BDGP Sequence Production Resources |
Search the DGRC for LD33682
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 336 |
Well: | 82 |
Vector: | pOT2 |
Associated Gene/Transcript | Ate1-RB |
Protein status: | LD33682.pep: gold |
Sequenced Size: | 1610 |
Gene | Date | Evidence |
---|---|---|
CG9204 | 2002-11-13 | Blastp of sequenced clone |
Ate1 | 2008-04-29 | Release 5.5 accounting |
Ate1 | 2008-08-15 | Release 5.9 accounting |
Ate1 | 2008-12-18 | 5.12 accounting |
1610 bp assembled on 2006-11-09
GenBank Submission: BT001498
> LD33682.complete CGGCTTGCAGCTTTAATATTTTAGTCGTAATTAAATGCAATATGTTTGTA CTATAAACGCCGTCGGAAGAGCTTAATAATGAGCTTGAGCATTGTGAGTT ACTATGGCAGCCAGCAGAGCAAGTGCGGCTACTGCGCGGGAGCGAACTGC AGCCTGTCGCACGGTATGCACGCGTATCAGCTGGACTGCCGGGACTATCA GGACCTCATCGATCGCGGCTGGCGGCGGTGCGGCTACTACTGCTACAAGC TGCGCAACCAGGAGACCTGCTGCCCCTGCTACACAATCAAATGTAATGGC CTGGAGTTCAAGCTCTCCAAGTCGAACAAGCGCATACTTCGCCGCATAAA TCGATTTTTGCGCGACGGCAAGCGAGAGTCCAAACCGGAAGCCGGCGACG GTGACGGGGAAGCCGATGCCGATTACGCCATAGTGGCTCCCGAGGTCACG GCCAGCGAACCGCAACCCCAGCTGCCAGATAAGAGTCCCCCTGTTATCAA TGTCGAGCAAGTTGCATCACTGGCAACGGCTCAGAGGAAGCCGACGAAGC AGGCAACTGCTGCCGCGGTGGAAGCTCCTACGTTGGGGTCCAACAAATCA TCACTCTTATCTTCATCAGCCGCAGCACCGATCTCAAACAAGCCGTGCAA GAAGGCCAAGCAGATGCGATTGGATCGACGGCTGGCCAAGCTGGGAGACT CGGCCTCCTACTCAACGAAATCCCTTACCCAGGAAAAGACACTTCGCGAC TTCTTGAACACGGACAGCGAGACAAACAAACATCGGCTAAAGCTGCGCTT AATTCACGTCTACGACGACGAGTTCCGGCGGACCCTGCCCCAGAGTTTTG CGCTCTATAAGAAGTATCAGATATCGATACATAATGATCCGCCAAAGGAT CAGGACGCGTACAAGGAGCATCTGCAGGCGACTCCCCTACAGAATGAGAA ACCCTGGGATGGTCCCGAAATGGGCTACGGTTCGTTTCATCAGCAGTACT GGCTGGACGACAAGTTGATTGCCGTCGGCGTGATTGACATTCTGCCGGGT TGTGTAAGCTCGGTGTACTTTTTCTACGATCCGGACTATAGCTTTTTATC GCTTGGCACATATGGTTCACTCAGGGAAATTGAATTGGTGCAGTCGCTCG CCGAGAAGGTGCCTTCTCTCAAGTATTACTATATGGGTTTCTACATACAC TCCTGTCCCAAAATGCGCTACAAGGGCAAGTTGTCCCCCTCTTACTTGCT GTGCCCGGAGACCTATGAATGGCTACCGCTCACCGATGTTATTCGTGCTA AGCTAGACGAACATAAATACCAGCGCTTAAACGAAGATCCTGCAGCTAGG GATGTGAATGAGTTTTTGATGGAGCATTTGGACGAAGTTAAGCTGCTCTT GGGTGGAAGAACCCGCACAGACTACAAGCACTTTAGGCAGCTGCGTGGGA CCGTCTCCGATGACGATATCATTATTGAGTACAGCAAGCTCGTGGGAAAA GAGTGTGCTCGGCGCATGCTATACGTGAAGTAAAGTTGCCATTATTTGAA TTTTGAATTAAATGCCGTTCGCAATAGCAATATGTTGAAAATAAAAAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ate1-RB | 1696 | Ate1-RB | 45..1642 | 1..1598 | 7975 | 99.9 | Plus |
Ate1-RA | 1719 | Ate1-RA | 643..1621 | 620..1598 | 4880 | 99.8 | Plus |
Ate1-RC | 2860 | Ate1-RC | 967..1624 | 941..1598 | 3275 | 99.8 | Plus |
Ate1-RA | 1719 | Ate1-RA | 45..643 | 1..599 | 2995 | 100 | Plus |
Ate1-RC | 2860 | Ate1-RC | 45..643 | 1..599 | 2995 | 100 | Plus |
Ate1-RC | 2860 | Ate1-RC | 643..815 | 620..792 | 865 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 16143730..16144165 | 598..163 | 2090 | 98.6 | Minus |
chr2R | 21145070 | chr2R | 16143471..16143669 | 797..599 | 950 | 98.5 | Minus |
