BDGP Sequence Production Resources |
Search the DGRC for LD33348
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 333 |
Well: | 48 |
Vector: | pOT2 |
Associated Gene/Transcript | mbo-RA |
Protein status: | LD33348.pep: gold |
Preliminary Size: | 2957 |
Sequenced Size: | 2564 |
Gene | Date | Evidence |
---|---|---|
CG6819 | 2001-01-01 | Release 2 assignment |
CG6819 | 2001-07-04 | Blastp of sequenced clone |
CG6819 | 2003-01-01 | Sim4 clustering to Release 3 |
mbo | 2008-04-29 | Release 5.5 accounting |
mbo | 2008-08-15 | Release 5.9 accounting |
mbo | 2008-12-18 | 5.12 accounting |
2564 bp (2564 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051827
> LD33348.complete CCGGGCAACGAATTGAAGCATAAACAAACGATGTCGCTCACCGATGTCTT GGAATTGAACAAAACGGAGTTGTTCGCGAAGATTCGCAATGGGTTGCCCG TGGTGCAAAGGACTCAGAACCTGCTGGACTGCAAGGACGATCTGCTCTTT GCCTGGCACGCGAAGGACAGCTGTCTGTTGGTTCGCAACTGGCGCTCATC GCTGGCGGCAAAGGTGAATATCCAGTTCCAGACACTGATTCCATCGAGCT TGGTGAGCCTGGAGGTGGACCGCGTGCTGGCCTCCAACGAGGGCTCCCTC GTGGCACTAAGTGGACCGCGCGGCGTTGTCATAATGGAGCTGCCCCGCCG CTGGGGCCCCGATGGATACTACAAGGATGGCAAGCCAGTGATCACCTGCC GCACGTTCGGCCTGGACACTCAGCTTTTCCTAAAAAACCCGCACTTGGAA GTGCGCCAGGTCCGCTGGCATCCGCACTCCGTGTCAGACTCCACGCTGCT CGTGCTGCTCAACAACAACACGATTCGAGTGTACAATCACTCCAAGTTGC GCCACGTGTGGCAGGTGGGTCCCCCGGTGCTTCGAAGTGGGGCCAATAAC TCGCTATGCGACTTTGGCGAGCTAGCCGTTGACTTTGACATCGCTCCTGC TGCAAAACCACGTGTCACTGAACCAGAAACAGCCGGCAATAACGAAACCA CTTTGGATAAGAGCAACAAAACCCTTGTGGCGGCCAAATCGCTGCCGAAA CAGGAGAGGATAGAGTGGCCCATGGTTGTGCTCCGCGAGAATGGAAACAT CTACATTTTGATGACCGGCGTGGATTCGGAGAATACGCGCCTGCAGGGCC CCGTTACCATAACGCCACAGGCACATGACAATTATGGACTGGAGTCCTGT GCCCTAATGATTATCCCATCACTTCCGCCGACCATTGTTATAGCTGAATC CAATGGAAAGCTTCACCATGCTCTGCTTATGGAGGCGGAGGCCACTGAGC ATTCTTTCAATGAGGTTGACGACTCTGTGTTGATTGAACCCGCCGAATAC GTTGTACATGTACTAGAAACTGTCGAACTTGAGCTGGGAATATCTGCACC CGCAACTGGAAAAGAAGGAGGCAACTGTCCCATATACTTAAAGCGGGATT TGATCAATGAGCTTCGCTACTTTGCCTACCACAACGCAGGACTTCATGCC GTTACGGTCAGCTTTATCGCAGAGCTGCAACGTTACTTGGAAAGCGAGTC CGATGAAGATCGTCTAGAGCTGGCGGTCTCTGCAAGTGCAGAGTACATTC TGTGCACAAAATTCGATTCCAGTGAGACGGTGAACGCAGTCTTTGGACTT GCCCTATTACAAATTCCTGCCGGTATAGTTCTACTGCTGGGCAGCGGTCA GGTGATTAGCCTTAAGCTGGTAATTGATGCCCAGCTGTTGGTTACACCTA ATGAGAATAAGCCAGTTGACTCGGAAGTGTCTCAGCAGGAAAGTGGGCCA CCGTTTGTCGATACGATTAAATCGCTTTTGCAACGTAGTGTTAACCAGCC CATCTTGGCGGATAAACTTTCCTCGCCATCCGCCCAGGAGAGCTTCGAAC TGCTTAACCAGGCAATCGAGGTGCTTCGTGAGCAGTACCTTAAACGACAT GACCTTGTGCGCGCCGCATTTACACGCCACATCAACCAGATCCAGCTGAA GAAGGAACAACAGCTGCAGGAGATCCAAGACCTGGAGCAGGAACGCGAAC TGATCAGCGAGCGGGCCCACAAGCTTGCCGAGCGCTTCGAGGAGATTAGC TACAACCAGGAGCTGCTCGTCCGCAAGTGCAACGCTCTGATGCAGAGGGC CAATGCCTCACTACCCAATAGTGTGATTGCGGAACGGGAGTTTTCGCAGG AGGTGATTCGACTTAATAAGGTCACCCAGAGCCTGGCCGCTGGACTGGAG