BDGP Sequence Production Resources |
Search the DGRC for LD33793
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 337 |
Well: | 93 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8379-RB |
Protein status: | LD33793.pep: gold |
Sequenced Size: | 2443 |
Gene | Date | Evidence |
---|---|---|
CG8379-RB | 2011-02-22 | Manual selection by Sue Celniker |
2443 bp assembled on 2011-06-10
GenBank Submission: BT128739.1
> LD33793.complete ATTGCCCATCCACAAATTCTGCCAACTTCCGATATATTTTTACAGCAGCA GACTATGAGTTTCTGAAACTAGTCCCCTAGGTCAATAATATCCACATCCA GTCATGACCTCTCGCAAGCGCAGTGGCAGCGGCTCCACCAAGCGGCCCAA GGAGAAGGTGGTCTATATATATGAGCTGTTGTGCCGGGGCGAGGATCCCA GCAGCGAGAGTCCCGAATTTTGGAACGAGTTCTTCCTGCTGCAGCCGAAC TTCGAGGCGCTGGAGAATGAGATTGGCAAACTCAACAACGAGCAGCTGCA GCTGGTGAAACCGAACCTGAACACCCTCTTCCAGAGGTGCATCGAAATGC TTGACACGGAAGATCATCCTAAGCGGCTGTGCAACAGCCTACACACGCTG TGCTCCCTGTTCTACGGGATCTTTAAGAAGTCCAACGCAGAACCAACATT AAACATCCTAAACGAGATCTTCGGCCATGAGAAGATGGACGAATGGCTGA AGCTACTCATGCAGTACTGCAATCGCATCCTCCTGGGCGATGTGCCCGAA AACGCTCGATTTATGTGCCTCAAACTGCTGCAGGTTCTGGTTACGGGCAC GGATAACGTCAACCAGAACGCCCTCTTCGAGCATCTAATGATGCACAGCA TGTTCGACGCCTTTGTTCGGCTACTCAGTGATCCTACGTTCCGTAGCCAG CATGGACACGACATCGTTATCCTACTTACTATCCTGGTCAACTATCGCAA GCATGAAGCCACTAACCCCTATGTGGTGCAGCTCTCCATACTCGCTGATG AGCTGGCTTTAAATGGCTATGGCCAAATGATATCGCAATCGCTAATTGAT TTCTGTCGCCAGTACATTCAGAGCCTTAACAATGTGCAATCCTCTTCCTG GTTTTCGTCGCTGTCGAATATTGTGGGCAACATGTTTGTGTCGGATGAAG GATGCGAACGGGTGCAGCAGATCAAGGCGAATAATGGCCTTCTACTTGCC CTCTACGAGGCAGTGCACCTGAATCGGAACTTCATCACAACTCTGGCTCA CACGCAGGCAGAGTCCAGTGCCCCGCCCTCGCCCAGTAACACATTGAGTC TGGCCCAACCTGTGCCGGATCTATCTAATGCACCCATCATTGACATTACG CAGTATCCCACCAATCTGCTGGTGGCCGTATTTCAGTACTGTTCCATCGT GATGCAGGACAATAAGAACGAATCGAGCATTGCTAATCTGAAGCTGTGTT TCCTCATCCTCACCTGCATTTCCGAGGACCAGTACGCCAACTCCATGATG CACGACAGCAATCTTACCTTCAAAGTCATGCTGCATCGGGCGCAGATGCG TCATCGCAAGCTGAATGTGGATCGGGTGGGCAAGTCCCAGCCTTTGGCTG CCACTCTACTGGACCTCCTGGTGGAGTTCATTGTATCGCATTTGATGAAA AAGTTCCCGATGGAGCTGTATCTGCTCTGCATTGGAGTTATCCATCGAAT CTTGTGCTATCAAAAGAGATGTAGAGTGCGGCTCAATTATCCGTGGAAGG AACTTTGGTCGGCTCTCATTGGTCTTCTGCGGTTCTTGGTCAACCAAGAA CAGACGCTGGTTAAAAAGTGCAACATTTTTCATCTGTCGCTACAGGTGGT GAATATATTTAATCTGTTTATTACGTACGGTGATACTTTCCTGGCCACAA CAAATAGCTATGATGAGCTCTACTACGAACTGAACCGCGAGGAGAAGGTA TTTACGGAAATACATGCCATGGTTCTTCGCTATACAACGATGCCGGACTG CGAATACAAAGACGATGTAATCAAGCTCTTAAACGCTTTGGTAAATATCC TGGCCATTGTTAAGCACTTTCAGAACAAGATCAAGGAATGGCTGGCCGAA CAAGGCCTCTCTACGCCCACGGAGGAGCAGATACTCGACGTGGTGCGCAA GAACTACGACCTAACGCTCAAACTGCAGGACTCCCTGGACCAATACGAAC GTTACACAGAAACGCCGCTGCACACCAACTTCTTTAAGTTGATGGTTCGC GATGTTGTCAACGATACGCGCAAGCACATCTACGGCTATGTGAAGGAGGC AGTATCTGTTATTCCGGACCAGGAAATTCTCCTCAGTTCCTCTATGACAT CCGTTTCGGCCGGTACAGCCACTCCGGCTTCAGCAACAGCAGTGCCAGAA GCAAAAGCGTTGCCTTCTTTTGCTTAGTTTTGTAATTATATTTTAAATAT TCAAATCTCTGGATGCGTAAACTCGATGTAATCTATAAGATTTAAAGTGC TTTGCGAGACTTTTATAGCTAAAACAGTGCACTTAAAGCAAAAACATATT CTGTGCAAGTTTTTTACACAAGTATACAAAATATATAAATATTACGTGTA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 4651591..4652547 | 816..1772 | 4785 | 100 | Plus |
chr3R | 27901430 | chr3R | 4652601..4653228 | 1772..2399 | 3140 | 100 | Plus |
