BDGP Sequence Production Resources |
Search the DGRC for LD34072
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 340 |
Well: | 72 |
Vector: | pOT2 |
Associated Gene/Transcript | Pep-RC |
Protein status: | LD34072.pep: gold |
Preliminary Size: | 3083 |
Sequenced Size: | 2657 |
Gene | Date | Evidence |
---|---|---|
CG6143 | 2001-01-01 | Release 2 assignment |
CG6143 | 2002-05-20 | Blastp of sequenced clone |
Pep | 2008-04-29 | Release 5.5 accounting |
Pep | 2008-08-15 | Release 5.9 accounting |
Pep | 2008-12-18 | 5.12 accounting |
2657 bp (2657 high quality bases) assembled on 2002-05-20
GenBank Submission: AY118552
> LD34072.complete CGTAATATTGGATAGGCGGAGTGTTTAGACAAGGGCGGCCATCTTTCTGA AGTGAGGAAAACTGTAGTCCAAGTAGTCCAGTCATTTTGACAAATCGCCG TTGCAACACCGTAAAGGTCAACGGAAATCCGCAGAATCGTTTAGTGAATA ACGCAAAGGTCAACGGCAACATGGCTTTCCGTGGTAACCAGAACCGCAAC CGCAATTTTGGAGGTGGCAACAACAACTATGGTGGACCCATGGGCGCCAA CCGCATGGGCGGTATGAACATGTCGCCTTGGGAATCGCAGAATCCCGGCG GCGGACAGTTTGGTAACAACATGCGACAGGGTGGCGGTCAGATGAACGCC CAGGCCATCAACTTGGCCAACAATCTGCTGAACAATCTGTTCAGGAACCA GAATCCACCATCGCTTCTCGACTTGCCCCGCGGCGGCGGTGGCATGGGAA ATCGCAACCAACGTGGTGGCCCGATGGTCAGTCGCGGCGGCGGTGCCGGC AATCGTCTCAATAACCGTCGTGGCCAGGGAGGTGGCTTCCAAAATCGTGG CGCCACTGGTAGTGGACCCAAGCCCCCGCCAAAGCAGGGCGGCGGCGGTA TTCGCAAGCAAAATGCTTTTGATCGTGCCAAGAAACTTTTGGCTAAAAAT GCCAACCAAAATAAAAAGAAGGAACCCACTCCTGGCGAAAAGAAAATCGA GAGCCCTACCAAGGAGTCTCCATACGCTAGTGTGCCGAACGACATGTTCT ACTGCCATCTGTGCAAGAAGCACATGTGGGATGCCAACTCTTTCGAGAAC CACATCAAGGGCCGCACCCATCTGATGATGCGTGAGGGCATTGAGGAGAG CTATCGCCTCAAGGCCAACATGATCCGTCAGGAGGCTAAGATCGCAGAGC AGCTCAAGTCGATCGAGTTTGACCGCTTGAAGCGCATGGGCAAAAGCAAG CAGCGTCAGCTGGACTACTGCACCATGTGCGACCTGAACTTCCATGGTCA CATCTCGACCCATCGCAAGTCGGAGGGACATTTGCAGCTGAAGAAGTTCT TGCACCCCAAGTGCATTGAGTGCAACAAGGAGTTCGCCACTCGCATTGAC TACGATACTCATCTGCTGTCCGCCGAGCATCTGAAGAAGGCTGCCGAGAA CAACACCAAGGTGGGTGAGCGCAAGCGCCAGACCTTGCCCATCAGCACCG AAGAAGAGGAGACCCGCGATTTGCGCCTGCCCCAGAAGCGCAAGAAGAAG CCGGTCAAGAAGGAGGGCGAAGCAGCCGATGGCGAGGCTAAGAAGGAGGG TGCCGGCGATGGCGAGGGTGCCGAAGGTGATGAAGCCGAGGGAGAAGAGG CCAAGGAGGGTGAGGAAGCTGCTGACGAGACAAAGGAGGGCGATGAGCTA AACGAGAGCCAAGAGGAAGAGGAAGTGGCACTGCCCGTGGACCCCGAGGA CTGCATCCTTGACTTCAACGACGGCGATGAGATCCCCAGCGAGGTGGATA CCCGCCTACCTAAGTACAACTGGCAGCGTGCTGTCGGTCCCGGTCTGATC TCCAAGCTGGAGTGCTATGAGTGCTCGGTGTGCAGCAAGTTCTTCGACAC CGAGGTGACCGCCGAGATTCACTCCCGTACGGCGACTCATCACCGCAACT TCTTGAAGTTTATCAACGAGAAATCAAGCGATACCAAGATCGCACAGAAG CGCGCAGCTGCCGCCCTGGAGGAGAATGAGCGTAAGAAGCGCAAGGTTGA GGAGGCAGAGGCTCCGGCTGCCGAGGGCGCAGCCGAGGAAACCACCGAAG GCGCTGAGGGTGAGCTGTACGATCCATCGGAAGCCACTGGCGATGACGAG GACGTGGAGATGGTGGATGATAATGCTGAGGGCGAGGGCGAAGGCGAAGG TGACGAGGAAGCCGAGGCTGAGGTCGAGGAAGATGGCGCCGGCCAGGACA