LD33831.complete Sequence
1485 bp (1485 high quality bases) assembled on 2004-06-20
GenBank Submission: BT015266
> LD33831.complete
TCAAAATTAAAGATTGGAAACATTGGTTGAAATGGCGTCCGCAGGAAAGA
AGGGCAAAAAGAATAAAGGAACAGTTATCTCCTTGCAATCATTTCTATGT
AATTCTGACGCTCCAGTCGGAACAACCCAAGTCTCAAAAAAAATACGAAA
TTTAGATGGCGATGATAGCGATGATGGAAGTGGTACATTGCCGTTGGTTT
ATCAGCTTCCAACCGCTCCGAGGGCAAATCGGATATTCGACGATAATTCT
ATTCCTCATAAAGCCCCATTTATTGCTTATATCAATAATTTACCATTTGA
CGCAAATGAAGATGACCTCTACGAGTTCTTTGAAGGTATTAATTTAATAT
CTCTGAGACTACCAAGAGAAGATGGCGAAAATGGTCGTTCCAGAGGCTTT
GGCTATGTGGAGTTGGAAAATCGAGAGGATTTAATTCATGTACTTAGCTT
GCCAGACCCCTCTATTAAAGGTCGCCGCATTCGCATTGAGCTATCGAATG
AAAACGACCAGCAAAGCCGCCAAAAAAGTAATAGGCGGTTTGATGGTTTT
GGAAATAATGGAGATAATAGGGATTCCGGAAATTGGAGGCGAGACAGCCA
AAACAACGGCAGTAACTTTGGTTATTCTTCCAATTTTGAAAGAAGCTTTA
ATAGAGAGAGAAAATCTTTACCAGATAGAGATGATGTGAACACTCCTGGA
TCTTGGCGCACGAGCGCAAGGCCGCAATCTATTGATACTTCCCCTACACG
CAGAGAAGTTGAACAAGTATCTGAAAAATATCGCGAAGGTCGAGTCAAAA
TAGCAGACAGATATTCCCGAGAAGAGACATCCAAAGTTGAAGAAGAAAGG
CCAAAATTGAATTTAAAACCAAGAACTTTACCATTGCCAGATGTAAAGAC
AATTGAATTCGAAAAATGTGACGTTGATGAATTTAATTTGGATAAACAAG
GCGGAACTTCATCATTAAACGTGTTTGGGTCTGCAAAACCGGTAGATACA
GCAGCAAGGGAGTTGGAGATTGAGCAAAGATTGGCTCTCGCTCGAAAACA
GGATAAGGGGCGCAGAGAACAGGGTTTAAATGAAAAACTTGCCGAGCTCC
AGGTGGATAAAAATGATAATGAAAGTCTAAGTGCAACAGTTAGTTGGCGC
ACGAATCAGGACTACAAGGAAAGCGACAAAATTAATAAGTGTCCAGGTGA
AAAACAGCGGGACGAGGAAATCCATAGATTGAATCATGCCCGAGGCCAGT
TTAACAGGCCGGAACTTTTGAGAGAAAAACCTAATGCGAACGGAGAGAGC
AAACGAGATTGTCGCAATGACCGTTCTGTGTCGAAGAAAACTTCCCAGAA
TGATCTTGTTTTGCAATCATCTAATAAATATTCAGGACTCGACAATGAAG
GATCGGAATAATATATTTGTGTTTCTTAAAAATAAATAAAAATAAAGAAA
ATATATAAATCTATGACAAAAAAAAAAAAAAAAAA
LD33831.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 18:01:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eIF-4B-RB | 1640 | eIF-4B-RB | 78..1547 | 1..1470 | 7350 | 100 | Plus |
eIF-4B-RA | 1873 | eIF-4B-RA | 73..1270 | 1..1198 | 5990 | 100 | Plus |
eIF-4B.a | 1568 | eIF-4B.a | 67..1263 | 1..1197 | 5985 | 100 | Plus |
eIF-4B.a | 1568 | eIF-4B.a | 1260..1475 | 1255..1470 | 1080 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:02:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2RHet | 3288813 | chr2RHet | 2902154..2903310 | 42..1198 | 5785 | 100 | Plus |
chr2RHet | 3288813 | chr2RHet | 2917314..2917423 | 1358..1467 | 550 | 100 | Plus |
chr2RHet | 3288813 | chr2RHet | 2915486..2915589 | 1256..1359 | 520 | 100 | Plus |
chr2RHet | 3288813 | chr2RHet | 2912604..2912668 | 1194..1258 | 325 | 100 | Plus |
chr2RHet | 3288813 | chr2RHet | 2901858..2901902 | 1..45 | 225 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:28:07 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:02:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 27547693..27548849 | 1198..42 | 5785 | 100 | Minus |
3L | 28110227 | 3L | 27856782..27857938 | 1198..42 | 5785 | 100 | Minus |
3L | 28110227 | 3L | 27533577..27533689 | 1470..1358 | 565 | 100 | Minus |
3L | 28110227 | 3L | 27842666..27842778 | 1470..1358 | 565 | 100 | Minus |
3L | 28110227 | 3L | 27535414..27535517 | 1359..1256 | 520 | 100 | Minus |
3L | 28110227 | 3L | 27844503..27844606 | 1359..1256 | 520 | 100 | Minus |
3L | 28110227 | 3L | 27538335..27538399 | 1258..1194 | 325 | 100 | Minus |
3L | 28110227 | 3L | 27847424..27847488 | 1258..1194 | 325 | 100 | Minus |
3L | 28110227 | 3L | 27549101..27549145 | 45..1 | 225 | 100 | Minus |
3L | 28110227 | 3L | 27858190..27858234 | 45..1 | 225 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:49:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 27849882..27851038 | 1198..42 | 5785 | 100 | Minus |
3L | 28103327 | 3L | 27540793..27541949 | 1198..42 | 5785 | 100 | Minus |
3L | 28103327 | 3L | 27835766..27835878 | 1470..1358 | 565 | 100 | Minus |
