BDGP Sequence Production Resources |
Search the DGRC for LD33103
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 331 |
Well: | 3 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6659-RA |
Protein status: | LD33103.pep: gold |
Preliminary Size: | 3218 |
Sequenced Size: | 3344 |
Gene | Date | Evidence |
---|---|---|
CG6659 | 2001-01-01 | Release 2 assignment |
CG6659 | 2002-06-12 | Blastp of sequenced clone |
CG6659 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6659 | 2008-04-29 | Release 5.5 accounting |
CG6659 | 2008-08-15 | Release 5.9 accounting |
CG6659 | 2008-12-18 | 5.12 accounting |
3344 bp (3344 high quality bases) assembled on 2002-06-12
GenBank Submission: AY122173
> LD33103.complete ATTGCTGGCTGGTTTTTATTGTGCGGAGCCAGGAATAATCGTTGTGAAAT AAATAATGATTGCCAATTTGAACACAGCCACCCAGTGAGACGACACCCAC AATCGCAGCACGATGCGCGAGCCCAACCTGTACGTGATCCTGTCGCACGC GCTGATCGGCTGCGGCTTCTTCTTCCTATACGTGCAGCATGTGCGCGTGA TCTTCGAGACGCGCACCAACATCCAGCAGCTCAATCAGCTGGAGCGGGAG GCGCTTCTGCGGCGCGAGGATGCCCTGTACTATGCCTTCTACAAGCAGCT GGCCGAAGGGCCGGACTTTTGGCACGGCTACGAGCAGCTGAAGAACGTCA CGGACATCGAGTATCCGCACAGTGTCAATGTGCTGCAGCGATTCTACGTG CTGCCGGAGCTGGTCACGGCGTACTTCTTTCACGTAGTGCGCTCCGGCTT CAATCCAATGGTGCAACCGATGCAGTTCTATCTGGAGTTCGTGTGGCTGA TGGGCGGGGTAACCCTGCTGGTACTCTACCTGTACGGAACGCTGCTCAGC GAGAACATTTTCGGTGGCATATACGGCGTAATCTCGTACCTGATGTTCCA CAGCTTCGTGGCCAAGATCTATGAGCGGCCGCTGGCGCGGGAGAACTTCG CCTTTCCGTTCATTTTCCTGCAGATGTTTTATCTGTGTATCTGCATCGGA AGGATCATACACCGACAGCGGCACACATCTCGCATGTTCATGATCTTCGC CATGTCGCTTTTCACCGCCTGCGCCCTACTCTCCTGGCAGTTCTCCACCT TCATCTTCACCACCCAGATCCTGATCATGATGACGTCCTGGAACGCGAGC GCGCTGCCCACGGCTCTGGTCAACGCCTTCGTGCTGGACTACTCGCTGTC GCACCTGCTGGGCCACGCTCTCGCCTTTGTAATGTCGCACGGCAACAGCC AGCTGCTTCTCACCTGGCAGCTGAGCATCTCGCTGTTCCTATTTTTGATT ACAATGGTGCGACAGTTGCGTCACGTGCGCAGCCGGCGACTGGGACACGC GCAGGATCTGCTGAACGGCGACTTATTCTCGTTGAAGTTCCTCATGCTCA CACTGCTGCTCGCCAGCAGCGTGCAGACCACGCTGATAGAGCTCTTCAAT CGGGCTGGCGTGGTCAGTGTGACGGAAGGCGACCAGCAGCACTTCTTCGA CATATGTGCCCACTGGGCTCTGCAGGTCAATGTCGGCTTTGTCGCCCACC TTTCCGCCTGCAATCCGCAGTACGCGCGCGTCGCCTGGTCAGAATTGTGG CAGCTGGTCAAGACGATGATTGTTAAGCCGTACTGCATGTACGGCGTGGT CATGCTGGCCATGTTCTTCCGGCGCTGGCGCAAGAGCGGCGCCCCAGTAA GTGCCCTCACCGAAGAGCAGCGCGAGAGAGCGCGCAAATACGTGCTGGAA GACTTCATAGAGGAGCACTTCGTTTCCATGAGCGACATGTCTAGCAAGGA GACGGAGAAACAGCTGTATAAGTGCTTCCGCCTGCTCAAAAGCTGCGACT ACGACTACGAGCGCTACAAGCGCGCACAGGCCAGCCTGCGTAAGGAGCAG CCGCCCGCCCGCGACGACTTTATGCAGGATATCAAGCGGCTGCGAGCGCA AATTAACCGCAACAGCGTCAAGCAGCGCAAGGAGCGGGCGCAGGAAACCA AAGAAGCGGCCACCGACGGGGCCAGCACGCCGACTGAGGAGGAGGATAAG GATCCGGAAGCAGAATCGGAATCGAAGAAGAAGAATCAGGAGCCAGGTAG