chr2R | 21145070 | chr2R | 16142663..16142852 | 1129..940 | 920 | 98.9 | Minus |
chr2R | 21145070 | chr2R | 16142448..16142614 | 1288..1122 | 835 | 100 | Minus |
chr2R | 21145070 | chr2R | 16144235..16144400 | 166..1 | 815 | 99.4 | Minus |
chr2R | 21145070 | chr2R | 16142027..16142181 | 1592..1438 | 775 | 100 | Minus |
chr2R | 21145070 | chr2R | 16142926..16143077 | 942..791 | 760 | 100 | Minus |
chr2R | 21145070 | chr2R | 16142237..16142389 | 1440..1288 | 750 | 99.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 20256690..20257125 | 598..163 | 2180 | 100 | Minus |
2R | 25286936 | 2R | 20256431..20256629 | 797..599 | 980 | 99.5 | Minus |
2R | 25286936 | 2R | 20255623..20255812 | 1129..940 | 935 | 99.5 | Minus |
2R | 25286936 | 2R | 20255408..20255574 | 1288..1122 | 835 | 100 | Minus |
2R | 25286936 | 2R | 20257196..20257360 | 165..1 | 825 | 100 | Minus |
2R | 25286936 | 2R | 20254981..20255141 | 1598..1438 | 790 | 99.4 | Minus |
2R | 25286936 | 2R | 20255197..20255349 | 1440..1288 | 765 | 100 | Minus |
2R | 25286936 | 2R | 20255886..20256037 | 942..791 | 760 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 20257889..20258324 | 598..163 | 2180 | 100 | Minus |
2R | 25260384 | 2R | 20257630..20257828 | 797..599 | 980 | 99.4 | Minus |
2R | 25260384 | 2R | 20256822..20257011 | 1129..940 | 935 | 99.4 | Minus |
2R | 25260384 | 2R | 20256607..20256773 | 1288..1122 | 835 | 100 | Minus |
2R | 25260384 | 2R | 20258395..20258559 | 165..1 | 825 | 100 | Minus |
2R | 25260384 | 2R | 20256180..20256340 | 1598..1438 | 790 | 99.3 | Minus |
2R | 25260384 | 2R | 20256396..20256548 | 1440..1288 | 765 | 100 | Minus |
2R | 25260384 | 2R | 20257085..20257236 | 942..791 | 760 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 16142926..16143075 | 793..942 | 100 | <- | Minus |
chr2R | 16142448..16142611 | 1125..1288 | 100 | <- | Minus |
chr2R | 16142668..16142849 | 943..1124 | 99 | <- | Minus |
chr2R | 16142032..16142178 | 1441..1587 | 100 | <- | Minus |
chr2R | 16142237..16142388 | 1289..1440 | 99 | <- | Minus |
chr2R | 16143476..16143669 | 599..792 | 98 | <- | Minus |
chr2R | 16143730..16144164 | 164..598 | 98 | <- | Minus |
chr2R | 16144238..16144400 | 1..163 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ate1-RB | 1..1455 | 79..1533 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ate1-RB | 1..1455 | 79..1533 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ate1-RB | 1..1455 | 79..1533 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ate1-RB | 1..1455 | 79..1533 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ate1-RB | 1..1455 | 79..1533 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ate1-RB | 22..1613 | 1..1592 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ate1-RB | 22..1613 | 1..1592 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ate1-RB | 31..1622 | 1..1592 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ate1-RB | 22..1613 | 1..1592 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ate1-RB | 31..1622 | 1..1592 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20255886..20256035 | 793..942 | 100 | <- | Minus |