3L | 28103327 | 3L | 27526677..27526789 | 1470..1358 | 565 | 100 | Minus |
3L | 28103327 | 3L | 27837603..27837706 | 1359..1256 | 520 | 100 | Minus |
3L | 28103327 | 3L | 27528514..27528617 | 1359..1256 | 520 | 100 | Minus |
3L | 28103327 | 3L | 27840524..27840588 | 1258..1194 | 325 | 100 | Minus |
3L | 28103327 | 3L | 27531435..27531499 | 1258..1194 | 325 | 100 | Minus |
3L | 28103327 | 3L | 27851290..27851334 | 45..1 | 225 | 100 | Minus |
3L | 28103327 | 3L | 27542201..27542245 | 45..1 | 225 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 22:02:09 has no hits.
LD33831.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:03:15 Download gff for
LD33831.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2RHet | 2901858..2901901 | 1..44 | 100 | -> | Plus |
chr2RHet | 2902157..2903308 | 45..1196 | 100 | -> | Plus |
chr2RHet | 2912607..2912667 | 1197..1257 | 100 | -> | Plus |
chr2RHet | 2915488..2915587 | 1258..1357 | 100 | -> | Plus |
chr2RHet | 2917314..2917381 | 1358..1425 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:44:58 Download gff for
LD33831.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-4B-RB | 1..1380 | 32..1411 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:36:01 Download gff for
LD33831.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-4B-RB | 1..1380 | 32..1411 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:08:17 Download gff for
LD33831.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-4B-RB | 1..1380 | 32..1411 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:19:53 Download gff for
LD33831.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-4B-RB | 1..1380 | 32..1411 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:37:33 Download gff for
LD33831.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-4B-RB | 1..1380 | 32..1411 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:44:57 Download gff for
LD33831.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-4B-RB | 44..1468 | 1..1425 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:36:01 Download gff for
LD33831.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-4B-RB | 44..1468 | 1..1425 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:08:17 Download gff for
LD33831.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-4B-RB | 38..1504 | 1..1467 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:19:53 Download gff for
LD33831.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-4B-RB | 44..1468 | 1..1425 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:37:33 Download gff for
LD33831.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-4B-RB | 38..1504 | 1..1467 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:03:15 Download gff for
LD33831.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 27535416..27535515 | 1258..1357 | 100 | <- | Minus |
3L | 27538336..27538396 | 1197..1257 | 100 | <- | Minus |
3L | 27533580..27533689 | 1358..1467 | 100 | <- | Minus |
3L | 27547695..27548846 | 45..1196 | 100 | <- | Minus |
3L | 27549102..27549145 | 1..44 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:03:15 Download gff for
LD33831.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 27535416..27535515 | 1258..1357 | 100 | <- | Minus |
3L | 27538336..27538396 | 1197..1257 | 100 | <- | Minus |
3L | 27533580..27533689 | 1358..1467 | 100 | <- | Minus |
3L | 27547695..27548846 | 45..1196 | 100 | <- | Minus |
3L | 27549102..27549145 | 1..44 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:03:15 Download gff for
LD33831.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 27535416..27535515 | 1258..1357 | 100 | <- | Minus |
