BDGP Sequence Production Resources |
Search the DGRC for LD33756
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 337 |
Well: | 56 |
Vector: | pOT2 |
Associated Gene/Transcript | unk-RB |
Protein status: | LD33756.pep: validated not full length |
Preliminary Size: | 4482 |
Sequenced Size: | 2710 |
Gene | Date | Evidence |
---|---|---|
CG4620 | 2001-01-01 | Release 2 assignment |
CG4620 | 2001-07-04 | Blastp of sequenced clone |
unk | 2008-04-29 | Release 5.5 accounting |
unk | 2008-08-15 | Release 5.9 accounting |
unk | 2008-12-18 | 5.12 accounting |
2710 bp (2710 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051832
> LD33756.complete GCAAATGAAACGAACAAGCTGCTGCTTTCCTCGCAGCAGGAAAAACCAAA TCACTACACCTACCTGAAGGAGTTCCGCGTGGAGCAGTGCCAGTCGTTTT TACAGCACAAGTGCAACCAGCATCGCCCCTTCGTCTGTTTCAATTGGCAT TTTCAAAACCAGCGTCGGCGTCGTCCAGTGCGAAAACGCGATGGCACCTT CAACTACAGTGCGGATAACTATTGCACCAAATACGACGAGACCACTGGGA TTTGTCCCGAGGGCGACGAATGCCCCTACTTACACCGCACTGCTGGCGAC ACCGAAAGGCGATACCATCTGCGCTACTACAAGACATGCATGTGCGTCCA CGACACCGACAGCCGAGGATACTGCGTCAAGAATGGACTACACTGCGCCT TCGCCCACGGCATGCAGGACCAGCGCCCACCGGTTTATGACATCAAAGAG CTGGAGACCCTGCAGAACGCAGAGAGCACACTGGACAGCACTAATGCTTT GAATGCCCTGGACAAGGAGCGCAATTTGATGAACGAGGATCCCAAGTGGC AGGACACCAACTACGTGCTGGCCAATTACAAGACAGAGCCCTGCAAGCGC CCACCGCGCCTGTGCCGCCAAGGATACGCTTGTCCACAGTACCACAATAG CAAGGACAAACGTCGCTCGCCCAGAAAATACAAGTACAGGTCCACTCCTT GCCCCAATGTCAAGCACGGCGAGGAATGGGGAGAACCGGGCAACTGCGAG GCCGGCGATAACTGCCAGTACTGCCACACACGCACCGAGCAGCAGTTCCA CCCGGAGATCTACAAGTCGACCAAGTGCAACGATGTCCAGCAGGCCGGAT ACTGTCCGCGCAGCGTCTTCTGCGCCTTTGCCCATGTGGAACCTTGCTCA ATGGACGATCCGCGCGAGAACTCATTGTCGGCGAGTCTGGCCAATACTAG CTTATTAACACGTTCCTCGGCGCCAATTAACATTCCTAATACGACTCTAA GTAACTCAATTAACGATTTTAACTCAGGTAGCTTTGCCGTCAACATTCCC AGCAGCTCGCTCACCTACAGTCCCACCAACCATGCCAATCTCTTCAACGT GGACGCCTTCAACTATGGCGGCTCAAACAAACTCAGCAATTCCCTTTCGG CCACCCAGAACGATAGCAGTCTCTTCTTTCCGTCGCGCATCATATCGCCT GGCTTTGGCGATGGCTTGTCGATTAGTCCTTCGGTAAGGATATCCGAATT GAATACCATACGCGACGACATCAACAGCAGCTCGGTGGGAAATAGTCTGT TCGAGAACACTCTCAATACGGCCAAGAATGCGTTTAGCCTTCAATCTCTG CAGTCGCAAAACAACAGCGACTTGGGTCGCATCACCAATGAGCTGCTCAC GAAGAATGCTCAAATTCACAAGTTGAACGGACGTTTCGAGGACATGGCAT GCAAGCTAAAGATCGCGGAGCTCCATCGGGACAAGGCCAAGCAGGAGGCG CAGGAGTGGAAGGAGCGCTATGACCTAGCACAGATACAGCTAAATTTGCC AGCAGAGCTTCGGGACTTGTCCATACAGAAATTGAAGCAATTGCAGTCCA AGCTGCGCACCGACTTGGAGGAGGTCGACAAAGTATTATATTTAGAAAAT GCCAAGAAGTGCATGAAGTGCGAGGAGAACAATCGCACGGTTACTCTGGA GCCGTGCAACCACCTGTCTATTTGCAATACATGCGCTGAATCGGTCACCG AGTGTCCCTACTGTCAGGTGCCGGTAATAACCACCCACACCTAGAACATG TTTTATCAGCAACAGGACCACAAGTGGCCCTTTGGCTGAAAATCGGATAG GGATGGGAAAGGGGATTCCGATGGGATATGAATGGATCATGGGGATCAAG ACCGCGAACAGCATGACAATGTGGTACTCACAAAGCAAACTTTAGTCTTA AGCAAAACGTTGAAACTTTTGAACAGTTAGGATTTGACACATGCCTACTA ATTGTGCATGTGGCAGGGAATATATAATTTATGTTTTCAATCTACTCAAA ATATGCAAATTATCGTCATGAATATTAGTAATTACTAGGCACAAACTATT AATTGAATTAGCTAGCTGCTCTAAACGAATAAGTATGTAATTTTATTTTT GTTTATTTTTTCTCATATCGAATCGAATACAGGAAAAAACATTTTAAATT GATTTTGTACTATGATTTATGTAACCAACTCTTTTAATTTTGTTTAATAT TCAATGTTTAGGCATACATATTTTCTAATCTACTGCACGAATTTGCAATG TCTCATTTATTTTTTTTTTAACCACATATGTATCTCTATATTTGTATTTA AATATGCTACACTTTCAGTCATATTGTACTTTTCACTAGTATTACATAAG AAATTATGAGAACTAAACAATTACAAGATGTAATTGAATGAAAGATATAT AAATATATAATATATTAATTTTTCTAGACACTTTTAGCAATTGACTATTA ACAAATTTATAGAAACCAACAAATTTAACAATATATTGTCGCATAGAAGA GCAGAAAACAACCACAAACAAACAAATACCACCAGTGATTTTATATAAGC CGATTTTCAAACTGTATTTTTTATGTATGTGTTTCAAACTTGTGAATGCA AACTACAACTAAAAGCCAAGACAATGGTCATAAAATCAATGTAAAAAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
