BDGP Sequence Production Resources |
Search the DGRC for LD34105
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 341 |
Well: | 5 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3238-RA |
Protein status: | LD34105.pep: gold |
Preliminary Size: | 2820 |
Sequenced Size: | 2530 |
Gene | Date | Evidence |
---|---|---|
CG3238 | 2001-01-01 | Release 2 assignment |
CG3238 | 2001-09-19 | Blastp of sequenced clone |
CG3238 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3238 | 2008-04-29 | Release 5.5 accounting |
CG3238 | 2008-08-15 | Release 5.9 accounting |
CG3238 | 2008-12-18 | 5.12 accounting |
2530 bp (2530 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058641
> LD34105.complete ATCGGCGACCAAGCGCATGGAAAAGATTTGGCTTTTGTATTTAATTTAAT TTAATCGGAAACTGACTGAAGTGAAGTTAATTTCGCCATGGATCTCAATG ACGCAGTGCTCACCTGTGCGGTGAACATGGAGTGGACCAATGCGGTGGGC ATCACGGGTCGCAAACTGGCCTACAAGACTGCCACATTGCGCCTGGTGCG GAACGATTTGCGTGAATTGTTTGTTGAGGTGACGCCGGAGAAACTAAAGC CCCTGAAGTTCAAGCTGAAGGATCTGATGGTGCACAAGAAGTTCATGTCC GAGGGCAAGGCCACCTTCAACTTCAAGGCGGAGAAGTGCACCCTCTATCT ATCGAATGCACCGCCGGGGACTTTGATGTTCTTCCTGCGGACGATCTTCG TTAAAATGAACGGAAACGAGGGAGGATCCCAGCCGGACGATGCGACCTTG CAGAAGAAACTCCGCGAGCACCTGATGTCAGGCAAGCCAAGCAGCTTTAA CGACGTTTCTCCAGTCACCACGGCCGAGATGATTTTGGCGCGCAAAAAGG CGGGTTTGTTGTCCAAGGGGTCAGTGACCACGCCGTCGCCCCAGGGCGCC AAAAAGCGTCGCTTCGAGGAGCTCAAGGAGGAGAAGGAACGGGGCACCAT GCCCGCGGCCAAGAAACTATATGCGTCGACTACCGACGAGTCGCTGAGAC TCAGTGAGGAGCAAATGGAAGTCCTGCGGGCGTGCACCTCGGGCAAGAGC GTATTCTTCACCGGTTCAGCAGGCACTGGCAAGAGTTTCTTGCTCCGCAG GATCATCTCAGCCCTGCCGCCCGATGGAACGGTGGCCACGGCCTCCACGG GAGTGGCAGCCTGCCTGATCGGTGGGACCACCTTGCACGCCTTCGCTGGC ATAGGAGGAGGAGACGCCACCATGCAGCGGTGTCTGGAGCTGGCTTCCCG ACCCGCAAATGCCCAGACGTGGAGGAAGTGCAAGCGGTTGATTATTGACG AGATCTCCATGGTGGACGGACAGTTCTTTGAGAAAATTGAAGCCGTCGCA CGTCACATTCGGCGCAATGATCGCCCCTTTGGCGGCATACAGCTCATCCT GTGTGGTGACTTCTTGCAACTGCCTCCGGTCATAAAGGGAGATTTTGGTG CAGCCCCCACTGCCACGCCCCAGCAACGATTCTGCTTTCAGTCCTCCGCA TGGGAGACTTGCATCCAGTGTGTCTACGAACTGAAGCAAGTGCATCGGCA ATCGGATCCGGAGTTTGTAAAGATTCTGAACCACCTCCGAATTGGCCATG TGAACGATTCCATAACCAGTCGACTTGCAGCTACATCAAAGCAGAAAATT GAGGGAAACGGCATTCTGGCCACTCAACTCTGCTCCCACACAAACGATGC GAACTCCATTAACGAGTCCAAGCTGGAAAACCTCGATGGCGACAAGATTT TATTCAAGGCTGACGACTCCGATGCCAGCATGACCAGGACACTGGATCAA CAGATCCAGGCTCCATCTCAGTTGTACCTAAAAGTTAACGCCCAAGTAAT GCTACTCAAGAATATAAACATATCCAATGGACTGGTGAACGGAGCTCGAG GCGTCGTTGTAAGAATGGAGAAGGATCTGCCAGTGGTAAGGTTCAAAAAC AACCAGGAATACGTTTGCAAGCACGAAAGGTGGATAATAAAGACCGCCTC AGGAAACCATATAACACGACGCCAAGTGCCACTGAAGTTAGCCTGGGCAT TTTCCATACACAAGAGTCAGGGACTAACCCTCGACTGCGTGGAGATGTCC CTTTCCAAAGTATTTGAGGCTGGACAGGCCTATGTGGCCTTATCCCGTGC