![]() | BDGP Sequence Production Resources |
Search the DGRC for LD33980
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 339 |
Well: | 80 |
Vector: | pOT2 |
Associated Gene/Transcript | Nak-RB |
Protein status: | LD33980.pep: wuzgold |
Preliminary Size: | 1708 |
Sequenced Size: | 3308 |
Gene | Date | Evidence |
---|---|---|
CG10637 | 2001-01-01 | Release 2 assignment |
CG10637 | 2001-09-19 | Blastp of sequenced clone |
CG10637 | 2003-01-01 | Sim4 clustering to Release 3 |
Nak | 2008-04-29 | Release 5.5 accounting |
Nak | 2008-08-15 | Release 5.9 accounting |
Nak | 2008-12-18 | 5.12 accounting |
3308 bp (3308 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058640
> LD33980.complete TCAGTTTCTGGCTCCGTTTAACAATAACTTGGCTGCCATGGGCGACGGTC AGCAGACTTTGGCTAGTGCTGCCTCGAATCCCGGGATATATGCATCTTCA ACGGCAAACTCAGCCGCGGTATCCATTAGCGAATTAATGAAACCAGGACA AACGGCGGTGGAAAAGCGAGTTGAAGCCTGGAATCCGTTCGAAGAGGAGC AGCCTTTCAGCCAGATGACTGAGGATCACATCTTTGAGGCGGAGTTCGAC AAGATACGACAGAGAGGCAGTCAAGGAAGCATCACAGCAAAATCGGCATC CACAACTTCCACGCTAACACCAACGGAGCAGATTCCCTCTGCGGTTGTGG CTCCTGTTACAGCTGCTCCTGGTGCAGTGCCTCCTCCGCCGATTGCTGCC GCTGTGTCTCCTTACCCGTCGCAGGTCTCCGAGGATCCATTCGGATCGGC GCCATTCAGTTTGCCACCCGGACTGCGCGAGAAGGCGAGCTCGCTGCGCA AAACCGGAGCGAAATTCATCGGCGTTTCATCTGGTGGAACAGGAGGCGGA GTGGCCACGCCTATCGGCTTGGTAGCGGGAGGAGCAAACACCGCCACCTC TTCCAACTCATCCAAGTGGATGCTCTCCCCCACCCTGGAGGTTTCCAGCG AAGAGAAGACCTCGCTTATCAGTAAACTCAAAACAGACTCAGAATGTGGA ATTCCAGGCGCTGTTGGAGGAGCTGGAGAAGGTGTCTCTGGTTATGTTAA GCTACCTGTAGAAGATCGCAACAAGTACGAGAAGCTGCGCAGCAAAGATC AGCCGACTTCCGATGACTCCGATTCCGAGGCTTCGGAGTTCTTTCAACAA GACAGCGATGAAGGAGGTGGGGGCATCTTTAGGCAAATGCAGATGGTGAC AAGCAATTTGCCGGAAACCATCCATAAAATCCAACAGGTTGCCTATCACA AGGTGGACAAGACAGCTCATCTGCCAATTGTGAAGAAACTTCGCGATAAG ACCAAGAAACCCACAACAGCTGCCCATCAAGCGGCCCAACAACTAAATCT CATGGCTGCCGCGGTAGCTGCACAAGCTGAAGAAGCTGCCAAGGCGGCGG AATCCGACGGTGATTCGATCGGATCTGCCAGTGACCTGCGGGCAGAGGAT GATGATCTGTTTGACGAGAATCCTCGCCAGACACAAGCCAAGCAACGTCG TCCTCTGCCAACAGAAATGGATGGAATAAGCGAGTCAGTGAAGACCTGTA GCAGCTCTGCCTACCATGCAGAATGTGAAAGTGTGACCACCCATGAAGAC GATGTGCGTAGTCGGGTGGTGGTGAAGGTGCGGATGAGGAAGAAGGACCG TGCCCTTGTGACTGCCACTGGCGACCCAAGTGCTCCGTCTGAAGAACTAA GTCCCACTTCGAGCGATCTCTTGCACAAGTTCGGCGATCGTCCGTTGCTG CTAGATGATGAATTGGATTATGGTTCTGGAGAAAGCAAGAGTAGCACTGA ATCTCCTGTGGCTCCAATTCTGCCAACAAATCCCGATGTGCAGGAATCAG AGGAGGATGTGTTCGCCCTGGCTCCATTTAAATTACCAGTCGGAGTTCCT TTGAAACGAAAGACTAAACCCAAAGCTAAGCCCAAGCCTTCGGAACCCGA GATGTGGACTTCAACGCCAGTTAAAAGCGCCGCTGTCGGAGATCCTTCTA CCAACTTTGCCAGTTTTCCAGCGCAGCTCACGCCAACCAATAATGTGGGG AACTCTGCGCAGCTGGATGAGTTCAATGAGCCAATTTTCAATCCCTTCCA GGAAAACGCACAGAACACGCAATCAGGGGAAACTAATCAATGCGACCTGT TCGGCTTGGAACCATTTCCACAGGTAATTCGTACAATCGAACAGAACCCA CAGCACCACCAGATCCACCAATTTCCCAGCCACAACAACAATAACAATGT GATCAAAGTGCCCGCCTCCGTATCTGTTGCTCTTCCTGCCTCCGTTCCTG TATCTGTTTCCGTCAATTCGTCTGCCCCACAACTGGTGACCATAAATCAC TCGATTATTATCAACAAAACGCCGGAGCCACCGATGAACTATAATAATAA