BDGP Sequence Production Resources |
Search the DGRC for LD33852
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 338 |
Well: | 52 |
Vector: | pOT2 |
Associated Gene/Transcript | mdy-RA |
Protein status: | LD33852.pep: gold |
Preliminary Size: | 2170 |
Sequenced Size: | 2074 |
Gene | Date | Evidence |
---|---|---|
CG13273 | 2001-01-01 | Release 2 assignment |
CG31991 | 2001-07-04 | Blastp of sequenced clone |
CG31991 | 2003-01-01 | Sim4 clustering to Release 3 |
mdy | 2008-04-29 | Release 5.5 accounting |
mdy | 2008-08-15 | Release 5.9 accounting |
mdy | 2008-12-18 | 5.12 accounting |
2074 bp (2074 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051835
> LD33852.complete TTTACGGTAAAAAGAGGCCGCTTCCAGTACGTGAAAATAAGTCTGCTCTT GTTGAAAGAAACAACAAAAACTTGCCAATTGGATTAAATTGTGTGCAAGA GACCATCACCATGACCACCAATAAGGATCCCCAAGATAAGGAGCCCGGGA AAGCAGAACAACCGACCAAGAATAGCGGATCCAGCGGTGTGGGTATCATG AAGCGCTTGAGAAGATCGGCGTCCGCCACAGAGCATAATCTTAGCAGTCT GCGAAACCGCAAGTCAACACAAAATCTATTCGATCAGCACGGGAATCCCA TAGATCTGCGACAGTATCGTAAAGTTTTGGATAAGGATGAAAATGGTAAT GGAACCAACGGATCCGAGAAGAAGCTTAGATACAGGAGAACACAAAGTGT GACTCGTGCTGAGGAGATTTCCAATAAAGAGGAGAAGCAGAGAAGAGCTC AGCCTGGCAGACCAATCCATCGGCCAAGAGATTCTCTGTTTTCTTGGAGC TCTGGATTTACCAATTTTTCTGGACTGGTGAACTGGGGATTTCTACTGCT CTGCATTGGAGGTCTGCGTTTGGGCTTGGAGAATCTCCTAAAGTATGGCA TTCGCATCAATCCACTGGATTGGTTCTTCTTCATAAGCGGACACAACGAA GGCGAAGGACATAACGCCCTAATCCTGAGCATTTACTCTTTAGTGCATAT CTCGCTCTGTTTGGCTGTGGAGAAGGGTCTAGCCATGGAAATAATTGCAG AGGGCTTGGGCTTGTTCATCCAGATAGTGAACATTGTTGTCTTGGTTTGC CTACCGGTGGTAACAATTCACCTAAAAGGACATGCTTTTAGTTTGATGGG CGCTTCAACAGTTTGCTTCTTTTACTCTGTGTTGTTCCTAAAACTATGGT CCTATGTGCAGACGAATATGTGGTGCCGTCAGACTTATTATCAAAAGAAT CCGCGGGAGCGTCGACCAAGCATAACTTTGGCGGAACTAAAAAAAGGAGT TTTGAATGGAGGTGAAGAAGACGAGGACGTTTCCAAGCTGGTGCAATATC CTGATAATCTCACATACAAGGATCTCCTGTACTTCCTTTGCGCGCCCACT CTCTGCTATGAGTTGAATTTCCCGCGAACTTCTCGCGTGCGCAAACGCTT TTTGCTGAAGCGTTTATTGGAGGTGGTGATTGGAGTGAATGTGGTTATGG CCTTGTTTCAACAATGGATCATTCCATCGGTTCGGAACTCCCTGATTCCG TTCTCCAATATGGACGTGGCCTTAGCCACTGAGCGACTTCTTAAACTTGC GCTACCCAATCATCTTTGCTGGCTCTGCTTTTTCTATCTAATGTTCCACT CTTTTCTTAATGCGGTCGGCGAACTGCTGAATTTTGCAGATCGCAATTTT TATTGTGATTGGTGGAATGCGAATAACATTGACACCTTCTGGCGTACATG GAACATGCCAGTTCATAGGTGGTGCGTGCGTCATCTCTACATCCCTGTGG TCCAAATGGGATATTCCTCAAGACAGGCCTCTACTATTGTCTTTCTTTTC AGTGCCGTCTTCCATGAATATTTGGTTTCAGTTCCTTTGCAAATATACAA GATCTGGGCATTTATGGGCATGATGGGTCAGATTCCCCTATCGGCCATAT CCAAATCCATTGAAAAGAAACTGGGTCCCCGAATGGGCAATATAATCGTG TGGGCTTCCATTATTCTTGGTCAGCCTCTGTGCATAATGGCCTATTATCA CGATTATGTCGTCCAGCATTTCAAAAACTCGCTCAACGGCACCGACTACA GTAGTTAGGTTTCAAAAAAGGTTAACATTTAAAAATGGAGCAACACTGAA ATATCTGCATCGGTCGGGTCCGTGTACTTTTCGTAATTTATAAGCCAGAA TGCAAGTTAAGAAGGAAACTTGTGATTGCCAATTTACAAAGCATATTTTG TATGACTTTTGCACATGCATGTAGTACTGATTAACACAAATAGATTGTTA TTGAATGCATTTGTTAATGAATTTAAGTGTCATGTAAATAAATCAAATTT TAAACTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mdy-RA | 2133 | mdy-RA | 51..2114 | 1..2064 | 10305 | 99.9 | Plus |
