BDGP Sequence Production Resources |
Search the DGRC for LD33138
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 331 |
Well: | 38 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8004-RA |
Protein status: | LD33138.pep: gold |
Preliminary Size: | 1383 |
Sequenced Size: | 1240 |
Gene | Date | Evidence |
---|---|---|
CG8004 | 2001-01-01 | Release 2 assignment |
CG8004 | 2002-06-06 | Blastp of sequenced clone |
CG8004 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8004 | 2008-04-29 | Release 5.5 accounting |
CG8004 | 2008-08-15 | Release 5.9 accounting |
CG8004 | 2008-12-18 | 5.12 accounting |
1240 bp (1240 high quality bases) assembled on 2002-06-06
GenBank Submission: AY119608
> LD33138.complete CGATTTCGGTGTGCAAGTTGAAAAACACAATTTACTCCGTTAATTTACAA TGACATCCCAGTACCTGAGCCAGCTAATAACGGCCGACAAATTGTCCGCC GAGCCCTGGCCCGAAGACGCCACCCTCTACCAGCCGTATGAAGCGGAACA GATCCTACTGCCGGAAAACGCCAGTTGCCTTGCTGTGAAGGCTTACCTGA AGATGTGCAACCTCCCCTTTTTGATTCGGTCCTGTGCCAACGCGGAGCAC ATGTCGCCGGGCGGCAGGATGACCAAGTTGCCCTTCATCCGCGCAGGAGC ATTCATCTTTGCCGAATTCGAGCCGATCGTGAACTTTGTGGAGCAGAAGG AACTGGCCATTGGCAGCTGGCAGGACGAGGACGAGAAGGCCGACATGCGC ACCTATGTGTCGCTGGTGGAGAACATCTTCACCATGGCTGAGCTGTACAT TAGCTTCAAGAACGAACGCGTCTACAAAGAGGTCACAGCGCCCAGGAACG GAGTCGTTTTTCCCTGGCCCCTCAATCACATGCAGAACTATGGAAAGCGG CGGAACGCGCTGCGTCTGTTGAAGGTCTATCAGTGGGACGACCTGGACAT CGATAGCGTCATTGACAAGGTGGCCAAGTGCTGTGAGACGCTCGAATACA AGCTGAAAGAGTCGCCGGAAACGCCATTCTTCTACGGCGATCAGCCCTGC GAACTGGACGCCATCGCCTTCGGCCACCTCTTCAGCATTCTGACCACCAC GCTGCCGAACATGGCGCTGGCCCAAACGGTGCAGAAGTTCCAGCACTTGG TCGAGTTCTGTCGCTTCGTCGATGAGAAGTACTTTCAGACGAGGTGCCTA CCAAATTAGTTATACGTAGTCGTTGCCTTAAATGCTTATCAATTAAGTTG CTCTTGTCCTTTCTTTTTAACCGCTTATATATGCAATTCTAAATGCCCTT AAAACAAATCGTCGCCGTAAGTCACAATTATTTTGCTACTAGCATTTAAA AAAAAAAGTTGTTCTAGTGATTTTGCTGCCATTAATGTCCAAAAATCCAT GTGAATATCATTTGCACAAGTGACTCAATCTGCAAGTTTGTTTAAATGGA ATTCTAAAATACTTCTAACGATCTTTACTTCATTTATTTTGCAGCAAATA ACTTTTCTGCTAATAAAATTGTGTAAGTATTTGCTATAATACATCAAATA AATTGTTTTCTTAGCAAACCAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
aurora-element | 4263 | aurora-element DMAURA 4263bp Derived from AB022762 (d1268008) (Rel. 59, Last updated, Version 1). | 4114..4186 | 92..19 | 124 | 64.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 19916524..19917610 | 134..1220 | 100 | <- | Minus |
chr3L | 19917684..19917816 | 1..133 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8004-RA | 1..810 | 50..859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8004-RA | 1..810 | 50..859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8004-RA | 1..810 | 50..859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8004-RA | 1..810 | 50..859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8004-RA | 1..810 | 50..859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8004-RA | 1..1220 | 1..1220 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8004-RA | 1..1220 | 1..1220 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8004-RA | 23..1242 | 1..1220 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8004-RA | 1..1220 | 1..1220 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8004-RA | 23..1242 | 1..1220 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19927194..19928280 | 134..1220 | 100 | <- | Minus |