chr3R | 27901430 | chr3R | 4650910..4651367 | 359..816 | 2290 | 100 | Plus |
chr3R | 27901430 | chr3R | 4650645..4650848 | 156..359 | 1020 | 100 | Plus |
chr3R | 27901430 | chr3R | 4650411..4650569 | 1..159 | 795 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 8825632..8826588 | 816..1772 | 4785 | 100 | Plus |
3R | 32079331 | 3R | 8826642..8827277 | 1772..2407 | 3150 | 99.7 | Plus |
3R | 32079331 | 3R | 8824951..8825408 | 359..816 | 2290 | 100 | Plus |
3R | 32079331 | 3R | 8824686..8824889 | 156..359 | 1020 | 100 | Plus |
3R | 32079331 | 3R | 8824452..8824610 | 1..159 | 795 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 8566463..8567419 | 816..1772 | 4785 | 100 | Plus |
3R | 31820162 | 3R | 8567473..8568108 | 1772..2407 | 3150 | 99.6 | Plus |
3R | 31820162 | 3R | 8565782..8566239 | 359..816 | 2290 | 100 | Plus |
3R | 31820162 | 3R | 8565517..8565720 | 156..359 | 1020 | 100 | Plus |
3R | 31820162 | 3R | 8565283..8565441 | 1..159 | 795 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 4650411..4650567 | 1..157 | 100 | -> | Plus |
chr3R | 4650647..4650848 | 158..359 | 100 | -> | Plus |
chr3R | 4650911..4651367 | 360..816 | 100 | -> | Plus |
chr3R | 4651592..4652547 | 817..1772 | 100 | -> | Plus |
chr3R | 4652602..4653228 | 1773..2399 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8379-RB | 1..2124 | 104..2227 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8379-RB | 1..2124 | 104..2227 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8379-RB | 1..2124 | 104..2227 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8379-RB | 43..2441 | 1..2399 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8379-RB | 42..2440 | 1..2399 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8379-RB | 42..2440 | 1..2399 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8824452..8824608 | 1..157 | 100 | -> | Plus |
3R | 8824688..8824889 | 158..359 | 100 | -> | Plus |
3R | 8824952..8825408 | 360..816 | 100 | -> | Plus |
3R | 8825633..8826588 | 817..1772 | 100 | -> | Plus |
3R | 8826643..8827269 | 1773..2399 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8824452..8824608 | 1..157 | 100 | -> | Plus |
3R | 8824688..8824889 | 158..359 | 100 | -> | Plus |
3R | 8824952..8825408 | 360..816 | 100 | -> | Plus |
3R | 8825633..8826588 | 817..1772 | 100 | -> | Plus |
3R | 8826643..8827269 | 1773..2399 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8824452..8824608 | 1..157 | 100 | -> | Plus |
3R | 8824688..8824889 | 158..359 | 100 | -> | Plus |
3R | 8824952..8825408 | 360..816 | 100 | -> | Plus |
3R | 8825633..8826588 | 817..1772 | 100 | -> | Plus |
3R | 8826643..8827269 | 1773..2399 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 4650674..4651130 | 360..816 | 100 | -> | Plus |
arm_3R | 4650174..4650330 | 1..157 | 100 | -> | Plus |
arm_3R | 4650410..4650611 | 158..359 | 100 | -> | Plus |
arm_3R | 4651355..4652310 | 817..1772 | 100 | -> | Plus |
arm_3R | 4652365..4652991 | 1773..2399 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8565519..8565720 | 158..359 | 100 | -> | Plus |