ACTGCTAAGAAGACGTTTAACAAGCAGCGCTACCACATTGCCCAGAGTCA AGAGGACCTCAAGAAGAACGCGTACGAGCTGCCGGAGAAACAGCACCGCA CTATCACCGAGATACTTACCCAGCTAACCGGGGAGATCGATCGCCAGATC ACCGACGTCAAGCGCATTAATAAAATCGTTGGCATCTAAATTCGGATTGG GAAGCACGCTCTTAAGATTTCACCACGTTTTCGTGATAGTAAAGCCGTTG CGTAGAACTAAAACGTATTTTTAATAAACATGTCAATTAAGTCCTATTTT CGTTAGCTGGCTTCTGTTTTTTGTATTCGATGACACTTTAATGAGCATAC GTCAGCGTTTTCTGCTAGACGATCCTTCATGAAGACACAAAAACATTTGA TACCCATGGGTATTGTGCTACAAAGTCTACTACAGTAAAATCTATTCTTG ACGTACTGTCCCATTTTCCGGATTATAGTTCAAAAAGTAAAATAATAGTA ATAAAATAATAATAAGAATAAAATAATGAATAATAATAGTAGACTTCATA CATCATAATTCGGAAATACAAAGTATTGTAGTACTGCTGTAACATAAAAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mbo-RA | 2559 | mbo-RA | 14..2559 | 1..2546 | 12730 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 8501727..8504268 | 2542..1 | 12650 | 99.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 12676486..12679031 | 2546..1 | 12730 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 12417317..12419862 | 2546..1 | 12730 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 8501724..8504268 | 1..2545 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mbo-RA | 1..2109 | 31..2139 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mbo-RA | 1..2109 | 31..2139 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mbo-RA | 1..2109 | 31..2139 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mbo-RA | 1..2109 | 31..2139 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mbo-RA | 1..2109 | 31..2139 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mbo-RA | 14..2558 | 1..2545 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mbo-RA | 14..2558 | 1..2545 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mbo-RA | 22..2566 | 1..2545 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mbo-RA | 14..2558 | 1..2545 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mbo-RA | 22..2566 | 1..2545 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12676487..12679031 | 1..2545 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12676487..12679031 | 1..2545 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12676487..12679031 | 1..2545 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 8502209..8504753 | 1..2545 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12417318..12419862 | 1..2545 | 100 | Minus |
Translation from 0 to 2138