GAAATCCCTGCAGTCCATTCGCATCCTGGACTTTGACGCCAAGCAAGTGT GGGCCAATCCACACGTGCTGCAGTTCTACAAGGGATTCAGACGCAAGCTA ATGGACACAACCATGATACCATTGGGTCCCAAAAACAAGGACAAGAAGCC AGGAGACAAGGCCGCAAATAGCGCTCTGGCTAAGCTCAAAAAGAGTCTCA TCAACAAGCCGCTGGTCTCGATTAGCTGAGCTCGAAAGTAATCTAAGATA GCGTAATTCTAGAAAGCTTGAACAAATTTCACTATTGCCTATCTATTGGT ATCTATTTCTAAAAGTGTAATTTTTTCTTTTTTTAAGAAAAGCAAATGAT TTATGGACTGTGCATTCCTTTTTTTAAAAAATGAGAAATTATGGAACTCT TTTTGAAATTGTCTAAATTTTCGAAAAAGTCTGAAGAATTACAGTGTGAG TTTTATGATTTATCACTATATTCTGTAAACTTATTGCAGTACGCAGGCAA AAACTTTATTTTACTCACTGGAACAACTTAACCAAGGCTCTTAATCTTGA GAACTATTAGTTTTAAGCTAGTCTATAGCCAAAATTCTATATCAAACGCC AATATTAATATTTATTTTAAGAAAAACATGACTAAGAATAAATGCAACTA ATAGACAAAAACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3238-RA | 2732 | CG3238-RA | 145..2653 | 1..2509 | 12545 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 3467000..3468480 | 1033..2512 | 98 | <- | Minus |
chr2L | 3468533..3469564 | 1..1032 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3238-RA | 1..1992 | 88..2079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3238-RA | 1..1992 | 88..2079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3238-RA | 1..1992 | 88..2079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3238-RA | 1..1992 | 88..2079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3238-RA | 1..1992 | 88..2079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3238-RA | 27..2535 | 1..2512 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3238-RA | 27..2535 | 1..2512 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3238-RB | 24..2532 | 1..2512 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3238-RA | 27..2535 | 1..2512 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3238-RB | 24..2532 | 1..2512 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 3467416..3468897 | 1033..2512 | 99 | <- | Minus |
2L | 3468950..3469981 | 1..1032 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 3467416..3468897 | 1033..2512 | 99 | <- | Minus |
2L | 3468950..3469981 | 1..1032 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 3467416..3468897 | 1033..2512 | 99 | <- | Minus |
2L | 3468950..3469981 | 1..1032 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 3467416..3468897 | 1033..2512 | 99 | <- | Minus |
arm_2L | 3468950..3469981 | 1..1032 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 3467416..3468897 | 1033..2512 | 99 | <- | Minus |
2L | 3468950..3469981 | 1..1032 | 100 | Minus |
Translation from 87 to 2078
