BDGP Sequence Production Resources |
Search the DGRC for LD33880
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 338 |
Well: | 80 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6388-RA |
Protein status: | LD33880.pep: gold |
Preliminary Size: | 2040 |
Sequenced Size: | 1814 |
Gene | Date | Evidence |
---|---|---|
CG6388 | 2001-01-01 | Release 2 assignment |
CG6388 | 2001-07-04 | Blastp of sequenced clone |
CG6388 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6388 | 2008-04-29 | Release 5.5 accounting |
CG6388 | 2008-08-15 | Release 5.9 accounting |
CG6388 | 2008-12-18 | 5.12 accounting |
1814 bp (1814 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051836
> LD33880.complete CTCATCCAAATGGAAGTGGACGAGGAAAAGCCGCAGATTATTGCTGAAAA TCCCAACGAAAACGTGATACGCGAACGTAATGCGGAGATCGTTTCCGGCG GCAATGTGTTCTACAATCCTGTCCAGGAATTCAATCGAGATCTGAGCATT GCTGCTCTGAATGTTTATCGACAGAGATTGACCAAGGAGCGGAGCGAAAA GGCGCTCAAAAAGCAGCGGAAGAAGGTCAAGGAACAGGAGGATGAGAAGA CCACTCCCGTTCCCGAGGATCCACCTGTTTATGAGGCCGGTACTCGATAT GAGGATGGACTTCGGATCCTGGAGGCACTGGCAGCCACCGGTTTGCGTAG CATCCGTTACGCGCAGGAAATCGCCGGTGTACGCCAGATCGTGGCCAACG ATCTTTCCCGCCAGGCAGTGGCCTCGATCAACACAAACATCCGGCACAAC AAGGTGGAGGAGCTGATCGAGCCCAGTCACTCCGATGCAATGACCCTCAT GTATCTTTCGACGCAACCCGAGAAGCGTTTTGATGCAGTTGACTTGGATC CGTACGGATGTCCCAATCGCTTTTTGGATGGCGCTATGCAGTGCCTGGTG GACGGCGGCCTGCTGCTGGTGACAGCCACCGACATGGCCGTGCTGGCCGG AAATGCTCCGGAAGCTTGCTATGTAAAATACGGATCGGTTCCGCTGCGGA TGAAGTGCTGTCACGAGATGGCATTGCGCATTTTGCTGCACTGCATCGAG AGCCACGCGAACAGGTACGGCAAGTACATCGAACCACTACTGAGCATATC AGCGGACTTTTACATCCGGATATTTGTGCGTGTGTACGTCGGCCAGGCCC AATGCAAGCTGTCGATGAGCAAGCAGTCTTGGATATACCAATGCACCGGA TGTGAGACCTTCACGCTGCAGCCCTTGGGCATAACCAAGCCAAATCCCAC GGCTGGTAATCCCCAGCAGCTGAAGTTCGGAATTCCCACTGGTCCGGCGG TCAACTCGCAGTGCGAACATTGCGGTCACAGGCATCATCTGGGTGGACCC ATCTGGTCGGCACCGATTCATAACCCCGAATTTGTGCAGGATCTTTTAAC GGCGGTCCAGGAGACCACCTTGCAATCGCTGGGAACCCAGAGACGAATCG TTGGAGTTCTTTCCATGGTCCAAGAGGAGCTGCAGGATGTTCCCCTTTAC TACACGCCGGACAAACTGTGCTGTGTGCTCAAGCTAGAAATCGTGCCCAT GCTAAAGTTCCGGTCTGCTATTCTCCACGCTGGCTATCGAGTCTCATACT CGCATGCCTCGAAGAATTCGTTGAAAACCAATGCTCCACCAGCGGTGCTA TGGGACATTCTGCGCAGCTGGAGCAAGCGACATCCGGTAAATCCCGAAAG GATGATTCCTGGATCTCCACTGGCGGCCATACTTTCGAAAGAATGCACTG CTGTCTACGAGTTCGATGAACTCCATCCGGAGGCGAACCCGAAGAGTCGC AAATCGGCATTATCGCGCTTCCAAGAGAATCCGACTCCACATTGGGGACC TGGAACCAGAGCCACTATTATGATTGGTGACAACAAACTACCCAAGAGCT ATCGTAACCAGAACAAGAAACAGCGTCACAAAGCGTCGGAGCAACAGGCG GAGGATGACCAACAGGACACTCCACAAGCAGTGGATGAGTATGATGGAGA TGTGGAGCACCTGCCCAAGCAGCCCAAGCTGGAGGCGACTGCGTGACGAC TGCTTCTGTGTCCCAAATTTATTTCCAATAATGTTTGTAAAACCCAAAAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 12427284..12428364 | 492..1572 | 5405 | 100 | Plus |
chr2L | 23010047 | chr2L | 12426762..12427221 | 33..492 | 2300 | 100 | Plus |
chr2L | 23010047 | chr2L | 12428421..12428644 | 1572..1795 | 1120 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 12428661..12429741 | 492..1572 | 5405 | 100 | Plus |