mdy-RC | 2360 | mdy-RC | 376..2341 | 99..2064 | 9815 | 99.9 | Plus |
mdy-RD | 2336 | mdy-RD | 353..2317 | 100..2064 | 9810 | 99.9 | Plus |
mdy-RC | 2360 | mdy-RC | 31..129 | 1..99 | 495 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 16825173..16825655 | 1574..2056 | 2415 | 100 | Plus |
chr2L | 23010047 | chr2L | 16818801..16819166 | 98..463 | 1830 | 100 | Plus |
chr2L | 23010047 | chr2L | 16824470..16824780 | 991..1301 | 1555 | 100 | Plus |
chr2L | 23010047 | chr2L | 16824840..16825115 | 1301..1576 | 1380 | 100 | Plus |
chr2L | 23010047 | chr2L | 16824270..16824413 | 847..990 | 720 | 100 | Plus |
chr2L | 23010047 | chr2L | 16819222..16819353 | 464..595 | 660 | 100 | Plus |
chr2L | 23010047 | chr2L | 16824100..16824209 | 737..846 | 550 | 100 | Plus |
chr2L | 23010047 | chr2L | 16815385..16815483 | 1..99 | 495 | 100 | Plus |
chr2L | 23010047 | chr2L | 16819409..16819500 | 593..684 | 460 | 100 | Plus |
chr2L | 23010047 | chr2L | 16819569..16819622 | 685..738 | 270 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 16826482..16826972 | 1574..2064 | 2440 | 99.8 | Plus |
2L | 23513712 | 2L | 16820110..16820475 | 98..463 | 1830 | 100 | Plus |
2L | 23513712 | 2L | 16825779..16826089 | 991..1301 | 1555 | 100 | Plus |
2L | 23513712 | 2L | 16826149..16826424 | 1301..1576 | 1380 | 100 | Plus |
2L | 23513712 | 2L | 16825579..16825722 | 847..990 | 720 | 100 | Plus |
2L | 23513712 | 2L | 16820531..16820662 | 464..595 | 660 | 100 | Plus |
2L | 23513712 | 2L | 16825409..16825518 | 737..846 | 550 | 100 | Plus |
2L | 23513712 | 2L | 16816694..16816792 | 1..99 | 495 | 100 | Plus |
2L | 23513712 | 2L | 16820718..16820809 | 593..684 | 460 | 100 | Plus |
2L | 23513712 | 2L | 16820878..16820931 | 685..738 | 270 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 16826482..16826972 | 1574..2064 | 2440 | 99.7 | Plus |
2L | 23513712 | 2L | 16820110..16820475 | 98..463 | 1830 | 100 | Plus |
2L | 23513712 | 2L | 16825779..16826089 | 991..1301 | 1555 | 100 | Plus |
2L | 23513712 | 2L | 16826149..16826424 | 1301..1576 | 1380 | 100 | Plus |
2L | 23513712 | 2L | 16825579..16825722 | 847..990 | 720 | 100 | Plus |
2L | 23513712 | 2L | 16820531..16820662 | 464..595 | 660 | 100 | Plus |
2L | 23513712 | 2L | 16825409..16825518 | 737..846 | 550 | 100 | Plus |
2L | 23513712 | 2L | 16816694..16816792 | 1..99 | 495 | 100 | Plus |
2L | 23513712 | 2L | 16820718..16820809 | 593..684 | 460 | 100 | Plus |