ACGGCGAAGAGGAGATGGAAGCCCAGGAGGAAGAGGGTCAGGAGGGCGAG CAAGAGCCCGAACCTGAGCCAGCTCCAGTCCAAACTCCTGCCCCGGCTGA ACCTGCACCACCAGCCAAGACCCCAGCCAAGACTCCGACCAAGGCAGCTG CTCCAGCCGCTGTTGCCAGTCCCGCAGCTGCGGCAACGTCGGCAGACGCC TCTCCATCTCCGGCCAAGAAGGCAACGCCTGCTCGCGCTGCCGCCGGAGC CAAGGCCACGCCGCAGCGACAACGCGCCCGCGGTCGCTACAATCGCTACT AAGTAGACGTCGAAGGAATTCGTAATTTAACATAACATAAACCTTAATAT ACAAGAAAAAATTTACATTCACGCCCAGGAGGAGGATGAAGAAAGAACAG ATCAAATCGATCTCTTCCCGCAATTTGACATTTGCATCCCAATTTGCATA TACACTGAATGAATGGAAACTGAGAAGAAGACGGTCAACTTTTAGTTGAA ACAGTTGAATATATTGTACGACGAAGCTTCTTGAAACTGACGAGGGAGAA CACAAACAAGTTAATTGAATCGAGAATCGTATTACCTACCCGATTCCCCC CTCACAGAACGCATACCATGCCAGCCAGCGAACCAACCATTCAACTTATG TAATCATATAAATTCTATAATAAACAAAGAAACAAAACTAAAAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pep-RC | 2970 | Pep-RC | 170..2809 | 1..2640 | 13200 | 100 | Plus |
Pep-RB | 2985 | Pep-RB | 328..2858 | 110..2640 | 12655 | 100 | Plus |
Pep-RA | 2637 | Pep-RA | 539..2476 | 703..2640 | 9690 | 100 | Plus |
Pep-RA | 2637 | Pep-RA | 67..539 | 1..473 | 2365 | 100 | Plus |
Pep-RB | 2985 | Pep-RB | 118..227 | 1..110 | 550 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 17627699..17629636 | 2639..702 | 9690 | 100 | Minus |
chr3L | 24539361 | chr3L | 17632958..17633321 | 473..110 | 1820 | 100 | Minus |
chr3L | 24539361 | chr3L | 17630614..17630844 | 703..473 | 1155 | 100 | Minus |
chr3L | 24539361 | chr3L | 17634486..17634594 | 109..1 | 545 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 17638117..17640055 | 2640..702 | 9695 | 100 | Minus |
3L | 28110227 | 3L | 17643363..17643726 | 473..110 | 1820 | 100 | Minus |
3L | 28110227 | 3L | 17641026..17641256 | 703..473 | 1155 | 100 | Minus |
3L | 28110227 | 3L | 17644891..17644999 | 109..1 | 545 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 17631217..17633155 | 2640..702 | 9695 | 100 | Minus |
3L | 28103327 | 3L | 17636463..17636826 | 473..110 | 1820 | 100 | Minus |
3L | 28103327 | 3L | 17634126..17634356 | 703..473 | 1155 | 100 | Minus |
3L | 28103327 | 3L | 17637991..17638099 | 109..1 | 545 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 17627699..17629634 | 704..2639 | 100 | <- | Minus |
chr3L | 17630614..17630843 | 474..703 | 100 | <- | Minus |
chr3L | 17632958..17633321 | 110..473 | 100 | <- | Minus |
