BDGP Sequence Production Resources |
Search the DGRC for LD33701
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 337 |
Well: | 1 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4449-RB |
Protein status: | LD33701.pep: gold |
Preliminary Size: | 1522 |
Sequenced Size: | 1514 |
Gene | Date | Evidence |
---|---|---|
CG4449 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4449 | 2002-05-18 | Blastp of sequenced clone |
CG4449 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4449 | 2008-04-29 | Release 5.5 accounting |
CG4449 | 2008-08-15 | Release 5.9 accounting |
CG4449 | 2008-12-18 | 5.12 accounting |
1514 bp (1514 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118950
> LD33701.complete TCTATTTGGTTTTGTGTTTGTGTTTATTGTTTGGCGCCGTTATTGGTTTA TTACTGACTGTTACTGAGTGCCCACGATGTCCGACGACGACTGCGATATA TTCAGTGCTGCTCGCAAGCGGATTCCCGAAATAGCTTTGCCCAAGAATCC TTACAATCTTGGCAATGATTCCTTCTCCAAGGAGGTGGACTACGATTTCA TTGAAGACCTCCCCAAGAAATCAACTAAAACTGGCAAACGAAAGAACCCT GCAGCGACGCGGAAAAATCCACCCAAAAGTCAGGATGATGCTTCGCCACC AAAACAGGCAGAACATAAGGCTGTGGAGCCAGAAGAGGATATGAGAACAG AGCGCTCCCTATCACCGGTATCCCTGTTGATATTGGAGATGGAAAAGAAA AATGGCCAGCAATCGGATGTGGAGAAGCACGCCAAAGAAAATGACGTTGG TCCTGTGGCCAGACGCACACGGTCATCGTTAAATAGGTCAGAAATGGCGC CACCACCTGTTTCACCGACTGTGGAGGTGCCCACACAGACGAAACCAAAG AAGCGCGGCCAAAAAAAGAGAACATCTCTAACAACCACAACCAGCAACTC TGCTTCGATGGAGGTCTCATTGCCAAGCATTCAGAACAATGAGCACATTA GCAGACGGTGGACGTTGGCCGAAGTTGCAGCCCGTTCCAAAGTGGTGGAC AGTATTGATCTGGTATCTGCGGTCGCTCCCCGAGTGGAGGGATTTGTTAA TCTAGACTCTGAAGACGAGGGTGAAAAGGAGGCTCCTCCTGTCGTAGAGG AAGAAAATATTTTTGATAACGATAATCCCACAATAGAAGTAGCTTTGTCG TGGCTTGGCGAGATCCAGATTTATAAATTGCGGCAGCACCAAAAGTTTAA GCATCTGTTCAAGGAGTTAGCATCACGCAATGGGATAGATGAGAATGATA TAACGGTGGATATGTACTATAACTTCGTTGGACCTGAGGATACGCCGCAC AGCATTGGTCTCAAATCATTTCATACGCTCACTGGCCATCCAACAAAGAG TCACAATAATAACAACGTGGCTGCTAAAATTGACTACAATCCAGAAGCTC TTTGCCGGAAACCTAAGAAGTTTCAAGTTAAAGTACAGGCGGATAAATGG AAGCATCCTTTGGTGATACCCATGAAGAAAACTGATAATTTCAAAATCAT ATTTATTAAGTGTGCTGAGGAGTTGAACTGTGATCCCCGAACCATTAAAT TGTTTTTTGACGGTGACTTGTTGGATCCAAATGATACGCCCAATAACCAG GATATGGAGGGCAACGAAGTTATAGATCTTAAAATAAAGGCTTAAATTTT GAGCAAATTTATCTATTCTAGCCGAAAAATATTTTTAAAAGAAATTATAT TAATGTTTTGTTTACGATTAGTTAATTGCTGTGCAAGATTTATTTTATTA TCAAATGTTTCTATGTATGATTGAATATTTCTAATTTTCTTTGTAAAAAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4449-RB | 1764 | CG4449-RB | 216..1710 | 1..1495 | 7475 | 100 | Plus |
CG4449-RA | 1770 | CG4449-RA | 852..1716 | 631..1495 | 4325 | 100 | Plus |
CG4449.b | 1761 | CG4449.b | 847..1707 | 635..1495 | 4305 | 100 | Plus |
CG4449-RA | 1770 | CG4449-RA | 216..846 | 1..631 | 3155 | 100 | Plus |
CG4449.b | 1761 | CG4449.b | 210..840 | 1..631 | 3155 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 19074015..19074513 | 631..133 | 2495 | 100 | Minus |
chr3R | 27901430 | chr3R | 19072852..19073091 | 1494..1255 | 1200 | 100 | Minus |
chr3R | 27901430 | chr3R | 19073150..19073372 | 1254..1032 | 1115 | 100 | Minus |
chr3R | 27901430 | chr3R | 19073432..19073611 | 1031..852 | 900 | 100 | Minus |
chr3R | 27901430 | chr3R | 19074579..19074712 | 134..1 | 670 | 100 | Minus |
chr3R | 27901430 | chr3R | 19073834..19073949 | 747..632 | 580 | 100 | Minus |
chr3R | 27901430 | chr3R | 19073665..19073772 | 853..746 | 540 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 23250606..23251104 | 631..133 | 2495 | 100 | Minus |
3R | 32079331 | 3R | 23249442..23249682 | 1495..1255 | 1205 | 100 | Minus |
3R | 32079331 | 3R | 23249741..23249963 | 1254..1032 | 1115 | 100 | Minus |
3R | 32079331 | 3R | 23250023..23250202 | 1031..852 | 900 | 100 | Minus |