TAATAATAACCAGACTGCTAAGTCGAGTGGCACCAGCAGTGTCTATGTGA ATGTGCCGTCTTTCTCCAGCATGAGCACCAGTTCCTGCTCCATTAACCAG CCACAATCCTCACCAGCAGCTGTGATTCCAGTTCAGGCACCTCTTCCAGT TCCAGTTCCTGCCCCTGTTTCCGTTCCAGCCGTTCCAGTTCCAATACCAG CGGTCGTTACCCATCTGCGTCCTTTGCTGCCCATTGCCGATAATGCGTAT GTGCAAATCTCCCAAGATCGCTGCTCAGATTTCACACCGGACGACGAGGA GGAACCCGTGGTGTTGCGTGATGCCGATGTGGTGGCAGACGGAATCGGTA TACCTACCCCTGCGAAACCCAAGAAGGAGAAGTCCAATCTGGCTGTAAGG GTTCTGCCGGGAAAGCTCACCCAAAAGGTAAAGGGGCATTCGTACAAAAA AGTAAGCGCGGCTGCCCTTGGATCCACCAGTTCCCTTAGTTCCGGCAGCA AGCAGAAGCACCAGCGATTGCAGTACCAGTCCCACGATGATGACGACGAC GAACAGGATCAGGATGAGAATCGAGGTGCTGGAGGCGGCCGCAATTTCCA ATCAAACACCATTCAAAATTCTGCCAAAACCGGCTTCAGCAACATGAGCT TTGAGGACTTTCCCTCGGATCAGGAAATGGATCGTCTGTCCAGGACCATT CCCTTCGAGGTGGTTAGAAACGAAAAGATGTTACTCGAGGCGGAGAAGAA GTTCGGCTCCCTCAAGCGACGGAACAACTTGTTCTCATAATGTGGACAGT GGGGCGAGACCATCAAGGAGACCTGAGACTGAGTGTTTCAAATTATGTTG ACATTTCGTTTAAGCTTTTCTCCGTTCCGTTTTTAATGTGGGGTTCCAAA AATAACCAATATCTGTATTTTTTGAATATAGTATTTATTCGCGTGTAGCA ATGTTAAAAAGTGGCTAGTACCCATACATATTATACACACAACAAGAACA ATACCTATAACTGTTATTTAGTGCAAAAATTTAAACTAGTTTTAGAAGCG AAACATGTTTTAGAATTTATACAGTGCGTAAGTTTACCAAAGTTACATTT ATTTTTGTGGCATTTTTCAGCTTGAAGTATTTCATGAATTATATATTTAT ACAAAACTATGTGATTATACACCCACACCCAATAACAACCAAAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Nak-RA | 5400 | Nak-RA | 1931..5236 | 1..3306 | 16530 | 100 | Plus |
Nak-RB | 3362 | Nak-RB | 49..3354 | 1..3306 | 16530 | 100 | Plus |
Nak.b | 4808 | Nak.b | 1928..3672 | 1..1745 | 8725 | 100 | Plus |
Nak.b | 4808 | Nak.b | 3741..4800 | 2247..3306 | 5300 | 100 | Plus |
Nak.b | 4808 | Nak.b | 3672..3743 | 1802..1873 | 360 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 18956579..18959361 | 3290..508 | 13840 | 99.8 | Minus |
chr2L | 23010047 | chr2L | 18961849..18962127 | 279..1 | 1395 | 100 | Minus |
chr2L | 23010047 | chr2L | 18961564..18961794 | 509..279 | 1155 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 18957884..18960682 | 3306..508 | 13995 | 100 | Minus |
2L | 23513712 | 2L | 18963170..18963448 | 279..1 | 1395 | 100 | Minus |
2L | 23513712 | 2L | 18962885..18963115 | 509..279 | 1155 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 18957884..18960682 | 3306..508 | 13995 | 100 | Minus |
2L | 23513712 | 2L | 18963170..18963448 | 279..1 | 1395 | 100 | Minus |
2L | 23513712 | 2L | 18962885..18963115 | 509..279 | 1155 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Stalker2 | 7672 | Stalker2 STALKER2 7672bp | 6941..6995 | 3251..3198 | 119 | 70.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 18956579..18959359 | 510..3290 | 99 | <- | Minus |
chr2L | 18961564..18961794 | 279..509 | 100 | <- | Minus |