2L | 23513712 | 2L | 12428139..12428598 | 33..492 | 2300 | 100 | Plus |
2L | 23513712 | 2L | 12429798..12430025 | 1572..1799 | 1140 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 12428661..12429741 | 492..1572 | 5405 | 100 | Plus |
2L | 23513712 | 2L | 12428139..12428598 | 33..492 | 2300 | 100 | Plus |
2L | 23513712 | 2L | 12429798..12430025 | 1572..1799 | 1140 | 100 | Plus |
2L | 23513712 | 2L | 12428048..12428083 | 1..36 | 180 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
G-element | 4346 | G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1). | 356..412 | 179..234 | 129 | 71.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 12426671..12426706 | 1..36 | 100 | -> | Plus |
chr2L | 12426766..12427220 | 37..491 | 100 | -> | Plus |
chr2L | 12427284..12428363 | 492..1571 | 100 | -> | Plus |
chr2L | 12428421..12428644 | 1572..1795 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6388-RA | 1..1737 | 10..1746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6388-RA | 1..1737 | 10..1746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6388-RA | 1..1737 | 10..1746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6388-RA | 1..1737 | 10..1746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6388-RA | 1..1737 | 10..1746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6388-RA | 17..1811 | 1..1795 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6388-RA | 17..1811 | 1..1795 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6388-RA | 21..1815 | 1..1795 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6388-RA | 17..1811 | 1..1795 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6388-RA | 21..1815 | 1..1795 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12428048..12428083 | 1..36 | 100 | -> | Plus |
2L | 12428143..12428597 | 37..491 | 100 | -> | Plus |
2L | 12428661..12429740 | 492..1571 | 100 | -> | Plus |
2L | 12429798..12430021 | 1572..1795 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12428048..12428083 | 1..36 | 100 | -> | Plus |
2L | 12428143..12428597 | 37..491 | 100 | -> | Plus |
2L | 12428661..12429740 | 492..1571 | 100 | -> | Plus |
2L | 12429798..12430021 | 1572..1795 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12428048..12428083 | 1..36 | 100 | -> | Plus |
2L | 12428143..12428597 | 37..491 | 100 | -> | Plus |
2L | 12428661..12429740 | 492..1571 | 100 | -> | Plus |
2L | 12429798..12430021 | 1572..1795 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 12428048..12428083 | 1..36 | 100 | -> | Plus |
arm_2L | 12428143..12428597 | 37..491 | 100 | -> | Plus |
arm_2L | 12428661..12429740 | 492..1571 | 100 | -> | Plus |
arm_2L | 12429798..12430021 | 1572..1795 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12428048..12428083 | 1..36 | 100 | -> | Plus |