chr3L | 17634486..17634594 | 1..109 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pep-RB | 2..2151 | 102..2252 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pep-RB | 2..2151 | 102..2252 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pep-RB | 2..2151 | 102..2252 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pep-RB | 2..2151 | 102..2252 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pep-RB | 2..2151 | 102..2252 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pep-RC | 33..2671 | 1..2639 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pep-RC | 54..2692 | 1..2639 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pep-RC | 38..2676 | 1..2639 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pep-RC | 33..2671 | 1..2639 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pep-RC | 38..2676 | 1..2639 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17638118..17640053 | 704..2639 | 100 | <- | Minus |
3L | 17641026..17641255 | 474..703 | 100 | <- | Minus |
3L | 17643363..17643726 | 110..473 | 100 | <- | Minus |
3L | 17644891..17644999 | 1..109 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17638118..17640053 | 704..2639 | 100 | <- | Minus |
3L | 17641026..17641255 | 474..703 | 100 | <- | Minus |
3L | 17643363..17643726 | 110..473 | 100 | <- | Minus |
3L | 17644891..17644999 | 1..109 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17638118..17640053 | 704..2639 | 100 | <- | Minus |
3L | 17641026..17641255 | 474..703 | 100 | <- | Minus |
3L | 17643363..17643726 | 110..473 | 100 | <- | Minus |
3L | 17644891..17644999 | 1..109 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 17631218..17633153 | 704..2639 | 100 | <- | Minus |
arm_3L | 17634126..17634355 | 474..703 | 100 | <- | Minus |
arm_3L | 17636463..17636826 | 110..473 | 100 | <- | Minus |
arm_3L | 17637991..17638099 | 1..109 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17631218..17633153 | 704..2639 | 100 | <- | Minus |
3L | 17634126..17634355 | 474..703 | 100 | <- | Minus |
3L | 17636463..17636826 | 110..473 | 100 | <- | Minus |
3L | 17637991..17638099 | 1..109 | 100 | Minus |
Translation from 170 to 2251
> LD34072.pep MAFRGNQNRNRNFGGGNNNYGGPMGANRMGGMNMSPWESQNPGGGQFGNN MRQGGGQMNAQAINLANNLLNNLFRNQNPPSLLDLPRGGGGMGNRNQRGG PMVSRGGGAGNRLNNRRGQGGGFQNRGATGSGPKPPPKQGGGGIRKQNAF DRAKKLLAKNANQNKKKEPTPGEKKIESPTKESPYASVPNDMFYCHLCKK HMWDANSFENHIKGRTHLMMREGIEESYRLKANMIRQEAKIAEQLKSIEF DRLKRMGKSKQRQLDYCTMCDLNFHGHISTHRKSEGHLQLKKFLHPKCIE CNKEFATRIDYDTHLLSAEHLKKAAENNTKVGERKRQTLPISTEEEETRD LRLPQKRKKKPVKKEGEAADGEAKKEGAGDGEGAEGDEAEGEEAKEGEEA ADETKEGDELNESQEEEEVALPVDPEDCILDFNDGDEIPSEVDTRLPKYN WQRAVGPGLISKLECYECSVCSKFFDTEVTAEIHSRTATHHRNFLKFINE KSSDTKIAQKRAAAALEENERKKRKVEEAEAPAAEGAAEETTEGAEGELY DPSEATGDDEDVEMVDDNAEGEGEGEGDEEAEAEVEEDGAGQDNGEEEME AQEEEGQEGEQEPEPEPAPVQTPAPAEPAPPAKTPAKTPTKAAAPAAVAS PAAAATSADASPSPAKKATPARAAAGAKATPQRQRARGRYNRY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23899-PA | 713 | GF23899-PA | 28..583 | 1..557 | 2294 | 88.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15796-PA | 713 | GG15796-PA | 24..713 | 1..693 | 2610 | 94.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15349-PA | 737 | GH15349-PA | 32..590 | 1..566 | 2382 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pep-PD | 693 | CG6143-PD | 1..693 | 1..693 | 3669 | 100 | Plus |