3R | 8565783..8566239 | 360..816 | 100 | -> | Plus |
3R | 8566464..8567419 | 817..1772 | 100 | -> | Plus |
3R | 8567474..8568100 | 1773..2399 | 100 | Plus | |
3R | 8565283..8565439 | 1..157 | 100 | -> | Plus |
Translation from 103 to 2226
> LD33793.pep MTSRKRSGSGSTKRPKEKVVYIYELLCRGEDPSSESPEFWNEFFLLQPNF EALENEIGKLNNEQLQLVKPNLNTLFQRCIEMLDTEDHPKRLCNSLHTLC SLFYGIFKKSNAEPTLNILNEIFGHEKMDEWLKLLMQYCNRILLGDVPEN ARFMCLKLLQVLVTGTDNVNQNALFEHLMMHSMFDAFVRLLSDPTFRSQH GHDIVILLTILVNYRKHEATNPYVVQLSILADELALNGYGQMISQSLIDF CRQYIQSLNNVQSSSWFSSLSNIVGNMFVSDEGCERVQQIKANNGLLLAL YEAVHLNRNFITTLAHTQAESSAPPSPSNTLSLAQPVPDLSNAPIIDITQ YPTNLLVAVFQYCSIVMQDNKNESSIANLKLCFLILTCISEDQYANSMMH DSNLTFKVMLHRAQMRHRKLNVDRVGKSQPLAATLLDLLVEFIVSHLMKK FPMELYLLCIGVIHRILCYQKRCRVRLNYPWKELWSALIGLLRFLVNQEQ TLVKKCNIFHLSLQVVNIFNLFITYGDTFLATTNSYDELYYELNREEKVF TEIHAMVLRYTTMPDCEYKDDVIKLLNALVNILAIVKHFQNKIKEWLAEQ GLSTPTEEQILDVVRKNYDLTLKLQDSLDQYERYTETPLHTNFFKLMVRD VVNDTRKHIYGYVKEAVSVIPDQEILLSSSMTSVSAGTATPASATAVPEA KALPSFA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17691-PA | 704 | GF17691-PA | 12..676 | 12..677 | 3448 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13434-PA | 707 | GG13434-PA | 1..707 | 1..707 | 3773 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23943-PA | 705 | GH23943-PA | 1..678 | 1..677 | 3341 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8379-PB | 707 | CG8379-PB | 1..707 | 1..707 | 3660 | 100 | Plus |
CG8379-PA | 706 | CG8379-PA | 1..706 | 1..707 | 3643 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10054-PA | 693 | GI10054-PA | 1..678 | 1..677 | 3367 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21552-PA | 719 | GL21552-PA | 1..684 | 1..684 | 3462 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21032-PA | 719 | GA21032-PA | 1..681 | 1..683 | 3466 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23769-PA | 707 | GM23769-PA | 1..707 | 1..707 | 3776 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18579-PA | 706 | GD18579-PA | 1..706 | 1..707 | 3532 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23789-PA | 693 | GJ23789-PA | 1..693 | 1..695 | 3362 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11970-PA | 720 | GK11970-PA | 1..690 | 1..692 | 3429 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25913-PA | 707 | GE25913-PA | 1..707 | 1..707 | 3776 | 99.2 | Plus |
Translation from 103 to 2226
> LD33793.hyp MTSRKRSGSGSTKRPKEKVVYIYELLCRGEDPSSESPEFWNEFFLLQPNF EALENEIGKLNNEQLQLVKPNLNTLFQRCIEMLDTEDHPKRLCNSLHTLC SLFYGIFKKSNAEPTLNILNEIFGHEKMDEWLKLLMQYCNRILLGDVPEN ARFMCLKLLQVLVTGTDNVNQNALFEHLMMHSMFDAFVRLLSDPTFRSQH GHDIVILLTILVNYRKHEATNPYVVQLSILADELALNGYGQMISQSLIDF CRQYIQSLNNVQSSSWFSSLSNIVGNMFVSDEGCERVQQIKANNGLLLAL YEAVHLNRNFITTLAHTQAESSAPPSPSNTLSLAQPVPDLSNAPIIDITQ YPTNLLVAVFQYCSIVMQDNKNESSIANLKLCFLILTCISEDQYANSMMH DSNLTFKVMLHRAQMRHRKLNVDRVGKSQPLAATLLDLLVEFIVSHLMKK FPMELYLLCIGVIHRILCYQKRCRVRLNYPWKELWSALIGLLRFLVNQEQ TLVKKCNIFHLSLQVVNIFNLFITYGDTFLATTNSYDELYYELNREEKVF TEIHAMVLRYTTMPDCEYKDDVIKLLNALVNILAIVKHFQNKIKEWLAEQ GLSTPTEEQILDVVRKNYDLTLKLQDSLDQYERYTETPLHTNFFKLMVRD VVNDTRKHIYGYVKEAVSVIPDQEILLSSSMTSVSAGTATPASATAVPEA KALPSFA*