unk.a | 2957 | unk.a | 1154..2955 | 893..2694 | 9010 | 100 | Plus |
unk.f | 4197 | unk.f | 1154..2955 | 893..2694 | 9010 | 100 | Plus |
unk.k | 3834 | unk.k | 1154..2955 | 893..2694 | 9010 | 100 | Plus |
unk.a | 2957 | unk.a | 43..950 | 1..908 | 4495 | 99.6 | Plus |
unk.f | 4197 | unk.f | 43..950 | 1..908 | 4495 | 99.6 | Plus |
unk.k | 3834 | unk.k | 43..950 | 1..908 | 4495 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 18976478..18977575 | 2692..1595 | 5445 | 99.7 | Minus |
chr3R | 27901430 | chr3R | 18977630..18978211 | 1596..1015 | 2880 | 99.7 | Minus |
chr3R | 27901430 | chr3R | 18979510..18979931 | 691..270 | 2065 | 99.3 | Minus |
chr3R | 27901430 | chr3R | 18980937..18981146 | 269..60 | 1050 | 100 | Minus |
chr3R | 27901430 | chr3R | 18979246..18979450 | 892..688 | 1025 | 100 | Minus |
chr3R | 27901430 | chr3R | 18978281..18978403 | 1015..893 | 615 | 100 | Minus |
chr3R | 27901430 | chr3R | 18981215..18981273 | 59..1 | 295 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 23153040..23154139 | 2694..1595 | 5500 | 100 | Minus |
3R | 32079331 | 3R | 23154194..23154775 | 1596..1015 | 2910 | 100 | Minus |
3R | 32079331 | 3R | 23156072..23156493 | 691..270 | 2110 | 100 | Minus |
3R | 32079331 | 3R | 23157501..23157710 | 269..60 | 1050 | 100 | Minus |
3R | 32079331 | 3R | 23155809..23156013 | 892..688 | 1025 | 100 | Minus |
3R | 32079331 | 3R | 23154845..23154967 | 1015..893 | 615 | 100 | Minus |
3R | 32079331 | 3R | 23157779..23157837 | 59..1 | 295 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 22893871..22894970 | 2694..1595 | 5500 | 100 | Minus |
3R | 31820162 | 3R | 22895025..22895606 | 1596..1015 | 2910 | 100 | Minus |
3R | 31820162 | 3R | 22896903..22897324 | 691..270 | 2110 | 100 | Minus |
3R | 31820162 | 3R | 22898332..22898541 | 269..60 | 1050 | 100 | Minus |
3R | 31820162 | 3R | 22896640..22896844 | 892..688 | 1025 | 100 | Minus |
3R | 31820162 | 3R | 22895676..22895798 | 1015..893 | 615 | 100 | Minus |
3R | 31820162 | 3R | 22898610..22898668 | 59..1 | 295 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 18976478..18977573 | 1597..2692 | 97 | <- | Minus |
chr3R | 18977630..18978210 | 1016..1596 | 99 | <- | Minus |
chr3R | 18978281..18978403 | 893..1015 | 100 | <- | Minus |
chr3R | 18979246..18979448 | 690..892 | 100 | <- | Minus |
chr3R | 18979512..18979931 | 270..689 | 99 | <- | Minus |
chr3R | 18980937..18981146 | 60..269 | 100 | <- | Minus |
chr3R | 18981215..18981273 | 1..59 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
unk-RB | 7..1800 | 1..1794 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
unk-RB | 7..1800 | 1..1794 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
unk-RB | 7..1800 | 1..1794 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