2L | 23513712 | 2L | 16820878..16820931 | 685..738 | 270 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 16815385..16815483 | 1..99 | 100 | -> | Plus |
chr2L | 16818803..16819166 | 100..463 | 100 | -> | Plus |
chr2L | 16819222..16819350 | 464..592 | 100 | -> | Plus |
chr2L | 16819409..16819500 | 593..684 | 100 | -> | Plus |
chr2L | 16819569..16819621 | 685..737 | 100 | -> | Plus |
chr2L | 16824101..16824209 | 738..846 | 100 | -> | Plus |
chr2L | 16824270..16824413 | 847..990 | 100 | -> | Plus |
chr2L | 16824470..16824780 | 991..1301 | 100 | -> | Plus |
chr2L | 16824841..16825113 | 1302..1574 | 100 | -> | Plus |
chr2L | 16825174..16825627 | 1575..2028 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mdy-RD | 140..1848 | 100..1808 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mdy-RD | 140..1848 | 100..1808 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mdy-RD | 140..1848 | 100..1808 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mdy-RD | 140..1848 | 100..1808 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mdy-RB | 1..1698 | 111..1808 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mdy-RA | 30..2085 | 1..2056 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mdy-RA | 30..2085 | 1..2056 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mdy-RA | 35..2090 | 1..2056 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mdy-RA | 30..2085 | 1..2056 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mdy-RA | 35..2090 | 1..2056 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16825779..16826089 | 991..1301 | 100 | -> | Plus |
2L | 16820878..16820930 | 685..737 | 100 | -> | Plus |
2L | 16825410..16825518 | 738..846 | 100 | -> | Plus |
2L | 16825579..16825722 | 847..990 | 100 | -> | Plus |
2L | 16816694..16816792 | 1..99 | 100 | -> | Plus |
2L | 16820112..16820475 | 100..463 | 100 | -> | Plus |
2L | 16820531..16820659 | 464..592 | 100 | -> | Plus |
2L | 16820718..16820809 | 593..684 | 100 | -> | Plus |
2L | 16826150..16826422 | 1302..1574 | 100 | -> | Plus |
2L | 16826483..16826964 | 1575..2056 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16825779..16826089 | 991..1301 | 100 | -> | Plus |
2L | 16820878..16820930 | 685..737 | 100 | -> | Plus |
2L | 16825410..16825518 | 738..846 | 100 | -> | Plus |
2L | 16825579..16825722 | 847..990 | 100 | -> | Plus |
2L | 16816694..16816792 | 1..99 | 100 | -> | Plus |
2L | 16820112..16820475 | 100..463 | 100 | -> | Plus |
2L | 16820531..16820659 | 464..592 | 100 | -> | Plus |
2L | 16820718..16820809 | 593..684 | 100 | -> | Plus |
2L | 16826150..16826422 | 1302..1574 | 100 | -> | Plus |
2L | 16826483..16826964 | 1575..2056 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16825779..16826089 | 991..1301 | 100 | -> | Plus |
