 1601 CG5020-PR 685..1464 13..700 194 20.4 Plus
CLIP-190-PP 1623 CG5020-PP 707..1486 13..700 194 20.4 Plus
CLIP-190-PC 1652 CG5020-PC 736..1515 13..700 194 20.4 Plus
CLIP-190-PS 1653 CG5020-PS 737..1516 13..700 194 20.4 Plus
CLIP-190-PM 1668 CG5020-PM 752..1531 13..700 194 20.4 Plus
CLIP-190-PB 1689 CG5020-PB 773..1552 13..700 194 20.4 Plus
CLIP-190-PA 1690 CG5020-PA 774..1553 13..700 194 20.4 Plus
mud-PG 1933 CG12047-PG 1226..1886 32..673 194 19.6 Plus
mud-PF 2394 CG12047-PF 1226..1886 32..673 194 19.6 Plus
brp-PL 1781 CG42344-PL 409..1031 39..692 191 21.2 Plus
brp-PL 1781 CG42344-PL 798..1532 38..677 190 21.9 Plus
brp-PH 1740 CG42344-PH 757..1491 38..677 190 21.9 Plus
brp-PE 1740 CG42344-PE 757..1491 38..677 190 21.9 Plus
brp-PD 1740 CG42344-PD 757..1491 38..677 190 21.9 Plus
brp-PG 1786 CG42344-PG 803..1537 38..677 190 21.9 Plus
Root-PF 2048 CG6129-PF 345..949 53..673 190 19.9 Plus
CLIP-190-PR 1601 CG5020-PR 292..1035 32..680 189 20.3 Plus
brp-PL 1781 CG42344-PL 231..972 32..771 188 19.2 Plus
CLIP-190-PN 1598 CG5020-PN 525..1222 6..677 184 17.9 Plus
CLIP-190-PR 1601 CG5020-PR 528..1225 6..677 184 17.9 Plus
CLIP-190-PP 1623 CG5020-PP 550..1247 6..677 184 17.9 Plus
CLIP-190-PC 1652 CG5020-PC 579..1276 6..677 184 17.9 Plus
CLIP-190-PS 1653 CG5020-PS 580..1277 6..677 184 17.9 Plus
CLIP-190-PM 1668 CG5020-PM 595..1292 6..677 184 17.9 Plus
CLIP-190-PB 1689 CG5020-PB 616..1313 6..677 184 17.9 Plus
CLIP-190-PA 1690 CG5020-PA 617..1314 6..677 184 17.9 Plus
Gmap-PC 1208 CG33206-PC 393..843 250..680 181 20.5 Plus
Gmap-PB 1208 CG33206-PB 393..843 250..680 181 20.5 Plus
Gmap-PA 1398 CG33206-PA 583..1033 250..680 181 20.5 Plus
zip-PH 1964 CG15792-PH 907..1360 261..668 175 20.2 Plus
zip-PG 1971 CG15792-PG 899..1352 261..668 175 20.2 Plus
zip-PE 1971 CG15792-PE 899..1352 261..668 175 20.2 Plus
zip-PC 1971 CG15792-PC 899..1352 261..668 175 20.2 Plus
zip-PF 1979 CG15792-PF 907..1360 261..668 175 20.2 Plus
zip-PB 2011 CG15792-PB 939..1392 261..668 175 20.2 Plus
zip-PD 2016 CG15792-PD 944..1397 261..668 175 20.2 Plus
zip-PI 2024 CG15792-PI 952..1405 261..668 175 20.2 Plus
zip-PA 2056 CG15792-PA 984..1437 261..668 175 20.2 Plus
sti-PA 1854 CG10522-PA 429..1194 18..769 174 19 Plus
sti-PB 1858 CG10522-PB 433..1198 18..769 174 19 Plus
Root-PF 2048 CG6129-PF 507..1106 48..691 174 19.4 Plus
Golgin245-PA 1489 CG3493-PA 147..617 261..728 171 19.9 Plus
brp-PH 1740 CG42344-PH 366..995 39..669 171 19.8 Plus
brp-PE 1740 CG42344-PE 366..995 39..669 171 19.8 Plus
brp-PD 1740 CG42344-PD 366..995 39..669 171 19.8 Plus
brp-PG 1786 CG42344-PG 412..1041 39..669 171 19.8 Plus
brp-PL 1781 CG42344-PL 879..1718 19..771 166 19.1 Plus
brp-PH 1740 CG42344-PH 838..1677 19..771 166 19.1 Plus
brp-PE 1740 CG42344-PE 838..1677 19..771 166 19.1 Plus
brp-PD 1740 CG42344-PD 838..1677 19..771 166 19.1 Plus
brp-PG 1786 CG42344-PG 884..1723 19..771 166 19.1 Plus
Golgin245-PA 1489 CG3493-PA 804..1488 21..669 165 19.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 07:07:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11283-PA 1192 GI11283-PA 1..1192 1..1201 5704 91.7 Plus
Dmoj\GI18988-PA 901 GI18988-PA 473..709 941..1185 558 44.5 Plus
Dmoj\GI13930-PA 700 GI13930-PA 376..619 942..1185 295 31.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 07:07:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25785-PA 1197 GL25785-PA 1..1197 1..1201 5808 94.4 Plus
Dper\GL16929-PA 498 GL16929-PA 217..453 941..1185 538 44.1 Plus
Dper\GL22115-PA 681 GL22115-PA 358..601 942..1185 298 31.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 07:07:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10833-PA 1197 GA10833-PA 1..1197 1..1201 5805 94.3 Plus
Dpse\GA10840-PA 1139 GA10840-PA 695..931 941..1185 549 44.1 Plus
Dpse\GA10840-PB 1008 GA10840-PB 564..800 941..1185 546 44.1 Plus
Dpse\GA10537-PA 681 GA10537-PA 358..601 942..1185 298 31.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 07:07:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16210-PA 1201 GM16210-PA 1..1201 1..1201 6358 99.3 Plus
Dsec\GM15644-PA 1015 GM15644-PA 579..815 941..1185 555 44.5 Plus
Dsec\GM25428-PA 679 GM25428-PA 341..599 924..1185 300 31.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 07:07:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23428-PA 1201 GD23428-PA 1..1201 1..1201 6365 99.6 Plus
Dsim\GD25133-PA 1015 GD25133-PA 579..815 941..1185 555 44.5 Plus
Dsim\GD14457-PA 679 GD14457-PA 341..599 924..1185 299 31.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 07:07:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12463-PA 1194 GJ12463-PA 1..1194 1..1201 5792 92.6 Plus
Dvir\GJ19948-PA 1149 GJ19948-PA 718..954 941..1185 555 44.5 Plus
Dvir\GJ13718-PA 709 GJ13718-PA 386..629 942..1185 292 31.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 07:07:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24804-PA 1209 GK24804-PA 1..1209 1..1201 5847 93.7 Plus
Dwil\GK20827-PA 1194 GK20827-PA 739..975 941..1185 543 43.3 Plus
Dwil\GK17077-PA 686 GK17077-PA 355..604 945..1185 279 30.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 07:07:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14088-PA 1202 GE14088-PA 1..1202 1..1201 6343 99.3 Plus
Dyak\GE11683-PA 1163 GE11683-PA 728..964 941..1185 556 44.5 Plus
Dyak\GE21978-PA 680 GE21978-PA 342..600 924..1185 298 30.9 Plus