3R | 32079331 | 3R | 23251167..23251300 | 134..1 | 670 | 100 | Minus |
3R | 32079331 | 3R | 23250425..23250540 | 747..632 | 580 | 100 | Minus |
3R | 32079331 | 3R | 23250256..23250363 | 853..746 | 540 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 22991437..22991935 | 631..133 | 2495 | 100 | Minus |
3R | 31820162 | 3R | 22990273..22990513 | 1495..1255 | 1205 | 100 | Minus |
3R | 31820162 | 3R | 22990572..22990794 | 1254..1032 | 1115 | 100 | Minus |
3R | 31820162 | 3R | 22990854..22991033 | 1031..852 | 900 | 100 | Minus |
3R | 31820162 | 3R | 22991998..22992131 | 134..1 | 670 | 100 | Minus |
3R | 31820162 | 3R | 22991256..22991371 | 747..632 | 580 | 100 | Minus |
3R | 31820162 | 3R | 22991087..22991194 | 853..746 | 540 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 19073150..19073372 | 1032..1254 | 100 | <- | Minus |
chr3R | 19073432..19073610 | 853..1031 | 100 | <- | Minus |
chr3R | 19073666..19073772 | 746..852 | 100 | <- | Minus |
chr3R | 19073836..19073949 | 632..745 | 100 | <- | Minus |
chr3R | 19074015..19074511 | 135..631 | 100 | <- | Minus |
chr3R | 19074579..19074712 | 1..134 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4449-RA | 1..1275 | 77..1345 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4449-RB | 1..1269 | 77..1345 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4449-RB | 1..1269 | 77..1345 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4449-RA | 1..1275 | 77..1345 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4449-RB | 1..1269 | 77..1345 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4449-RA | 178..1677 | 1..1494 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4449-RB | 178..1671 | 1..1494 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4449-RB | 178..1671 | 1..1494 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4449-RA | 178..1677 | 1..1494 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4449-RB | 178..1671 | 1..1494 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23249443..23249682 | 1255..1494 | 100 | <- | Minus |
3R | 23249741..23249963 | 1032..1254 | 100 | <- | Minus |
3R | 23250023..23250201 | 853..1031 | 100 | <- | Minus |
3R | 23250257..23250363 | 746..852 | 100 | <- | Minus |
3R | 23250427..23250540 | 632..745 | 100 | <- | Minus |
3R | 23250606..23251102 | 135..631 | 100 | <- | Minus |
3R | 23251167..23251300 | 1..134 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23249443..23249682 | 1255..1494 | 100 | <- | Minus |
3R | 23249741..23249963 | 1032..1254 | 100 | <- | Minus |
3R | 23250023..23250201 | 853..1031 | 100 | <- | Minus |
3R | 23250257..23250363 | 746..852 | 100 | <- | Minus |
3R | 23250427..23250540 | 632..745 | 100 | <- | Minus |
3R | 23250606..23251102 | 135..631 | 100 | <- | Minus |
3R | 23251167..23251300 | 1..134 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23249443..23249682 | 1255..1494 | 100 | <- | Minus |
3R | 23249741..23249963 | 1032..1254 | 100 | <- | Minus |
3R | 23250023..23250201 | 853..1031 | 100 | <- | Minus |
3R | 23250257..23250363 | 746..852 | 100 | <- | Minus |
3R | 23250427..23250540 | 632..745 | 100 | <- | Minus |
3R | 23250606..23251102 | 135..631 | 100 | <- | Minus |
3R | 23251167..23251300 | 1..134 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 19076149..19076262 | 632..745 | 100 | <- | Minus |
arm_3R | 19075463..19075685 | 1032..1254 | 100 | <- | Minus |
arm_3R | 19075745..19075923 | 853..1031 | 100 | <- | Minus |
arm_3R | 19075165..19075404 | 1255..1494 | 100 | <- | Minus |
arm_3R | 19075979..19076085 | 746..852 | 100 | <- | Minus |