TGGCGAAACGGAGACCGAGTCTGCAGCAGATCCCACTGAAACGCCGCCGT CCAGGTCCGCGGACAATGAAGAGGAGGAGGAGGAACACTCTGCCACCGCC GCCGGCTGCGGCTCAAACTCGAGTGGCCATCGACAGAGGAAGCGCAGCTC CTCCAGACGCAGCTCCGTGGTGCCCACGGCCAACGCACAGATCCTCAACA TGCACTACGTGTACAGCTTCCTGCAGATGCTAGTCTTCACCCTTATCGGA CTCGCCGTGCGCAAGCTCTTCTTCCTCAGCTTCACGCAGGGCTGCGTCAT CGCACCCACCGTCTGCTCCAAACTGTGGTACCATCGCCAGCGCAACATCT TCTGGTCGGTCTCGCTGGCCGTCTTCCTGCTCAGCATGTTCGATCCGGGC ATGGTGAACATTCGCGAAGAGTACTTCCCCACGCGCTACTCCAAGAGCGG TGACGACCTGGACAGCATGCTCGAGTGGATCAAGCTGAACACAGAGCGAG ATGCGGTCTTTGCCGGCCCCGTGGACATCATCGGCACCGTGCACTTGACC ACCAAACGGCCCATAGTCAACCATGCGCACCTGGAGATGCGTCAGATAGC GGAGCGCACGGAGCACGTGTACTCGGTGTACAGTCGTCAGCAGTCGTCGG ATATCTACAACCAGTGCGCCCAGCTGAAGATCCAGTACTTGATCATATCG CTGGACGAGTGCACCAACGAAGTGCGCGACGATTGCGATCTGCTGGCCAT TTGGGATGACAAGCAGCCGGCCTACCAAAAATACCCACAGTTCTGCCACG AGCTGCTCCACAAGAACGTGCCCAGCTTCCTGAAAGTGTTCGCCAACGAC CACTACGGCATTATCAAGATGTTCTCGCAGAGCGTCCAGATCAACCTCAA GCACAACAAGATGCCCGAGATGTCCATATAGGGCTGGCCGTCCACGGAGG CGGCGCGATGATGGAATGCTGGAATCGTGTTGTGTTGTACGTAGCTGTGT GAGCTGTGTGACTAGGATTTAGCATTTTACGATGTGTGTGTATTATGATT ACGTTTAGTATTGCCCCAACCTCGGATGCCCGAACACATCTCGCACCCAA TCCCAAATCCCGATCCCGCGTAGTAGCTGATTTGATATGGCAGATTGGCG ATTAGAAGGAGGCCCCTTCCGCTAGATAGTAAACTGGATGCATTTAGCAG CTTGACTTGTTTCCGCGCCGCTGCGTTCAAACCTTGTTTGGATCATTCCC CGCACCCGCACCTGCGCCTGCGCCCTCGCATTCGAATAAGTTAATCTAGC CGAACGGAGCGACCTTAACTCTAAATACTTTCGTTAAGTTTAAGCTAAGC TTTTTACATTTACGCATGTAGTATACATATGACGATGAGACGCGTGTGGC AACGAAAGTGGCTGCATGTGGACGATGTGCATCCGGGAGCCACGATCCCA GACCCAAAAACAAGCGGGTAAACACGCATTTGCCAGGCAATAAGTGAAAT AAAATGATATATTTGAAACAATCCTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6659-RA | 3485 | CG6659-RA | 152..3477 | 1..3326 | 16630 | 100 | Plus |
CG6659.a | 3299 | CG6659.a | 52..3299 | 78..3325 | 16240 | 100 | Plus |
CG6659-RB | 3481 | CG6659-RB | 314..3481 | 158..3325 | 15840 | 100 | Plus |
CG6659-RB | 3481 | CG6659-RB | 35..193 | 1..159 | 795 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 18543974..18545438 | 2206..742 | 7310 | 99.9 | Minus |
chrX | 22417052 | chrX | 18542559..18543358 | 3325..2526 | 4000 | 100 | Minus |
chrX | 22417052 | chrX | 18545491..18545812 | 742..421 | 1610 | 100 | Minus |
chrX | 22417052 | chrX | 18545878..18546143 | 423..158 | 1330 | 100 | Minus |
chrX | 22417052 | chrX | 18543713..18543908 | 2401..2206 | 980 | 100 | Minus |
chrX | 22417052 | chrX | 18546264..18546422 | 159..1 | 795 | 100 | Minus |
chrX | 22417052 | chrX | 18543463..18543588 | 2526..2401 | 630 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 18654807..18656271 | 2206..742 | 7325 | 100 | Minus |