2R | 20255408..20255571 | 1125..1288 | 100 | <- | Minus |
2R | 20255628..20255809 | 943..1124 | 100 | <- | Minus |
2R | 20254987..20255138 | 1441..1592 | 100 | <- | Minus |
2R | 20255197..20255348 | 1289..1440 | 100 | <- | Minus |
2R | 20256436..20256629 | 599..792 | 100 | <- | Minus |
2R | 20256690..20257124 | 164..598 | 100 | <- | Minus |
2R | 20257198..20257360 | 1..163 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20255886..20256035 | 793..942 | 100 | <- | Minus |
2R | 20255408..20255571 | 1125..1288 | 100 | <- | Minus |
2R | 20255628..20255809 | 943..1124 | 100 | <- | Minus |
2R | 20254987..20255138 | 1441..1592 | 100 | <- | Minus |
2R | 20255197..20255348 | 1289..1440 | 100 | <- | Minus |
2R | 20256436..20256629 | 599..792 | 100 | <- | Minus |
2R | 20256690..20257124 | 164..598 | 100 | <- | Minus |
2R | 20257198..20257360 | 1..163 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20255886..20256035 | 793..942 | 100 | <- | Minus |
2R | 20255408..20255571 | 1125..1288 | 100 | <- | Minus |
2R | 20255628..20255809 | 943..1124 | 100 | <- | Minus |
2R | 20254987..20255138 | 1441..1592 | 100 | <- | Minus |
2R | 20255197..20255348 | 1289..1440 | 100 | <- | Minus |
2R | 20256436..20256629 | 599..792 | 100 | <- | Minus |
2R | 20256690..20257124 | 164..598 | 100 | <- | Minus |
2R | 20257198..20257360 | 1..163 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 16142492..16142643 | 1441..1592 | 100 | <- | Minus |
arm_2R | 16142702..16142853 | 1289..1440 | 100 | <- | Minus |
arm_2R | 16142913..16143076 | 1125..1288 | 100 | <- | Minus |
arm_2R | 16143133..16143314 | 943..1124 | 100 | <- | Minus |
arm_2R | 16143391..16143540 | 793..942 | 100 | <- | Minus |
arm_2R | 16143941..16144134 | 599..792 | 100 | <- | Minus |
arm_2R | 16144703..16144865 | 1..163 | 100 | Minus | |
arm_2R | 16144195..16144629 | 164..598 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20256186..20256337 | 1441..1592 | 100 | <- | Minus |
2R | 20256396..20256547 | 1289..1440 | 100 | <- | Minus |
2R | 20256607..20256770 | 1125..1288 | 100 | <- | Minus |
2R | 20256827..20257008 | 943..1124 | 100 | <- | Minus |
2R | 20257085..20257234 | 793..942 | 100 | <- | Minus |
2R | 20257635..20257828 | 599..792 | 100 | <- | Minus |
2R | 20257889..20258323 | 164..598 | 100 | <- | Minus |
2R | 20258397..20258559 | 1..163 | 100 | Minus |
Translation from 78 to 1532