arm_3R | 19076328..19076824 | 135..631 | 100 | <- | Minus |
arm_3R | 19076889..19077022 | 1..134 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22990274..22990513 | 1255..1494 | 100 | <- | Minus |
3R | 22990572..22990794 | 1032..1254 | 100 | <- | Minus |
3R | 22990854..22991032 | 853..1031 | 100 | <- | Minus |
3R | 22991088..22991194 | 746..852 | 100 | <- | Minus |
3R | 22991258..22991371 | 632..745 | 100 | <- | Minus |
3R | 22991437..22991933 | 135..631 | 100 | <- | Minus |
3R | 22991998..22992131 | 1..134 | 100 | Minus |
Translation from 76 to 1344
> LD33701.pep MSDDDCDIFSAARKRIPEIALPKNPYNLGNDSFSKEVDYDFIEDLPKKST KTGKRKNPAATRKNPPKSQDDASPPKQAEHKAVEPEEDMRTERSLSPVSL LILEMEKKNGQQSDVEKHAKENDVGPVARRTRSSLNRSEMAPPPVSPTVE VPTQTKPKKRGQKKRTSLTTTTSNSASMEVSLPSIQNNEHISRRWTLAEV AARSKVVDSIDLVSAVAPRVEGFVNLDSEDEGEKEAPPVVEEENIFDNDN PTIEVALSWLGEIQIYKLRQHQKFKHLFKELASRNGIDENDITVDMYYNF VGPEDTPHSIGLKSFHTLTGHPTKSHNNNNVAAKIDYNPEALCRKPKKFQ VKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLD PNDTPNNQDMEGNEVIDLKIKA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18021-PA | 435 | GF18021-PA | 1..435 | 1..422 | 1066 | 53.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12448-PA | 433 | GG12448-PA | 1..432 | 1..421 | 1552 | 73 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21394-PA | 395 | GH21394-PA | 1..395 | 1..421 | 728 | 42.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rad60-PC | 422 | CG4449-PC | 1..422 | 1..422 | 2208 | 100 | Plus |
Rad60-PB | 422 | CG4449-PB | 1..422 | 1..422 | 2208 | 100 | Plus |
Rad60-PD | 424 | CG4449-PD | 1..424 | 1..422 | 2195 | 99.5 | Plus |
Rad60-PA | 424 | CG4449-PA | 1..424 | 1..422 | 2195 | 99.5 | Plus |
Rad60-PF | 421 | CG4449-PF | 1..421 | 1..422 | 2191 | 99.8 | Plus |
Rad60-PE | 423 | CG4449-PE | 1..423 | 1..422 | 2189 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10504-PA | 421 | GI10504-PA | 1..421 | 1..421 | 812 | 44.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23037-PA | 400 | GL23037-PA | 1..399 | 1..421 | 856 | 48.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18191-PA | 400 | GA18191-PA | 1..399 | 1..421 | 837 | 47.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23580-PA | 418 | GM23580-PA | 1..418 | 1..422 | 1731 | 86.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18396-PA | 419 | GD18396-PA | 1..419 | 1..422 | 1746 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23185-PA | 405 | GJ23185-PA | 1..402 | 1..418 | 844 | 47.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13227-PA | 406 | GK13227-PA | 4..405 | 3..421 | 896 | 47.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23972-PA | 428 | GE23972-PA | 1..427 | 1..421 | 1648 | 77.4 | Plus |
Translation from 76 to 1344
> LD33701.hyp MSDDDCDIFSAARKRIPEIALPKNPYNLGNDSFSKEVDYDFIEDLPKKST KTGKRKNPAATRKNPPKSQDDASPPKQAEHKAVEPEEDMRTERSLSPVSL LILEMEKKNGQQSDVEKHAKENDVGPVARRTRSSLNRSEMAPPPVSPTVE VPTQTKPKKRGQKKRTSLTTTTSNSASMEVSLPSIQNNEHISRRWTLAEV AARSKVVDSIDLVSAVAPRVEGFVNLDSEDEGEKEAPPVVEEENIFDNDN PTIEVALSWLGEIQIYKLRQHQKFKHLFKELASRNGIDENDITVDMYYNF VGPEDTPHSIGLKSFHTLTGHPTKSHNNNNVAAKIDYNPEALCRKPKKFQ VKVQADKWKHPLVIPMKKTDNFKIIFIKCAEELNCDPRTIKLFFDGDLLD PNDTPNNQDMEGNEVIDLKIKA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4449-PC | 422 | CG4449-PC | 1..422 | 1..422 | 2208 | 100 | Plus |
CG4449-PB | 422 | CG4449-PB | 1..422 | 1..422 | 2208 | 100 | Plus |
CG4449-PD | 424 | CG4449-PD | 1..424 | 1..422 | 2195 | 99.5 | Plus |
CG4449-PA | 424 | CG4449-PA | 1..424 | 1..422 | 2195 | 99.5 | Plus |
CG4449-PF | 421 | CG4449-PF | 1..421 | 1..422 | 2191 | 99.8 | Plus |