X | 23542271 | X | 18653391..18654191 | 3326..2526 | 4005 | 100 | Minus |
X | 23542271 | X | 18656324..18656645 | 742..421 | 1610 | 100 | Minus |
X | 23542271 | X | 18656711..18656976 | 423..158 | 1330 | 100 | Minus |
X | 23542271 | X | 18654546..18654741 | 2401..2206 | 980 | 100 | Minus |
X | 23542271 | X | 18657097..18657255 | 159..1 | 795 | 100 | Minus |
X | 23542271 | X | 18654296..18654421 | 2526..2401 | 630 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 18662905..18664369 | 2206..742 | 7325 | 100 | Minus |
X | 23527363 | X | 18661489..18662289 | 3326..2526 | 4005 | 100 | Minus |
X | 23527363 | X | 18664422..18664743 | 742..421 | 1610 | 100 | Minus |
X | 23527363 | X | 18664809..18665074 | 423..158 | 1330 | 100 | Minus |
X | 23527363 | X | 18662644..18662839 | 2401..2206 | 980 | 100 | Minus |
X | 23527363 | X | 18665195..18665353 | 159..1 | 795 | 100 | Minus |
X | 23527363 | X | 18662394..18662519 | 2526..2401 | 630 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 18542559..18543357 | 2527..3325 | 100 | <- | Minus |
chrX | 18543463..18543588 | 2401..2526 | 100 | <- | Minus |
chrX | 18543714..18543907 | 2207..2400 | 100 | <- | Minus |
chrX | 18543974..18545437 | 743..2206 | 99 | <- | Minus |
chrX | 18545491..18545812 | 421..742 | 100 | <- | Minus |
chrX | 18545881..18546142 | 159..420 | 100 | <- | Minus |
chrX | 18546265..18546422 | 1..158 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6659-RA | 1..2619 | 113..2731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6659-RA | 1..2619 | 113..2731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6659-RA | 1..2619 | 113..2731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6659-RA | 1..2619 | 113..2731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6659-RA | 1..2619 | 113..2731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6659-RA | 32..3356 | 1..3325 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6659-RA | 32..3356 | 1..3325 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6659-RA | 32..3356 | 1..3325 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6659-RA | 32..3356 | 1..3325 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6659-RA | 32..3356 | 1..3325 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18653392..18654190 | 2527..3325 | 100 | <- | Minus |
X | 18654296..18654421 | 2401..2526 | 100 | <- | Minus |
X | 18654547..18654740 | 2207..2400 | 100 | <- | Minus |
X | 18654807..18656270 | 743..2206 | 100 | <- | Minus |
X | 18656324..18656645 | 421..742 | 100 | <- | Minus |