unk-RB | 7..1800 | 1..1794 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
unk-RB | 7..1800 | 1..1794 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
unk-RB | 34..2725 | 1..2692 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
unk-RB | 34..2725 | 1..2692 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
unk-RB | 26..2717 | 1..2692 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
unk-RB | 34..2725 | 1..2692 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
unk-RB | 26..2717 | 1..2692 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23153042..23154137 | 1597..2692 | 100 | <- | Minus |
3R | 23154194..23154774 | 1016..1596 | 100 | <- | Minus |
3R | 23154845..23154967 | 893..1015 | 100 | <- | Minus |
3R | 23155809..23156011 | 690..892 | 100 | <- | Minus |
3R | 23156074..23156493 | 270..689 | 100 | <- | Minus |
3R | 23157501..23157710 | 60..269 | 100 | <- | Minus |
3R | 23157779..23157837 | 1..59 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23153042..23154137 | 1597..2692 | 100 | <- | Minus |
3R | 23154194..23154774 | 1016..1596 | 100 | <- | Minus |
3R | 23154845..23154967 | 893..1015 | 100 | <- | Minus |
3R | 23155809..23156011 | 690..892 | 100 | <- | Minus |
3R | 23156074..23156493 | 270..689 | 100 | <- | Minus |
3R | 23157501..23157710 | 60..269 | 100 | <- | Minus |
3R | 23157779..23157837 | 1..59 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23153042..23154137 | 1597..2692 | 100 | <- | Minus |
3R | 23154194..23154774 | 1016..1596 | 100 | <- | Minus |
3R | 23154845..23154967 | 893..1015 | 100 | <- | Minus |
3R | 23155809..23156011 | 690..892 | 100 | <- | Minus |
3R | 23156074..23156493 | 270..689 | 100 | <- | Minus |
3R | 23157501..23157710 | 60..269 | 100 | <- | Minus |
3R | 23157779..23157837 | 1..59 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 18980567..18980689 | 893..1015 | 100 | <- | Minus |
arm_3R | 18981531..18981733 | 690..892 | 100 | <- | Minus |
arm_3R | 18979916..18980496 | 1016..1596 | 100 | <- | Minus |
arm_3R | 18978764..18979859 | 1597..2692 | 100 | <- | Minus |
arm_3R | 18981796..18982215 | 270..689 | 100 | <- | Minus |
arm_3R | 18983223..18983432 | 60..269 | 100 | <- | Minus |
arm_3R | 18983501..18983559 | 1..59 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22893873..22894968 | 1597..2692 | 100 | <- | Minus |
3R | 22895025..22895605 | 1016..1596 | 100 | <- | Minus |
3R | 22895676..22895798 | 893..1015 | 100 | <- | Minus |
3R | 22896640..22896842 | 690..892 | 100 | <- | Minus |
3R | 22896905..22897324 | 270..689 | 100 | <- | Minus |
3R | 22898332..22898541 | 60..269 | 100 | <- | Minus |
3R | 22898610..22898668 | 1..59 | 100 | Minus |
Translation from 0 to 1793