chr2L | 18961850..18962127 | 1..278 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nak-RA | 1578..4467 | 1..2890 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nak-RA | 1578..4467 | 1..2890 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nak-RA | 1578..4467 | 1..2890 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nak-RA | 1578..4467 | 1..2890 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nak-RA | 1578..4467 | 1..2890 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nak-RB | 49..3338 | 1..3290 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nak-RB | 49..3338 | 1..3290 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nak-RA | 1907..5196 | 1..3290 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nak-RB | 49..3319 | 1..3271 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nak-RA | 1907..5196 | 1..3290 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18957900..18960680 | 510..3290 | 100 | <- | Minus |
2L | 18962885..18963115 | 279..509 | 100 | <- | Minus |
2L | 18963171..18963448 | 1..278 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18957900..18960680 | 510..3290 | 100 | <- | Minus |
2L | 18962885..18963115 | 279..509 | 100 | <- | Minus |
2L | 18963171..18963448 | 1..278 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18957900..18960680 | 510..3290 | 100 | <- | Minus |
2L | 18962885..18963115 | 279..509 | 100 | <- | Minus |
2L | 18963171..18963448 | 1..278 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 18957900..18960680 | 510..3290 | 100 | <- | Minus |
arm_2L | 18962885..18963115 | 279..509 | 100 | <- | Minus |
arm_2L | 18963171..18963448 | 1..278 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18957900..18960680 | 510..3290 | 100 | <- | Minus |
2L | 18962885..18963115 | 279..509 | 100 | <- | Minus |
2L | 18963171..18963448 | 1..278 | 100 | Minus |
Translation from 0 to 2889
> LD33980.hyp QFLAPFNNNLAAMGDGQQTLASAASNPGIYASSTANSAAVSISELMKPGQ TAVEKRVEAWNPFEEEQPFSQMTEDHIFEAEFDKIRQRGSQGSITAKSAS TTSTLTPTEQIPSAVVAPVTAAPGAVPPPPIAAAVSPYPSQVSEDPFGSA PFSLPPGLREKASSLRKTGAKFIGVSSGGTGGGVATPIGLVAGGANTATS SNSSKWMLSPTLEVSSEEKTSLISKLKTDSECGIPGAVGGAGEGVSGYVK LPVEDRNKYEKLRSKDQPTSDDSDSEASEFFQQDSDEGGGGIFRQMQMVT SNLPETIHKIQQVAYHKVDKTAHLPIVKKLRDKTKKPTTAAHQAAQQLNL MAAAVAAQAEEAAKAAESDGDSIGSASDLRAEDDDLFDENPRQTQAKQRR PLPTEMDGISESVKTCSSSAYHAECESVTTHEDDVRSRVVVKVRMRKKDR ALVTATGDPSAPSEELSPTSSDLLHKFGDRPLLLDDELDYGSGESKSSTE SPVAPILPTNPDVQESEEDVFALAPFKLPVGVPLKRKTKPKAKPKPSEPE MWTSTPVKSAAVGDPSTNFASFPAQLTPTNNVGNSAQLDEFNEPIFNPFQ ENAQNTQSGETNQCDLFGLEPFPQVIRTIEQNPQHHQIHQFPSHNNNNNV IKVPASVSVALPASVPVSVSVNSSAPQLVTINHSIIINKTPEPPMNYNNN NNNQTAKSSGTSSVYVNVPSFSSMSTSSCSINQPQSSPAAVIPVQAPLPV PVPAPVSVPAVPVPIPAVVTHLRPLLPIADNAYVQISQDRCSDFTPDDEE EPVVLRDADVVADGIGIPTPAKPKKEKSNLAVRVLPGKLTQKVKGHSYKK VSAAALGSTSSLSSGSKQKHQRLQYQSHDDDDDEQDQDENRGAGGGRNFQ SNTIQNSAKTGFSNMSFEDFPSDQEMDRLSRTIPFEVVRNEKMLLEAEKK FGSLKRRNNLFS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Nak-PD | 1488 | CG10637-PD | 527..1488 | 1..962 | 4921 | 100 | Plus |
Nak-PA | 1488 | CG10637-PA | 527..1488 | 1..962 | 4921 | 100 | Plus |