X | 18656714..18656975 | 159..420 | 100 | <- | Minus |
X | 18657098..18657255 | 1..158 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18653392..18654190 | 2527..3325 | 100 | <- | Minus |
X | 18654296..18654421 | 2401..2526 | 100 | <- | Minus |
X | 18654547..18654740 | 2207..2400 | 100 | <- | Minus |
X | 18654807..18656270 | 743..2206 | 100 | <- | Minus |
X | 18656324..18656645 | 421..742 | 100 | <- | Minus |
X | 18656714..18656975 | 159..420 | 100 | <- | Minus |
X | 18657098..18657255 | 1..158 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18653392..18654190 | 2527..3325 | 100 | <- | Minus |
X | 18654296..18654421 | 2401..2526 | 100 | <- | Minus |
X | 18654547..18654740 | 2207..2400 | 100 | <- | Minus |
X | 18654807..18656270 | 743..2206 | 100 | <- | Minus |
X | 18656324..18656645 | 421..742 | 100 | <- | Minus |
X | 18656714..18656975 | 159..420 | 100 | <- | Minus |
X | 18657098..18657255 | 1..158 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 18551131..18551288 | 1..158 | 100 | Minus | |
arm_X | 18550747..18551008 | 159..420 | 100 | <- | Minus |
arm_X | 18547425..18548223 | 2527..3325 | 100 | <- | Minus |
arm_X | 18548329..18548454 | 2401..2526 | 100 | <- | Minus |
arm_X | 18548580..18548773 | 2207..2400 | 100 | <- | Minus |
arm_X | 18548840..18550303 | 743..2206 | 100 | <- | Minus |
arm_X | 18550357..18550678 | 421..742 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18661490..18662288 | 2527..3325 | 100 | <- | Minus |
X | 18662394..18662519 | 2401..2526 | 100 | <- | Minus |
X | 18662645..18662838 | 2207..2400 | 100 | <- | Minus |
X | 18662905..18664368 | 743..2206 | 100 | <- | Minus |
X | 18664422..18664743 | 421..742 | 100 | <- | Minus |
X | 18664812..18665073 | 159..420 | 100 | <- | Minus |
X | 18665196..18665353 | 1..158 | 100 | Minus |
Translation from 112 to 2730
> LD33103.pep MREPNLYVILSHALIGCGFFFLYVQHVRVIFETRTNIQQLNQLEREALLR REDALYYAFYKQLAEGPDFWHGYEQLKNVTDIEYPHSVNVLQRFYVLPEL VTAYFFHVVRSGFNPMVQPMQFYLEFVWLMGGVTLLVLYLYGTLLSENIF GGIYGVISYLMFHSFVAKIYERPLARENFAFPFIFLQMFYLCICIGRIIH RQRHTSRMFMIFAMSLFTACALLSWQFSTFIFTTQILIMMTSWNASALPT ALVNAFVLDYSLSHLLGHALAFVMSHGNSQLLLTWQLSISLFLFLITMVR QLRHVRSRRLGHAQDLLNGDLFSLKFLMLTLLLASSVQTTLIELFNRAGV VSVTEGDQQHFFDICAHWALQVNVGFVAHLSACNPQYARVAWSELWQLVK TMIVKPYCMYGVVMLAMFFRRWRKSGAPVSALTEEQRERARKYVLEDFIE EHFVSMSDMSSKETEKQLYKCFRLLKSCDYDYERYKRAQASLRKEQPPAR DDFMQDIKRLRAQINRNSVKQRKERAQETKEAATDGASTPTEEEDKDPEA ESESKKKNQEPGSGETETESAADPTETPPSRSADNEEEEEEHSATAAGCG SNSSGHRQRKRSSSRRSSVVPTANAQILNMHYVYSFLQMLVFTLIGLAVR KLFFLSFTQGCVIAPTVCSKLWYHRQRNIFWSVSLAVFLLSMFDPGMVNI REEYFPTRYSKSGDDLDSMLEWIKLNTERDAVFAGPVDIIGTVHLTTKRP IVNHAHLEMRQIAERTEHVYSVYSRQQSSDIYNQCAQLKIQYLIISLDEC TNEVRDDCDLLAIWDDKQPAYQKYPQFCHELLHKNVPSFLKVFANDHYGI IKMFSQSVQINLKHNKMPEMSI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22401-PA | 860 | GF22401-PA | 1..860 | 1..872 | 3657 | 79.