> LD33348.hyp PGNELKHKQTMSLTDVLELNKTELFAKIRNGLPVVQRTQNLLDCKDDLLF AWHAKDSCLLVRNWRSSLAAKVNIQFQTLIPSSLVSLEVDRVLASNEGSL VALSGPRGVVIMELPRRWGPDGYYKDGKPVITCRTFGLDTQLFLKNPHLE VRQVRWHPHSVSDSTLLVLLNNNTIRVYNHSKLRHVWQVGPPVLRSGANN SLCDFGELAVDFDIAPAAKPRVTEPETAGNNETTLDKSNKTLVAAKSLPK QERIEWPMVVLRENGNIYILMTGVDSENTRLQGPVTITPQAHDNYGLESC ALMIIPSLPPTIVIAESNGKLHHALLMEAEATEHSFNEVDDSVLIEPAEY VVHVLETVELELGISAPATGKEGGNCPIYLKRDLINELRYFAYHNAGLHA VTVSFIAELQRYLESESDEDRLELAVSASAEYILCTKFDSSETVNAVFGL ALLQIPAGIVLLLGSGQVISLKLVIDAQLLVTPNENKPVDSEVSQQESGP PFVDTIKSLLQRSVNQPILADKLSSPSAQESFELLNQAIEVLREQYLKRH DLVRAAFTRHINQIQLKKEQQLQEIQDLEQERELISERAHKLAERFEEIS YNQELLVRKCNALMQRANASLPNSVIAEREFSQEVIRLNKVTQSLAAGLE TAKKTFNKQRYHIAQSQEDLKKNAYELPEKQHRTITEILTQLTGEIDRQI TDVKRINKIVGI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mbo-PA | 702 | CG6819-PA | 1..702 | 11..712 | 3554 | 100 | Plus |
Translation from 30 to 2138
> LD33348.pep MSLTDVLELNKTELFAKIRNGLPVVQRTQNLLDCKDDLLFAWHAKDSCLL VRNWRSSLAAKVNIQFQTLIPSSLVSLEVDRVLASNEGSLVALSGPRGVV IMELPRRWGPDGYYKDGKPVITCRTFGLDTQLFLKNPHLEVRQVRWHPHS VSDSTLLVLLNNNTIRVYNHSKLRHVWQVGPPVLRSGANNSLCDFGELAV DFDIAPAAKPRVTEPETAGNNETTLDKSNKTLVAAKSLPKQERIEWPMVV LRENGNIYILMTGVDSENTRLQGPVTITPQAHDNYGLESCALMIIPSLPP TIVIAESNGKLHHALLMEAEATEHSFNEVDDSVLIEPAEYVVHVLETVEL ELGISAPATGKEGGNCPIYLKRDLINELRYFAYHNAGLHAVTVSFIAELQ RYLESESDEDRLELAVSASAEYILCTKFDSSETVNAVFGLALLQIPAGIV LLLGSGQVISLKLVIDAQLLVTPNENKPVDSEVSQQESGPPFVDTIKSLL QRSVNQPILADKLSSPSAQESFELLNQAIEVLREQYLKRHDLVRAAFTRH INQIQLKKEQQLQEIQDLEQERELISERAHKLAERFEEISYNQELLVRKC NALMQRANASLPNSVIAEREFSQEVIRLNKVTQSLAAGLETAKKTFNKQR YHIAQSQEDLKKNAYELPEKQHRTITEILTQLTGEIDRQITDVKRINKIV GI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17877-PA | 703 | GF17877-PA | 1..702 | 1..701 | 2929 | 77.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17108-PA | 703 | GG17108-PA | 1..703 | 1..702 | 3368 | 90.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19600-PA | 701 | GH19600-PA | 3..701 | 2..702 | 2541 | 68.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mbo-PA | 702 | CG6819-PA | 1..702 | 1..702 | 3554 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22267-PA | 701 | GI22267-PA | 1..701 | 1..702 | 2483 | 65.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27340-PA | 698 | GL27340-PA | 1..698 | 1..702 | 2703 | 73.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19884-PA | 698 | GA19884-PA | 1..698 | 1..702 | 2730 | 74 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25992-PA | 702 | GM25992-PA | 1..702 | 1..702 | 3491 | 92.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20552-PA | 702 | GD20552-PA | 1..702 | 1..702 | 3523 | 93.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24058-PA | 705 | GJ24058-PA | 1..705 | 1..702 | 2563 | 67.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13562-PA | 701 | GK13562-PA | 1..701 | 1..702 | 2534 | 66.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24497-PA | 704 | GE24497-PA | 1..704 | 1..702 | 3496 | 92.9 | Plus |