> LD33756.pep ANETNKLLLSSQQEKPNHYTYLKEFRVEQCQSFLQHKCNQHRPFVCFNWH FQNQRRRRPVRKRDGTFNYSADNYCTKYDETTGICPEGDECPYLHRTAGD TERRYHLRYYKTCMCVHDTDSRGYCVKNGLHCAFAHGMQDQRPPVYDIKE LETLQNAESTLDSTNALNALDKERNLMNEDPKWQDTNYVLANYKTEPCKR PPRLCRQGYACPQYHNSKDKRRSPRKYKYRSTPCPNVKHGEEWGEPGNCE AGDNCQYCHTRTEQQFHPEIYKSTKCNDVQQAGYCPRSVFCAFAHVEPCS MDDPRENSLSASLANTSLLTRSSAPINIPNTTLSNSINDFNSGSFAVNIP SSSLTYSPTNHANLFNVDAFNYGGSNKLSNSLSATQNDSSLFFPSRIISP GFGDGLSISPSVRISELNTIRDDINSSSVGNSLFENTLNTAKNAFSLQSL QSQNNSDLGRITNELLTKNAQIHKLNGRFEDMACKLKIAELHRDKAKQEA QEWKERYDLAQIQLNLPAELRDLSIQKLKQLQSKLRTDLEEVDKVLYLEN AKKCMKCEENNRTVTLEPCNHLSICNTCAESVTECPYCQVPVITTHT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18028-PA | 595 | GF18028-PA | 3..595 | 3..597 | 3113 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12456-PA | 599 | GG12456-PA | 3..599 | 1..597 | 3208 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23839-PA | 484 | GH23839-PA | 2..467 | 1..468 | 2288 | 92.3 | Plus |
Dgri\GH23844-PA | 110 | GH23844-PA | 7..110 | 494..597 | 495 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
unk-PE | 599 | CG4620-PE | 3..599 | 1..597 | 3245 | 100 | Plus |
unk-PC | 599 | CG4620-PC | 3..599 | 1..597 | 3245 | 100 | Plus |
unk-PB | 599 | CG4620-PB | 3..599 | 1..597 | 3245 | 100 | Plus |
unk-PA | 599 | CG4620-PA | 3..599 | 1..597 | 3245 | 100 | Plus |
unk-PF | 600 | CG4620-PF | 3..600 | 1..597 | 3233 | 99.8 | Plus |
unk-PG | 673 | CG4620-PG | 3..673 | 1..597 | 2930 | 83.5 | Plus |
unk-PD | 672 | CG4620-PD | 3..672 | 1..597 | 2929 | 83.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24572-PA | 596 | GI24572-PA | 2..596 | 1..597 | 2910 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23594-PA | 596 | GL23594-PA | 2..596 | 1..597 | 3016 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18308-PA | 596 | GA18308-PA | 2..596 | 1..597 | 3016 | 94.8 | Plus |
Dpse\GA18308-PB | 555 | GA18308-PB | 2..555 | 1..597 | 2761 | 88.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23588-PA | 614 | GM23588-PA | 18..614 | 1..597 | 3216 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18402-PA | 581 | GD18402-PA | 3..558 | 1..559 | 2903 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22639-PA | 592 | GJ22639-PA | 2..592 | 1..597 | 2902 | 92 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12832-PA | 604 | GK12832-PA | 4..604 | 3..597 | 2985 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23979-PA | 599 | GE23979-PA | 3..599 | 1..597 | 3200 | 98.8 | Plus |
Translation from 0 to 1793
> LD33756.hyp ANETNKLLLSSQQEKPNHYTYLKEFRVEQCQSFLQHKCNQHRPFVCFNWH FQNQRRRRPVRKRDGTFNYSADNYCTKYDETTGICPEGDECPYLHRTAGD TERRYHLRYYKTCMCVHDTDSRGYCVKNGLHCAFAHGMQDQRPPVYDIKE LETLQNAESTLDSTNALNALDKERNLMNEDPKWQDTNYVLANYKTEPCKR PPRLCRQGYACPQYHNSKDKRRSPRKYKYRSTPCPNVKHGEEWGEPGNCE AGDNCQYCHTRTEQQFHPEIYKSTKCNDVQQAGYCPRSVFCAFAHVEPCS MDDPRENSLSASLANTSLLTRSSAPINIPNTTLSNSINDFNSGSFAVNIP SSSLTYSPTNHANLFNVDAFNYGGSNKLSNSLSATQNDSSLFFPSRIISP GFGDGLSISPSVRISELNTIRDDINSSSVGNSLFENTLNTAKNAFSLQSL QSQNNSDLGRITNELLTKNAQIHKLNGRFEDMACKLKIAELHRDKAKQEA QEWKERYDLAQIQLNLPAELRDLSIQKLKQLQSKLRTDLEEVDKVLYLEN AKKCMKCEENNRTVTLEPCNHLSICNTCAESVTECPYCQVPVITTHT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
unk-PE | 599 | CG4620-PE | 3..599 | 1..597 | 3245 | 100 | Plus |
unk-PC | 599 | CG4620-PC | 3..599 | 1..597 | 3245 | 100 | Plus |
unk-PB | 599 | CG4620-PB | 3..599 | 1..597 | 3245 | 100 | Plus |
unk-PA | 599 | CG4620-PA | 3..599 | 1..597 | 3245 | 100 | Plus |
unk-PF | 600 | CG4620-PF | 3..600 | 1..597 | 3233 | 99.8 | Plus |