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18103-PA | 864 | GG18103-PA | 1..864 | 1..872 | 4108 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12203-PA | 853 | GH12203-PA | 1..853 | 1..872 | 3520 | 73.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6659-PA | 872 | CG6659-PA | 1..872 | 1..872 | 4555 | 100 | Plus |
CG6659-PB | 757 | CG6659-PB | 1..757 | 116..872 | 3942 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10934-PA | 854 | GI10934-PA | 1..854 | 1..872 | 3333 | 69.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27017-PA | 873 | GL27017-PA | 1..873 | 1..872 | 3485 | 73 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22346-PA | 875 | GA22346-PA | 1..875 | 1..872 | 3490 | 72.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22793-PA | 874 | GM22793-PA | 1..874 | 1..872 | 4334 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24471-PA | 216 | GD24471-PA | 54..216 | 699..872 | 863 | 91.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18594-PA | 844 | GJ18594-PA | 1..844 | 1..872 | 3581 | 74.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10186-PA | 883 | GK10186-PA | 1..883 | 1..872 | 3424 | 71.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15504-PA | 869 | GE15504-PA | 1..869 | 1..872 | 4185 | 91.1 | Plus |
Translation from 112 to 2730
> LD33103.hyp MREPNLYVILSHALIGCGFFFLYVQHVRVIFETRTNIQQLNQLEREALLR REDALYYAFYKQLAEGPDFWHGYEQLKNVTDIEYPHSVNVLQRFYVLPEL VTAYFFHVVRSGFNPMVQPMQFYLEFVWLMGGVTLLVLYLYGTLLSENIF GGIYGVISYLMFHSFVAKIYERPLARENFAFPFIFLQMFYLCICIGRIIH RQRHTSRMFMIFAMSLFTACALLSWQFSTFIFTTQILIMMTSWNASALPT ALVNAFVLDYSLSHLLGHALAFVMSHGNSQLLLTWQLSISLFLFLITMVR QLRHVRSRRLGHAQDLLNGDLFSLKFLMLTLLLASSVQTTLIELFNRAGV VSVTEGDQQHFFDICAHWALQVNVGFVAHLSACNPQYARVAWSELWQLVK TMIVKPYCMYGVVMLAMFFRRWRKSGAPVSALTEEQRERARKYVLEDFIE EHFVSMSDMSSKETEKQLYKCFRLLKSCDYDYERYKRAQASLRKEQPPAR DDFMQDIKRLRAQINRNSVKQRKERAQETKEAATDGASTPTEEEDKDPEA ESESKKKNQEPGSGETETESAADPTETPPSRSADNEEEEEEHSATAAGCG SNSSGHRQRKRSSSRRSSVVPTANAQILNMHYVYSFLQMLVFTLIGLAVR KLFFLSFTQGCVIAPTVCSKLWYHRQRNIFWSVSLAVFLLSMFDPGMVNI REEYFPTRYSKSGDDLDSMLEWIKLNTERDAVFAGPVDIIGTVHLTTKRP IVNHAHLEMRQIAERTEHVYSVYSRQQSSDIYNQCAQLKIQYLIISLDEC TNEVRDDCDLLAIWDDKQPAYQKYPQFCHELLHKNVPSFLKVFANDHYGI IKMFSQSVQINLKHNKMPEMSI*