Nak-PC | 698 | CG10637-PC | 527..697 | 1..171 | 859 | 99.4 | Plus |
Nak-PE | 708 | CG10637-PE | 527..695 | 1..169 | 854 | 100 | Plus |
Translation from 37 to 2889
> LD33980.pep MGDGQQTLASAASNPGIYASSTANSAAVSISELMKPGQTAVEKRVEAWNP FEEEQPFSQMTEDHIFEAEFDKIRQRGSQGSITAKSASTTSTLTPTEQIP SAVVAPVTAAPGAVPPPPIAAAVSPYPSQVSEDPFGSAPFSLPPGLREKA SSLRKTGAKFIGVSSGGTGGGVATPIGLVAGGANTATSSNSSKWMLSPTL EVSSEEKTSLISKLKTDSECGIPGAVGGAGEGVSGYVKLPVEDRNKYEKL RSKDQPTSDDSDSEASEFFQQDSDEGGGGIFRQMQMVTSNLPETIHKIQQ VAYHKVDKTAHLPIVKKLRDKTKKPTTAAHQAAQQLNLMAAAVAAQAEEA AKAAESDGDSIGSASDLRAEDDDLFDENPRQTQAKQRRPLPTEMDGISES VKTCSSSAYHAECESVTTHEDDVRSRVVVKVRMRKKDRALVTATGDPSAP SEELSPTSSDLLHKFGDRPLLLDDELDYGSGESKSSTESPVAPILPTNPD VQESEEDVFALAPFKLPVGVPLKRKTKPKAKPKPSEPEMWTSTPVKSAAV GDPSTNFASFPAQLTPTNNVGNSAQLDEFNEPIFNPFQENAQNTQSGETN QCDLFGLEPFPQVIRTIEQNPQHHQIHQFPSHNNNNNVIKVPASVSVALP ASVPVSVSVNSSAPQLVTINHSIIINKTPEPPMNYNNNNNNQTAKSSGTS SVYVNVPSFSSMSTSSCSINQPQSSPAAVIPVQAPLPVPVPAPVSVPAVP VPIPAVVTHLRPLLPIADNAYVQISQDRCSDFTPDDEEEPVVLRDADVVA DGIGIPTPAKPKKEKSNLAVRVLPGKLTQKVKGHSYKKVSAAALGSTSSL SSGSKQKHQRLQYQSHDDDDDEQDQDENRGAGGGRNFQSNTIQNSAKTGF SNMSFEDFPSDQEMDRLSRTIPFEVVRNEKMLLEAEKKFGSLKRRNNLFS *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14645-PA | 1495 | GF14645-PA | 550..1495 | 1..950 | 3077 | 77.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21669-PA | 1483 | GG21669-PA | 539..1483 | 1..950 | 3959 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11600-PA | 1580 | GH11600-PA | 584..1580 | 1..950 | 2346 | 63.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Nak-PD | 1488 | CG10637-PD | 539..1488 | 1..950 | 4859 | 100 | Plus |
Nak-PA | 1488 | CG10637-PA | 539..1488 | 1..950 | 4859 | 100 | Plus |
Nak-PC | 698 | CG10637-PC | 539..697 | 1..159 | 797 | 99.4 | Plus |
Nak-PE | 708 | CG10637-PE | 539..695 | 1..157 | 792 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17169-PA | 1521 | GI17169-PA | 566..1521 | 2..950 | 2359 | 62.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19623-PA | 1534 | GL19623-PA | 562..1534 | 1..950 | 2859 | 70.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10457-PA | 1534 | GA10457-PA | 562..1534 | 1..950 | 2840 | 70.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17048-PA | 1378 | GM17048-PA | 538..1149 | 1..612 | 2764 | 98.5 | Plus |
Dsec\GM17048-PA | 1378 | GM17048-PA | 1149..1378 | 721..950 | 965 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21795-PA | 1516 | GD21795-PA | 539..1484 | 1..950 | 4895 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17674-PA | 1515 | GJ17674-PA | 560..1515 | 2..950 | 2408 | 63.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24682-PA | 1553 | GK24682-PA | 568..1553 | 2..950 | 2479 | 66.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12690-PA | 1479 | GE12690-PA | 539..1479 | 1..950 | 3932 | 93.3 | Plus |