> LD34105.pep MDLNDAVLTCAVNMEWTNAVGITGRKLAYKTATLRLVRNDLRELFVEVTP EKLKPLKFKLKDLMVHKKFMSEGKATFNFKAEKCTLYLSNAPPGTLMFFL RTIFVKMNGNEGGSQPDDATLQKKLREHLMSGKPSSFNDVSPVTTAEMIL ARKKAGLLSKGSVTTPSPQGAKKRRFEELKEEKERGTMPAAKKLYASTTD ESLRLSEEQMEVLRACTSGKSVFFTGSAGTGKSFLLRRIISALPPDGTVA TASTGVAACLIGGTTLHAFAGIGGGDATMQRCLELASRPANAQTWRKCKR LIIDEISMVDGQFFEKIEAVARHIRRNDRPFGGIQLILCGDFLQLPPVIK GDFGAAPTATPQQRFCFQSSAWETCIQCVYELKQVHRQSDPEFVKILNHL RIGHVNDSITSRLAATSKQKIEGNGILATQLCSHTNDANSINESKLENLD GDKILFKADDSDASMTRTLDQQIQAPSQLYLKVNAQVMLLKNINISNGLV NGARGVVVRMEKDLPVVRFKNNQEYVCKHERWIIKTASGNHITRRQVPLK LAWAFSIHKSQGLTLDCVEMSLSKVFEAGQAYVALSRAKSLQSIRILDFD AKQVWANPHVLQFYKGFRRKLMDTTMIPLGPKNKDKKPGDKAANSALAKL KKSLINKPLVSIS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14672-PA | 663 | GF14672-PA | 1..663 | 1..663 | 3237 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24437-PA | 663 | GG24437-PA | 1..663 | 1..663 | 3454 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11550-PA | 660 | GH11550-PA | 1..660 | 1..663 | 2940 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pif1-PB | 663 | CG3238-PB | 1..663 | 1..663 | 3397 | 100 | Plus |
Pif1-PA | 663 | CG3238-PA | 1..663 | 1..663 | 3397 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17040-PA | 659 | GI17040-PA | 1..659 | 1..663 | 2975 | 82.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19477-PA | 664 | GL19477-PA | 1..664 | 1..663 | 3201 | 90.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16856-PA | 664 | GA16856-PA | 1..664 | 1..663 | 3201 | 90.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11131-PA | 663 | GM11131-PA | 1..663 | 1..663 | 3540 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22755-PA | 663 | GD22755-PA | 1..663 | 1..663 | 3540 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24695-PA | 664 | GJ24695-PA | 1..664 | 1..663 | 2933 | 82.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23961-PA | 670 | GK23961-PA | 1..670 | 1..663 | 3070 | 84.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14865-PA | 663 | GE14865-PA | 1..663 | 1..663 | 3482 | 97.6 | Plus |
Translation from 87 to 2078
> LD34105.hyp MDLNDAVLTCAVNMEWTNAVGITGRKLAYKTATLRLVRNDLRELFVEVTP EKLKPLKFKLKDLMVHKKFMSEGKATFNFKAEKCTLYLSNAPPGTLMFFL RTIFVKMNGNEGGSQPDDATLQKKLREHLMSGKPSSFNDVSPVTTAEMIL ARKKAGLLSKGSVTTPSPQGAKKRRFEELKEEKERGTMPAAKKLYASTTD ESLRLSEEQMEVLRACTSGKSVFFTGSAGTGKSFLLRRIISALPPDGTVA TASTGVAACLIGGTTLHAFAGIGGGDATMQRCLELASRPANAQTWRKCKR LIIDEISMVDGQFFEKIEAVARHIRRNDRPFGGIQLILCGDFLQLPPVIK GDFGAAPTATPQQRFCFQSSAWETCIQCVYELKQVHRQSDPEFVKILNHL RIGHVNDSITSRLAATSKQKIEGNGILATQLCSHTNDANSINESKLENLD GDKILFKADDSDASMTRTLDQQIQAPSQLYLKVNAQVMLLKNINISNGLV NGARGVVVRMEKDLPVVRFKNNQEYVCKHERWIIKTASGNHITRRQVPLK LAWAFSIHKSQGLTLDCVEMSLSKVFEAGQAYVALSRAKSLQSIRILDFD AKQVWANPHVLQFYKGFRRKLMDTTMIPLGPKNKDKKPGDKAANSALAKL KKSLINKPLVSIS*