2L | 12428143..12428597 | 37..491 | 100 | -> | Plus |
2L | 12428661..12429740 | 492..1571 | 100 | -> | Plus |
2L | 12429798..12430021 | 1572..1795 | 100 | Plus |
Translation from 0 to 1745
> LD33880.hyp LIQMEVDEEKPQIIAENPNENVIRERNAEIVSGGNVFYNPVQEFNRDLSI AALNVYRQRLTKERSEKALKKQRKKVKEQEDEKTTPVPEDPPVYEAGTRY EDGLRILEALAATGLRSIRYAQEIAGVRQIVANDLSRQAVASINTNIRHN KVEELIEPSHSDAMTLMYLSTQPEKRFDAVDLDPYGCPNRFLDGAMQCLV DGGLLLVTATDMAVLAGNAPEACYVKYGSVPLRMKCCHEMALRILLHCIE SHANRYGKYIEPLLSISADFYIRIFVRVYVGQAQCKLSMSKQSWIYQCTG CETFTLQPLGITKPNPTAGNPQQLKFGIPTGPAVNSQCEHCGHRHHLGGP IWSAPIHNPEFVQDLLTAVQETTLQSLGTQRRIVGVLSMVQEELQDVPLY YTPDKLCCVLKLEIVPMLKFRSAILHAGYRVSYSHASKNSLKTNAPPAVL WDILRSWSKRHPVNPERMIPGSPLAAILSKECTAVYEFDELHPEANPKSR KSALSRFQENPTPHWGPGTRATIMIGDNKLPKSYRNQNKKQRHKASEQQA EDDQQDTPQAVDEYDGDVEHLPKQPKLEATA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6388-PA | 578 | CG6388-PA | 1..578 | 4..581 | 3046 | 100 | Plus |
Translation from 9 to 1745
> LD33880.pep MEVDEEKPQIIAENPNENVIRERNAEIVSGGNVFYNPVQEFNRDLSIAAL NVYRQRLTKERSEKALKKQRKKVKEQEDEKTTPVPEDPPVYEAGTRYEDG LRILEALAATGLRSIRYAQEIAGVRQIVANDLSRQAVASINTNIRHNKVE ELIEPSHSDAMTLMYLSTQPEKRFDAVDLDPYGCPNRFLDGAMQCLVDGG LLLVTATDMAVLAGNAPEACYVKYGSVPLRMKCCHEMALRILLHCIESHA NRYGKYIEPLLSISADFYIRIFVRVYVGQAQCKLSMSKQSWIYQCTGCET FTLQPLGITKPNPTAGNPQQLKFGIPTGPAVNSQCEHCGHRHHLGGPIWS APIHNPEFVQDLLTAVQETTLQSLGTQRRIVGVLSMVQEELQDVPLYYTP DKLCCVLKLEIVPMLKFRSAILHAGYRVSYSHASKNSLKTNAPPAVLWDI LRSWSKRHPVNPERMIPGSPLAAILSKECTAVYEFDELHPEANPKSRKSA LSRFQENPTPHWGPGTRATIMIGDNKLPKSYRNQNKKQRHKASEQQAEDD QQDTPQAVDEYDGDVEHLPKQPKLEATA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14196-PA | 582 | GF14196-PA | 1..579 | 1..575 | 2559 | 82.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23784-PA | 579 | GG23784-PA | 1..579 | 1..578 | 2929 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10107-PA | 594 | GH10107-PA | 1..594 | 1..578 | 2331 | 75.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6388-PA | 578 | CG6388-PA | 1..578 | 1..578 | 3046 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14433-PA | 589 | GI14433-PA | 3..543 | 1..545 | 2311 | 79.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19347-PA | 586 | GL19347-PA | 1..586 | 1..578 | 2568 | 81.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19557-PA | 586 | GA19557-PA | 1..586 | 1..578 | 2545 | 81.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26818-PA | 578 | GM26818-PA | 1..578 | 1..578 | 3109 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23837-PA | 578 | GD23837-PA | 1..578 | 1..578 | 3091 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16265-PA | 431 | GJ16265-PA | 1..415 | 1..410 | 1676 | 76.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15497-PA | 571 | GK15497-PA | 13..546 | 4..541 | 2423 | 82.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18588-PA | 579 | GE18588-PA | 1..579 | 1..578 | 3002 | 96.2 | Plus |