2L | 16820878..16820930 | 685..737 | 100 | -> | Plus |
2L | 16825410..16825518 | 738..846 | 100 | -> | Plus |
2L | 16825579..16825722 | 847..990 | 100 | -> | Plus |
2L | 16816694..16816792 | 1..99 | 100 | -> | Plus |
2L | 16820112..16820475 | 100..463 | 100 | -> | Plus |
2L | 16820531..16820659 | 464..592 | 100 | -> | Plus |
2L | 16820718..16820809 | 593..684 | 100 | -> | Plus |
2L | 16826150..16826422 | 1302..1574 | 100 | -> | Plus |
2L | 16826483..16826964 | 1575..2056 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 16820878..16820930 | 685..737 | 100 | -> | Plus |
arm_2L | 16825410..16825518 | 738..846 | 100 | -> | Plus |
arm_2L | 16825579..16825722 | 847..990 | 100 | -> | Plus |
arm_2L | 16816694..16816792 | 1..99 | 100 | -> | Plus |
arm_2L | 16820112..16820475 | 100..463 | 100 | -> | Plus |
arm_2L | 16820531..16820659 | 464..592 | 100 | -> | Plus |
arm_2L | 16820718..16820809 | 593..684 | 100 | -> | Plus |
arm_2L | 16825779..16826089 | 991..1301 | 100 | -> | Plus |
arm_2L | 16826150..16826422 | 1302..1574 | 100 | -> | Plus |
arm_2L | 16826483..16826964 | 1575..2056 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16816694..16816792 | 1..99 | 100 | -> | Plus |
2L | 16820112..16820475 | 100..463 | 100 | -> | Plus |
2L | 16820531..16820659 | 464..592 | 100 | -> | Plus |
2L | 16820718..16820809 | 593..684 | 100 | -> | Plus |
2L | 16820878..16820930 | 685..737 | 100 | -> | Plus |
2L | 16825410..16825518 | 738..846 | 100 | -> | Plus |
2L | 16825579..16825722 | 847..990 | 100 | -> | Plus |
2L | 16825779..16826089 | 991..1301 | 100 | -> | Plus |
2L | 16826150..16826422 | 1302..1574 | 100 | -> | Plus |
2L | 16826483..16826964 | 1575..2056 | 100 | Plus |
Translation from 2 to 1807
> LD33852.hyp YGKKRPLPVRENKSALVERNNKNLPIGLNCVQETITMTTNKDPQDKEPGK AEQPTKNSGSSGVGIMKRLRRSASATEHNLSSLRNRKSTQNLFDQHGNPI DLRQYRKVLDKDENGNGTNGSEKKLRYRRTQSVTRAEEISNKEEKQRRAQ PGRPIHRPRDSLFSWSSGFTNFSGLVNWGFLLLCIGGLRLGLENLLKYGI RINPLDWFFFISGHNEGEGHNALILSIYSLVHISLCLAVEKGLAMEIIAE GLGLFIQIVNIVVLVCLPVVTIHLKGHAFSLMGASTVCFFYSVLFLKLWS YVQTNMWCRQTYYQKNPRERRPSITLAELKKGVLNGGEEDEDVSKLVQYP DNLTYKDLLYFLCAPTLCYELNFPRTSRVRKRFLLKRLLEVVIGVNVVMA LFQQWIIPSVRNSLIPFSNMDVALATERLLKLALPNHLCWLCFFYLMFHS FLNAVGELLNFADRNFYCDWWNANNIDTFWRTWNMPVHRWCVRHLYIPVV QMGYSSRQASTIVFLFSAVFHEYLVSVPLQIYKIWAFMGMMGQIPLSAIS KSIEKKLGPRMGNIIVWASIILGQPLCIMAYYHDYVVQHFKNSLNGTDYS S*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mdy-PE | 565 | CG31991-PE | 1..565 | 37..601 | 3001 | 100 | Plus |
mdy-PC | 565 | CG31991-PC | 1..565 | 37..601 | 3001 | 100 | Plus |
mdy-PB | 565 | CG31991-PB | 1..565 | 37..601 | 3001 | 100 | Plus |
mdy-PA | 565 | CG31991-PA | 1..565 | 37..601 | 3001 | 100 | Plus |