Pep-PC | 693 | CG6143-PC | 1..693 | 1..693 | 3669 | 100 | Plus |
Pep-PB | 716 | CG6143-PB | 24..716 | 1..693 | 3669 | 100 | Plus |
Pep-PA | 109 | CG6143-PA | 1..101 | 1..101 | 561 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12952-PA | 741 | GI12952-PA | 33..589 | 1..562 | 2319 | 90.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25230-PA | 293 | GL25230-PA | 1..291 | 234..527 | 1222 | 91.8 | Plus |
Dper\GL25229-PA | 218 | GL25229-PA | 33..217 | 1..177 | 844 | 93 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23732-PA | 738 | GA23732-PA | 33..738 | 1..693 | 2325 | 84.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24320-PA | 304 | GM24320-PA | 1..105 | 1..105 | 569 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12391-PA | 716 | GD12391-PA | 24..716 | 1..693 | 3626 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13096-PA | 723 | GJ13096-PA | 31..585 | 1..562 | 2285 | 91.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22509-PA | 685 | GK22509-PA | 1..685 | 1..693 | 2330 | 75.7 | Plus |
Dwil\GK10796-PA | 766 | GK10796-PA | 36..666 | 1..604 | 2192 | 82.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22133-PA | 715 | GE22133-PA | 24..588 | 1..565 | 2412 | 98.1 | Plus |
Translation from 170 to 2251
> LD34072.hyp MAFRGNQNRNRNFGGGNNNYGGPMGANRMGGMNMSPWESQNPGGGQFGNN MRQGGGQMNAQAINLANNLLNNLFRNQNPPSLLDLPRGGGGMGNRNQRGG PMVSRGGGAGNRLNNRRGQGGGFQNRGATGSGPKPPPKQGGGGIRKQNAF DRAKKLLAKNANQNKKKEPTPGEKKIESPTKESPYASVPNDMFYCHLCKK HMWDANSFENHIKGRTHLMMREGIEESYRLKANMIRQEAKIAEQLKSIEF DRLKRMGKSKQRQLDYCTMCDLNFHGHISTHRKSEGHLQLKKFLHPKCIE CNKEFATRIDYDTHLLSAEHLKKAAENNTKVGERKRQTLPISTEEEETRD LRLPQKRKKKPVKKEGEAADGEAKKEGAGDGEGAEGDEAEGEEAKEGEEA ADETKEGDELNESQEEEEVALPVDPEDCILDFNDGDEIPSEVDTRLPKYN WQRAVGPGLISKLECYECSVCSKFFDTEVTAEIHSRTATHHRNFLKFINE KSSDTKIAQKRAAAALEENERKKRKVEEAEAPAAEGAAEETTEGAEGELY DPSEATGDDEDVEMVDDNAEGEGEGEGDEEAEAEVEEDGAGQDNGEEEME AQEEEGQEGEQEPEPEPAPVQTPAPAEPAPPAKTPAKTPTKAAAPAAVAS PAAAATSADASPSPAKKATPARAAAGAKATPQRQRARGRYNRY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pep-PD | 693 | CG6143-PD | 1..693 | 1..693 | 3669 | 100 | Plus |
Pep-PC | 693 | CG6143-PC | 1..693 | 1..693 | 3669 | 100 | Plus |
Pep-PB | 716 | CG6143-PB | 24..716 | 1..693 | 3669 | 100 | Plus |
Pep-PA | 109 | CG6143-PA | 1..101 | 1..101 | 561 | 100 | Plus |