> LD33682.pep MSLSIVSYYGSQQSKCGYCAGANCSLSHGMHAYQLDCRDYQDLIDRGWRR CGYYCYKLRNQETCCPCYTIKCNGLEFKLSKSNKRILRRINRFLRDGKRE SKPEAGDGDGEADADYAIVAPEVTASEPQPQLPDKSPPVINVEQVASLAT AQRKPTKQATAAAVEAPTLGSNKSSLLSSSAAAPISNKPCKKAKQMRLDR RLAKLGDSASYSTKSLTQEKTLRDFLNTDSETNKHRLKLRLIHVYDDEFR RTLPQSFALYKKYQISIHNDPPKDQDAYKEHLQATPLQNEKPWDGPEMGY GSFHQQYWLDDKLIAVGVIDILPGCVSSVYFFYDPDYSFLSLGTYGSLRE IELVQSLAEKVPSLKYYYMGFYIHSCPKMRYKGKLSPSYLLCPETYEWLP LTDVIRAKLDEHKYQRLNEDPAARDVNEFLMEHLDEVKLLLGGRTRTDYK HFRQLRGTVSDDDIIIEYSKLVGKECARRMLYVK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13155-PA | 537 | GF13155-PA | 1..534 | 1..483 | 1792 | 65.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20876-PA | 530 | GG20876-PA | 1..527 | 1..483 | 2060 | 77.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22745-PA | 536 | GH22745-PA | 1..533 | 1..483 | 1558 | 58.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ate1-PB | 484 | CG9204-PB | 1..484 | 1..484 | 2576 | 100 | Plus |
Ate1-PA | 477 | CG9204-PA | 1..477 | 1..484 | 2530 | 98.6 | Plus |
Ate1-PD | 485 | CG9204-PD | 1..485 | 1..484 | 2366 | 93 | Plus |
Ate1-PC | 478 | CG9204-PC | 1..478 | 1..484 | 2320 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18527-PA | 537 | GI18527-PA | 1..534 | 1..483 | 1559 | 58.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17575-PA | 495 | GL17575-PA | 1..492 | 1..483 | 1688 | 68.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24830-PB | 480 | GA24830-PB | 1..477 | 1..483 | 1848 | 71.5 | Plus |
Dpse\GA24830-PA | 531 | GA24830-PA | 1..528 | 1..483 | 1789 | 64.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\Ate1-PA | 528 | GM19800-PA | 1..528 | 1..484 | 2244 | 80.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\Ate1-PA | 528 | GD25293-PA | 1..528 | 1..484 | 2268 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21393-PA | 541 | GJ21393-PA | 1..538 | 1..483 | 1622 | 60.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15677-PA | 541 | GK15677-PA | 1..541 | 1..484 | 1585 | 59.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13816-PA | 528 | GE13816-PA | 1..525 | 1..483 | 2174 | 78.1 | Plus |
Translation from 78 to 1532
> LD33682.hyp MSLSIVSYYGSQQSKCGYCAGANCSLSHGMHAYQLDCRDYQDLIDRGWRR CGYYCYKLRNQETCCPCYTIKCNGLEFKLSKSNKRILRRINRFLRDGKRE SKPEAGDGDGEADADYAIVAPEVTASEPQPQLPDKSPPVINVEQVASLAT AQRKPTKQATAAAVEAPTLGSNKSSLLSSSAAAPISNKPCKKAKQMRLDR RLAKLGDSASYSTKSLTQEKTLRDFLNTDSETNKHRLKLRLIHVYDDEFR RTLPQSFALYKKYQISIHNDPPKDQDAYKEHLQATPLQNEKPWDGPEMGY GSFHQQYWLDDKLIAVGVIDILPGCVSSVYFFYDPDYSFLSLGTYGSLRE IELVQSLAEKVPSLKYYYMGFYIHSCPKMRYKGKLSPSYLLCPETYEWLP LTDVIRAKLDEHKYQRLNEDPAARDVNEFLMEHLDEVKLLLGGRTRTDYK HFRQLRGTVSDDDIIIEYSKLVGKECARRMLYVK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ate1-PB | 484 | CG9204-PB | 1..484 | 1..484 | 2576 | 100 | Plus |
Ate1-PA | 477 | CG9204-PA | 1..477 | 1..484 | 2530 | 98.6 | Plus |
Ate1-PD | 485 | CG9204-PD | 1..485 | 1..484 | 2366 | 93 | Plus |
Ate1-PC | 478 | CG9204-PC | 1..478 | 1..484 | 2320 | 91.6 | Plus |