LD33094.hyp Sequence

Translation from 167 to 3772

> LD33094.hyp
MWNMMCDVMPTISEDSISQRSSQFSGEDANFEQLMVSMLDERDKLMDSLR
EAQERLNETENKLRDVEKERDSLQRQINANLPQEFATLTKELTQARETLL
ERDEEIGELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAAAQSGVS
SEVEVLKALKSLFEHHKALDEKVRERLRLSIEKNNMMEEELSSAKEELAQ
YKAGVVPAGVGSGSGAGSAATTAGGGGAENGLKEKMAGVGGSGGVNGEAN
ELNDYAAKTHELQTIIEKQTSELSQWQRRVSDLNNKISELEENMSRVQKE
HCKAQDQCAKLQRDLRENVAQKEDQEERITTLEKRYLNAQRESTSLHDLN
EKLEQELRHKEAQLKLHEEKIGAIEEKLELSEQKLAQHAKLQPDMEEQLK
ARMEALTKAQERHGSAEDRIRGLETNLDEKTNEVVRLNQRLKMNEEHNLR
LSSTVDKLLSESNERLQVHLKERMHALDEKNALTQELEKARKVAEELHHE
KSEIMKELSKTRLEIENFKRQLLQQEIAYNIQQTEALTRSLSPSSVVDPS
GAFSRSNSHASFETHSLRRQSKQRLSEENALVRSMAEQEWEKLQQAAHAQ
QQAYELASAADCDDSDVLYAAATDMMSPSGHTDAQTLAMMLQEQLDAINN
EIRLIQEEKQSTEARAEELESRVGSLEHVNLLARGRSMDRQSPPMSGRST
PNSPQRDFMQKYHTLNLPVLSSDASREELHGGMSTTGDSSSGGAASPLTA
RSMRLERVAQALAHSQEELRRRSIGLNPNASVAPNHTGGHMPLSSHSYGL
SPLSSRYGSQESLRHYNTMGSMSMLQTPTSGVSREAAAAAVQKKKGIKSS
LGRFFSKKEKVKGVKDTLPDGSPSMMSIGNLSIGLSEVDSNYDAMSMTGG
MMPRIASSQGSKISSVDYGRQKKEHDYRNDLLGEAMKAGTPFALWNGPTI
VAWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLK
LRLAIQEMVSLTSPSAPQTSRTTLAFGDMNHEWIGNYWLPGLGLPQYRTT
FMECLVDARMLDHLTKKDLRGQLKMVDSFHRTSLQYGISMLKRLNYDRTE
LEHRRKMSENGLCDVLVWSNERVIRWVGSIGLKEYANNLLESGVHGGLMA
LDEGFDANAMGLALQIPTQNAQARQILDTEFNNLLQIATDRRPENEQRSA
S*

LD33094.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:56:33
Subject Length Description Subject Range Query Range Score Percent Strand
Liprin-alpha-PE 1214 CG11199-PE 1..1201 1..1201 6060 100 Plus
Liprin-alpha-PA 1201 CG11199-PA 1..1201 1..1201 6060 100 Plus
Liprin-alpha-PB 1201 CG11199-PB 1..1201 1..1201 6060 100 Plus
Liprin-alpha-PD 1205 CG11199-PD 1..1205 1..1201 6045 99.7 Plus
Liprin-alpha-PC 1158 CG11199-PC 1..1158 1..1201 5490 92 Plus