3L | 27538336..27538396 | 1197..1257 | 100 | <- | Minus |
3L | 27533580..27533689 | 1358..1467 | 100 | <- | Minus |
3L | 27547695..27548846 | 45..1196 | 100 | <- | Minus |
3L | 27549102..27549145 | 1..44 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:08:17 Download gff for
LD33831.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2RHet | 2901795..2901838 | 1..44 | 100 | -> | Plus |
2RHet | 2902094..2903245 | 45..1196 | 100 | -> | Plus |
2RHet | 2912544..2912604 | 1197..1257 | 100 | -> | Plus |
2RHet | 2915425..2915524 | 1258..1357 | 100 | -> | Plus |
2RHet | 2917251..2917360 | 1358..1467 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:57:08 Download gff for
LD33831.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 27540795..27541946 | 45..1196 | 100 | <- | Minus |
3L | 27542202..27542245 | 1..44 | 100 | | Minus |
3L | 27526680..27526789 | 1358..1467 | 100 | <- | Minus |
3L | 27528516..27528615 | 1258..1357 | 100 | <- | Minus |
3L | 27531436..27531496 | 1197..1257 | 100 | <- | Minus |
LD33831.hyp Sequence
Translation from 31 to 1410
> LD33831.hyp
MASAGKKGKKNKGTVISLQSFLCNSDAPVGTTQVSKKIRNLDGDDSDDGS
GTLPLVYQLPTAPRANRIFDDNSIPHKAPFIAYINNLPFDANEDDLYEFF
EGINLISLRLPREDGENGRSRGFGYVELENREDLIHVLSLPDPSIKGRRI
RIELSNENDQQSRQKSNRRFDGFGNNGDNRDSGNWRRDSQNNGSNFGYSS
NFERSFNRERKSLPDRDDVNTPGSWRTSARPQSIDTSPTRREVEQVSEKY
REGRVKIADRYSREETSKVEEERPKLNLKPRTLPLPDVKTIEFEKCDVDE
FNLDKQGGTSSLNVFGSAKPVDTAARELEIEQRLALARKQDKGRREQGLN
EKLAELQVDKNDNESLSATVSWRTNQDYKESDKINKCPGEKQRDEEIHRL
NHARGQFNRPELLREKPNANGESKRDCRNDRSVSKKTSQNDLVLQSSNKY
SGLDNEGSE*
LD33831.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:56:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eIF-4B-PB | 459 | CG10837-PB | 1..459 | 1..459 | 2393 | 100 | Plus |
eIF-4B-PA | 390 | CG10837-PA | 1..389 | 1..389 | 2028 | 100 | Plus |
eIF-4B-PF | 392 | CG10837-PF | 1..389 | 1..389 | 2028 | 100 | Plus |
eIF-4B-PE | 389 | CG10837-PE | 1..388 | 1..388 | 2022 | 100 | Plus |
LD33831.pep Sequence
Translation from 31 to 1410
> LD33831.pep
MASAGKKGKKNKGTVISLQSFLCNSDAPVGTTQVSKKIRNLDGDDSDDGS
GTLPLVYQLPTAPRANRIFDDNSIPHKAPFIAYINNLPFDANEDDLYEFF
EGINLISLRLPREDGENGRSRGFGYVELENREDLIHVLSLPDPSIKGRRI
RIELSNENDQQSRQKSNRRFDGFGNNGDNRDSGNWRRDSQNNGSNFGYSS
NFERSFNRERKSLPDRDDVNTPGSWRTSARPQSIDTSPTRREVEQVSEKY
REGRVKIADRYSREETSKVEEERPKLNLKPRTLPLPDVKTIEFEKCDVDE
FNLDKQGGTSSLNVFGSAKPVDTAARELEIEQRLALARKQDKGRREQGLN
EKLAELQVDKNDNESLSATVSWRTNQDYKESDKINKCPGEKQRDEEIHRL
NHARGQFNRPELLREKPNANGESKRDCRNDRSVSKKTSQNDLVLQSSNKY
SGLDNEGSE*
LD33831.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:12:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG10934-PA | 387 | GG10934-PA | 1..387 | 79..459 | 1624 | 86.2 | Plus |
Dere\GG15497-PA | 280 | GG15497-PA | 76..169 | 74..173 | 155 | 31 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:12:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH18041-PA | 405 | GH18041-PA | 1..403 | 1..391 | 1205 | 68 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:09:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eIF4B-PB | 459 | CG10837-PB | 1..459 | 1..459 | 2393 | 100 | Plus |
eIF4B-PF | 392 | CG10837-PF | 1..389 | 1..389 | 2028 | 100 | Plus |
eIF4B-PA | 390 | CG10837-PA | 1..389 | 1..389 | 2028 | 100 | Plus |
eIF4B-PE | 389 | CG10837-PE | 1..388 | 1..388 | 2022 | 100 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:12:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI23629-PA | 184 | GI23629-PA | 2..184 | 274..459 | 304 | 43.1 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:12:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE18125-PA | 461 | GE18125-PA | 10..461 | 14..459 | 2007 | 87.3 | Plus |
Dyak\GE21806-PA | 281 | GE21806-PA | 76..154 | 74..155 | 148 | 32.9 | Plus |