3L | 19928354..19928486 | 1..133 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19927194..19928280 | 134..1220 | 100 | <- | Minus |
3L | 19928354..19928486 | 1..133 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19927194..19928280 | 134..1220 | 100 | <- | Minus |
3L | 19928354..19928486 | 1..133 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 19920294..19921380 | 134..1220 | 100 | <- | Minus |
arm_3L | 19921454..19921586 | 1..133 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19920294..19921380 | 134..1220 | 100 | <- | Minus |
3L | 19921454..19921586 | 1..133 | 100 | Minus |
Translation from 49 to 858
> LD33138.hyp MTSQYLSQLITADKLSAEPWPEDATLYQPYEAEQILLPENASCLAVKAYL KMCNLPFLIRSCANAEHMSPGGRMTKLPFIRAGAFIFAEFEPIVNFVEQK ELAIGSWQDEDEKADMRTYVSLVENIFTMAELYISFKNERVYKEVTAPRN GVVFPWPLNHMQNYGKRRNALRLLKVYQWDDLDIDSVIDKVAKCCETLEY KLKESPETPFFYGDQPCELDAIAFGHLFSILTTTLPNMALAQTVQKFQHL VEFCRFVDEKYFQTRCLPN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8004-PA | 269 | CG8004-PA | 1..269 | 1..269 | 1429 | 100 | Plus |
CG5662-PB | 292 | CG5662-PB | 11..275 | 6..267 | 622 | 46.8 | Plus |
CG5662-PA | 292 | CG5662-PA | 11..275 | 6..267 | 622 | 46.8 | Plus |
Translation from 49 to 858
> LD33138.pep MTSQYLSQLITADKLSAEPWPEDATLYQPYEAEQILLPENASCLAVKAYL KMCNLPFLIRSCANAEHMSPGGRMTKLPFIRAGAFIFAEFEPIVNFVEQK ELAIGSWQDEDEKADMRTYVSLVENIFTMAELYISFKNERVYKEVTAPRN GVVFPWPLNHMQNYGKRRNALRLLKVYQWDDLDIDSVIDKVAKCCETLEY KLKESPETPFFYGDQPCELDAIAFGHLFSILTTTLPNMALAQTVQKFQHL VEFCRFVDEKYFQTRCLPN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10837-PA | 269 | GF10837-PA | 1..267 | 1..267 | 1372 | 94.4 | Plus |
Dana\GF21225-PA | 297 | GF21225-PA | 20..271 | 20..267 | 540 | 45.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13360-PA | 269 | GG13360-PA | 1..269 | 1..269 | 1391 | 95.5 | Plus |
Dere\GG17868-PA | 287 | GG17868-PA | 21..275 | 16..267 | 663 | 49 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14498-PA | 270 | GH14498-PA | 3..268 | 2..267 | 1311 | 90.2 | Plus |
Dgri\GH19302-PA | 324 | GH19302-PA | 10..246 | 30..266 | 156 | 24.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8004-PA | 269 | CG8004-PA | 1..269 | 1..269 | 1429 | 100 | Plus |
CG5662-PB | 292 | CG5662-PB | 11..275 | 6..267 | 622 | 46.8 | Plus |
CG5662-PA | 292 | CG5662-PA | 11..275 | 6..267 | 622 | 46.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13657-PA | 270 | GI13657-PA | 3..268 | 2..267 | 1306 | 89.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22904-PA | 268 | GL22904-PA | 1..267 | 1..267 | 1324 | 90.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23333-PA | 268 | GA23333-PA | 1..267 | 1..267 | 1328 | 90.6 | Plus |
Dpse\GA23925-PA | 111 | GA23925-PA | 1..110 | 158..267 | 563 | 90.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15407-PA | 269 | GM15407-PA | 1..269 | 1..269 | 1410 | 97.4 | Plus |
Dsec\GM12065-PA | 235 | GM12065-PA | 11..225 | 6..217 | 532 | 49.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12238-PA | 269 | GD12238-PA | 1..269 | 1..269 | 1413 | 97.8 | Plus |
Dsim\GD17197-PA | 287 | GD17197-PA | 11..275 | 6..267 | 660 | 47.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13992-PA | 270 | GJ13992-PA | 4..268 | 3..267 | 1297 | 89.1 | Plus |
Dvir\GJ15694-PA | 292 | GJ15694-PA | 31..288 | 19..267 | 631 | 46.5 | Plus |