CG8112-PB | 559 | CG8112-PB | 281..529 | 333..581 | 350 | 35.8 | Plus |
Translation from 110 to 1807
> LD33852.pep MTTNKDPQDKEPGKAEQPTKNSGSSGVGIMKRLRRSASATEHNLSSLRNR KSTQNLFDQHGNPIDLRQYRKVLDKDENGNGTNGSEKKLRYRRTQSVTRA EEISNKEEKQRRAQPGRPIHRPRDSLFSWSSGFTNFSGLVNWGFLLLCIG GLRLGLENLLKYGIRINPLDWFFFISGHNEGEGHNALILSIYSLVHISLC LAVEKGLAMEIIAEGLGLFIQIVNIVVLVCLPVVTIHLKGHAFSLMGAST VCFFYSVLFLKLWSYVQTNMWCRQTYYQKNPRERRPSITLAELKKGVLNG GEEDEDVSKLVQYPDNLTYKDLLYFLCAPTLCYELNFPRTSRVRKRFLLK RLLEVVIGVNVVMALFQQWIIPSVRNSLIPFSNMDVALATERLLKLALPN HLCWLCFFYLMFHSFLNAVGELLNFADRNFYCDWWNANNIDTFWRTWNMP VHRWCVRHLYIPVVQMGYSSRQASTIVFLFSAVFHEYLVSVPLQIYKIWA FMGMMGQIPLSAISKSIEKKLGPRMGNIIVWASIILGQPLCIMAYYHDYV VQHFKNSLNGTDYSS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15369-PA | 570 | GF15369-PA | 1..562 | 1..565 | 2828 | 92.7 | Plus |
Dana\GF18181-PA | 555 | GF18181-PA | 307..532 | 324..552 | 312 | 35.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22776-PA | 611 | GG22776-PA | 47..611 | 1..565 | 3014 | 99.1 | Plus |
Dere\GG12153-PA | 557 | GG12153-PA | 279..527 | 297..545 | 315 | 35.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13104-PA | 565 | GH13104-PA | 1..564 | 1..565 | 2549 | 80.8 | Plus |
Dgri\GH18571-PA | 567 | GH18571-PA | 298..541 | 303..549 | 327 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mdy-PE | 565 | CG31991-PE | 1..565 | 1..565 | 3001 | 100 | Plus |
mdy-PC | 565 | CG31991-PC | 1..565 | 1..565 | 3001 | 100 | Plus |
mdy-PB | 565 | CG31991-PB | 1..565 | 1..565 | 3001 | 100 | Plus |
mdy-PA | 565 | CG31991-PA | 1..565 | 1..565 | 3001 | 100 | Plus |
CG8112-PB | 559 | CG8112-PB | 281..529 | 297..545 | 350 | 35.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14192-PA | 561 | GI14192-PA | 1..560 | 1..563 | 2553 | 83.1 | Plus |
Dmoj\GI24769-PA | 569 | GI24769-PA | 293..543 | 297..549 | 326 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18793-PA | 558 | GL18793-PA | 1..558 | 1..565 | 2769 | 90.6 | Plus |
Dper\GL12471-PA | 563 | GL12471-PA | 286..540 | 297..552 | 328 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16599-PA | 558 | GA16599-PA | 1..558 | 1..565 | 2769 | 90.6 | Plus |
Dpse\GA20833-PA | 565 | GA20833-PA | 288..542 | 297..552 | 328 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17212-PA | 607 | GM17212-PA | 43..607 | 1..565 | 3012 | 98.9 | Plus |
Dsec\GM23753-PA | 558 | GM23753-PA | 310..528 | 324..545 | 307 | 37.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24087-PA | 161 | GD24087-PA | 85..161 | 489..565 | 408 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17509-PA | 565 | GJ17509-PA | 1..565 | 1..564 | 2649 | 84.7 | Plus |
Dvir\GJ22674-PA | 574 | GJ22674-PA | 300..551 | 297..552 | 305 | 32.3 | Plus |